RNA–Protein interactions for RNA: ENST00000570676.1

RAB40B-203, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-203ENST00000570676 ALX1Q15699 326 aa17.9■□□□□ 0.46
RAB40B-203ENST00000570676 MCMDC2Q4G0Z9 681 aa17.9■□□□□ 0.46
RAB40B-203ENST00000570676 MAML3Q96JK9 1138 aa17.9■□□□□ 0.46
RAB40B-203ENST00000570676 INCENPQ9NQS7 918 aa17.9■□□□□ 0.46
RAB40B-203ENST00000570676 NR2E3Q9Y5X4 410 aa17.9■□□□□ 0.46
RAB40B-203ENST00000570676 FGRP09769 529 aa17.89■□□□□ 0.45
RAB40B-203ENST00000570676 FCER1AP12319 257 aa17.89■□□□□ 0.45
RAB40B-203ENST00000570676 COPB2P35606 906 aa17.89■□□□□ 0.45
RAB40B-203ENST00000570676 MMP19Q99542 508 aa17.89■□□□□ 0.45
RAB40B-203ENST00000570676 TEX13BQ9BXU2 312 aa17.89■□□□□ 0.45
RAB40B-203ENST00000570676 CCDC171Q6TFL3 1326 aa17.89■□□□□ 0.45
RAB40B-203ENST00000570676 LRRC37A2A6NM11 1700 aa17.89■□□□□ 0.45
RAB40B-203ENST00000570676 ATP2A1O14983 1001 aa17.88■□□□□ 0.45
RAB40B-203ENST00000570676 ORC4O43929 436 aa17.88■□□□□ 0.45
RAB40B-203ENST00000570676 MSCO60682 206 aa17.88■□□□□ 0.45
RAB40B-203ENST00000570676 FXR1P51114 621 aaKnown RBP eCLIP17.88■□□□□ 0.45
RAB40B-203ENST00000570676 SLFN13Q68D06 897 aa17.88■□□□□ 0.45
RAB40B-203ENST00000570676 SNRNP48Q6IEG0 339 aaKnown RBP17.88■□□□□ 0.45
RAB40B-203ENST00000570676 PRPF38AQ8NAV1 312 aaKnown RBP17.88■□□□□ 0.45
RAB40B-203ENST00000570676 IL17RBQ9NRM6 502 aa17.88■□□□□ 0.45
RAB40B-203ENST00000570676 SLC5A4Q9NY91 659 aa17.88■□□□□ 0.45
RAB40B-203ENST00000570676 TRIOBPQ9H2D6 2365 aa17.88■□□□□ 0.45
RAB40B-203ENST00000570676 LCTP09848 1927 aa17.88■□□□□ 0.45
RAB40B-203ENST00000570676 MCM3APO60318 1980 aa17.88■□□□□ 0.45
RAB40B-203ENST00000570676 TSPY2A6NKD2 308 aa17.87■□□□□ 0.45
RAB40B-203ENST00000570676 NMT2O60551 498 aa17.87■□□□□ 0.45
RAB40B-203ENST00000570676 FGAP02671 866 aa17.87■□□□□ 0.45
RAB40B-203ENST00000570676 PGK2P07205 417 aa17.87■□□□□ 0.45
RAB40B-203ENST00000570676 HSPD1P10809 573 aaKnown RBP17.87■□□□□ 0.45
RAB40B-203ENST00000570676 NOVP48745 357 aa17.87■□□□□ 0.45
RAB40B-203ENST00000570676 KCTD2Q14681 263 aa17.87■□□□□ 0.45
RAB40B-203ENST00000570676 ZNF792Q3KQV3 632 aa17.87■□□□□ 0.45
RAB40B-203ENST00000570676 RASGRP2Q7LDG7 609 aa17.87■□□□□ 0.45
RAB40B-203ENST00000570676 C7orf61Q8IZ16 206 aa17.87■□□□□ 0.45
RAB40B-203ENST00000570676 SLC38A10Q9HBR0 1119 aa17.87■□□□□ 0.45
RAB40B-203ENST00000570676 RBM27Q9P2N5 1060 aaKnown RBP17.87■□□□□ 0.45
RAB40B-203ENST00000570676 FEM1BQ9UK73 627 aa17.87■□□□□ 0.45
RAB40B-203ENST00000570676 RIPK3Q9Y572 518 aa17.87■□□□□ 0.45
RAB40B-203ENST00000570676 SMCHD1A6NHR9 2005 aa17.86■□□□□ 0.45
RAB40B-203ENST00000570676 CDC45O75419 566 aa17.86■□□□□ 0.45
RAB40B-203ENST00000570676 BMP3P12645 472 aa17.86■□□□□ 0.45
RAB40B-203ENST00000570676 CNGA1P29973 690 aa17.86■□□□□ 0.45
RAB40B-203ENST00000570676 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.86■□□□□ 0.45
RAB40B-203ENST00000570676 KIFC2Q96AC6 838 aa17.86■□□□□ 0.45
RAB40B-203ENST00000570676 GMCL1Q96IK5 515 aa17.86■□□□□ 0.45
RAB40B-203ENST00000570676 LTBP2Q14767 1821 aa17.86■□□□□ 0.45
RAB40B-203ENST00000570676 SEPT4O43236 478 aa17.85■□□□□ 0.45
RAB40B-203ENST00000570676 PPP4R3BQ5MIZ7 849 aa17.85■□□□□ 0.45
RAB40B-203ENST00000570676 STX8Q9UNK0 236 aa17.85■□□□□ 0.45
RAB40B-203ENST00000570676 DIS3Q9Y2L1 958 aaKnown RBP17.85■□□□□ 0.45
RAB40B-203ENST00000570676 TMEM232C9JQI7 657 aa17.84■□□□□ 0.45
RAB40B-203ENST00000570676 RANBP6O60518 1105 aaKnown RBP17.84■□□□□ 0.45
RAB40B-203ENST00000570676 STAT2P52630 851 aa17.84■□□□□ 0.45
RAB40B-203ENST00000570676 OAZ1P54368 228 aa17.84■□□□□ 0.45
RAB40B-203ENST00000570676 LRRC26Q2I0M4 334 aa17.84■□□□□ 0.45
RAB40B-203ENST00000570676 PRAMEF19Q5SWL8 479 aa17.84■□□□□ 0.45
RAB40B-203ENST00000570676 TBC1D10CQ8IV04 446 aa17.84■□□□□ 0.45
RAB40B-203ENST00000570676 CPXCR1Q8N123 301 aa17.84■□□□□ 0.45
RAB40B-203ENST00000570676 TINF2Q9BSI4 451 aa17.84■□□□□ 0.45
RAB40B-203ENST00000570676 RAVER2Q9HCJ3 691 aaKnown RBP17.84■□□□□ 0.45
RAB40B-203ENST00000570676 DIAPH3Q9NSV4 1193 aa17.84■□□□□ 0.45
RAB40B-203ENST00000570676 ZMYND8Q9ULU4 1186 aaPredicted RBP17.84■□□□□ 0.45
RAB40B-203ENST00000570676 ZNF536O15090 1300 aa17.83■□□□□ 0.44
RAB40B-203ENST00000570676 DNAJC25-GNG10A0A024R161 153 aa17.83■□□□□ 0.44
RAB40B-203ENST00000570676 HIP1O00291 1037 aa17.83■□□□□ 0.44
RAB40B-203ENST00000570676 DNM1LO00429 736 aa17.83■□□□□ 0.44
RAB40B-203ENST00000570676 ZBED4O75132 1171 aa17.83■□□□□ 0.44
RAB40B-203ENST00000570676 CHMLP26374 656 aa17.83■□□□□ 0.44
RAB40B-203ENST00000570676 SLC1A4P43007 532 aa17.83■□□□□ 0.44
RAB40B-203ENST00000570676 HAND2P61296 217 aa17.83■□□□□ 0.44
RAB40B-203ENST00000570676 ANO1Q5XXA6 986 aa17.83■□□□□ 0.44
RAB40B-203ENST00000570676 CASC1Q6TDU7 716 aa17.83■□□□□ 0.44
RAB40B-203ENST00000570676 NRBP1Q9UHY1 535 aa17.83■□□□□ 0.44
RAB40B-203ENST00000570676 PLA2G6O60733 806 aa17.82■□□□□ 0.44
RAB40B-203ENST00000570676 MCCP23508 829 aa17.82■□□□□ 0.44
RAB40B-203ENST00000570676 KCTD1Q719H9 257 aa17.82■□□□□ 0.44
RAB40B-203ENST00000570676 FAM160B2Q86V87 743 aa17.82■□□□□ 0.44
RAB40B-203ENST00000570676 FGD4Q96M96 766 aa17.82■□□□□ 0.44
RAB40B-203ENST00000570676 NEDD4P46934 1319 aa17.81■□□□□ 0.44
RAB40B-203ENST00000570676 FDX1P10109 184 aa17.81■□□□□ 0.44
RAB40B-203ENST00000570676 TAL1P17542 331 aaPredicted RBP17.81■□□□□ 0.44
RAB40B-203ENST00000570676 SYN1P17600 705 aa17.81■□□□□ 0.44
RAB40B-203ENST00000570676 RRP12Q5JTH9 1297 aaKnown RBP17.81■□□□□ 0.44
RAB40B-203ENST00000570676 GJC2Q5T442 439 aaPredicted RBP17.81■□□□□ 0.44
RAB40B-203ENST00000570676 STAG1Q8WVM7 1258 aa17.81■□□□□ 0.44
RAB40B-203ENST00000570676 CHMP4CQ96CF2 233 aa17.81■□□□□ 0.44
RAB40B-203ENST00000570676 GDF15Q99988 308 aa17.81■□□□□ 0.44
RAB40B-203ENST00000570676 TOMM22Q9NS69 142 aa17.81■□□□□ 0.44
RAB40B-203ENST00000570676 TCP11L1Q9NUJ3 509 aa17.81■□□□□ 0.44
RAB40B-203ENST00000570676 PCDH10Q9P2E7 1040 aa17.81■□□□□ 0.44
RAB40B-203ENST00000570676 ISY1Q9ULR0 285 aaKnown RBP17.81■□□□□ 0.44
RAB40B-203ENST00000570676 CTDP1Q9Y5B0 961 aaPredicted RBP17.81■□□□□ 0.44
RAB40B-203ENST00000570676 SYNGAP1Q96PV0 1343 aa17.8■□□□□ 0.44
RAB40B-203ENST00000570676 ZNF865P0CJ78 1059 aaPredicted RBP17.8■□□□□ 0.44
RAB40B-203ENST00000570676 SLC4A3P48751 1232 aa17.8■□□□□ 0.44
RAB40B-203ENST00000570676 MFAP1P55081 439 aaKnown RBP17.8■□□□□ 0.44
RAB40B-203ENST00000570676 C8orf34Q49A92 452 aa17.8■□□□□ 0.44
RAB40B-203ENST00000570676 AKNAD1Q5T1N1 836 aa17.8■□□□□ 0.44
RAB40B-203ENST00000570676 RCSD1Q6JBY9 416 aa17.8■□□□□ 0.44
RAB40B-203ENST00000570676 CWC27Q6UX04 472 aaKnown RBP17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms