RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 KCTD2Q14681 263 aa24.47■■□□□ 1.51
PSEN1-225ENST00000560005 ZNF792Q3KQV3 632 aa24.47■■□□□ 1.51
PSEN1-225ENST00000560005 C8orf34Q49A92 452 aa24.47■■□□□ 1.51
PSEN1-225ENST00000560005 TTC22Q5TAA0 569 aa24.47■■□□□ 1.51
PSEN1-225ENST00000560005 DYNLL2Q96FJ2 89 aa24.47■■□□□ 1.51
PSEN1-225ENST00000560005 SH2D4AQ9H788 454 aa24.47■■□□□ 1.51
PSEN1-225ENST00000560005 DIS3Q9Y2L1 958 aaKnown RBP24.47■■□□□ 1.51
PSEN1-225ENST00000560005 TIMP1P01033 207 aa24.46■■□□□ 1.51
PSEN1-225ENST00000560005 PDE6AP16499 860 aa24.46■■□□□ 1.51
PSEN1-225ENST00000560005 SLC9C2Q5TAH2 1124 aa24.46■■□□□ 1.51
PSEN1-225ENST00000560005 NUP133Q8WUM0 1156 aa24.46■■□□□ 1.51
PSEN1-225ENST00000560005 GAS2L1Q99501 681 aaPredicted RBP24.46■■□□□ 1.51
PSEN1-225ENST00000560005 TSEN34Q9BSV6 310 aaKnown RBP24.46■■□□□ 1.51
PSEN1-225ENST00000560005 IL1RAPL2Q9NP60 686 aa24.46■■□□□ 1.51
PSEN1-225ENST00000560005 DCP1AQ9NPI6 582 aaPredicted RBP24.46■■□□□ 1.51
PSEN1-225ENST00000560005 FBXO28Q9NVF7 368 aa24.46■■□□□ 1.51
PSEN1-225ENST00000560005 SWAP70Q9UH65 585 aa24.46■■□□□ 1.51
PSEN1-225ENST00000560005 NCOR1O75376 2440 aa24.46■■□□□ 1.51
PSEN1-225ENST00000560005 TTC41PQ6P2S7 1318 aa24.45■■□□□ 1.5
PSEN1-225ENST00000560005 SYNRGQ9UMZ2 1314 aa24.45■■□□□ 1.5
PSEN1-225ENST00000560005 IFIT2P09913 472 aaKnown RBP24.45■■□□□ 1.5
PSEN1-225ENST00000560005 PBX2P40425 430 aa24.45■■□□□ 1.5
PSEN1-225ENST00000560005 AACSQ86V21 672 aa24.45■■□□□ 1.5
PSEN1-225ENST00000560005 RIOX2Q8IUF8 465 aa24.45■■□□□ 1.5
PSEN1-225ENST00000560005 PBX4Q9BYU1 374 aa24.45■■□□□ 1.5
PSEN1-225ENST00000560005 TBX21Q9UL17 535 aa24.45■■□□□ 1.5
PSEN1-225ENST00000560005 ADAMTS5Q9UNA0 930 aa24.45■■□□□ 1.5
PSEN1-225ENST00000560005 CNPY2Q9Y2B0 182 aa24.45■■□□□ 1.5
PSEN1-225ENST00000560005 MYH8P13535 1937 aa24.45■■□□□ 1.5
PSEN1-225ENST00000560005 BDP1A6H8Y1 2624 aa24.45■■□□□ 1.5
PSEN1-225ENST00000560005 MYO9BQ13459 2157 aa24.44■■□□□ 1.5
PSEN1-225ENST00000560005 SALL3Q9BXA9 1300 aa24.44■■□□□ 1.5
PSEN1-225ENST00000560005 GRXCR1A8MXD5 290 aa24.44■■□□□ 1.5
PSEN1-225ENST00000560005 ERC2O15083 957 aa24.44■■□□□ 1.5
PSEN1-225ENST00000560005 CCDC129Q6ZRS4 1044 aa24.44■■□□□ 1.5
PSEN1-225ENST00000560005 LCORLQ8N3X6 602 aa24.44■■□□□ 1.5
PSEN1-225ENST00000560005 ATXN2LQ8WWM7 1075 aaKnown RBP24.44■■□□□ 1.5
PSEN1-225ENST00000560005 PRDM12Q9H4Q4 367 aa24.44■■□□□ 1.5
PSEN1-225ENST00000560005 ZNF532Q9HCE3 1301 aa24.43■■□□□ 1.5
PSEN1-225ENST00000560005 STAT3P40763 770 aa24.43■■□□□ 1.5
PSEN1-225ENST00000560005 TTF1Q15361 905 aaPredicted RBP24.43■■□□□ 1.5
PSEN1-225ENST00000560005 MFSD5Q6N075 450 aa24.43■■□□□ 1.5
PSEN1-225ENST00000560005 C16orf59Q7L2K0 433 aa24.43■■□□□ 1.5
PSEN1-225ENST00000560005 BCL11AQ9H165 835 aa24.43■■□□□ 1.5
PSEN1-225ENST00000560005 THEGQ9P2T0 379 aa24.43■■□□□ 1.5
PSEN1-225ENST00000560005 RBM19Q9Y4C8 960 aaKnown RBP24.43■■□□□ 1.5
PSEN1-225ENST00000560005 MOXD2PA6NHM9 499 aa24.42■■□□□ 1.5
PSEN1-225ENST00000560005 VWA5AO00534 786 aa24.42■■□□□ 1.5
PSEN1-225ENST00000560005 KCNA10Q16322 511 aa24.42■■□□□ 1.5
PSEN1-225ENST00000560005 TMEM240Q5SV17 173 aa24.42■■□□□ 1.5
PSEN1-225ENST00000560005 AKNAD1Q5T1N1 836 aa24.42■■□□□ 1.5
PSEN1-225ENST00000560005 KLHDC9Q8NEP7 349 aa24.42■■□□□ 1.5
PSEN1-225ENST00000560005 ASB2Q96Q27 587 aa24.42■■□□□ 1.5
PSEN1-225ENST00000560005 ZNF214Q9UL59 606 aaPredicted RBP24.42■■□□□ 1.5
PSEN1-225ENST00000560005 MYADML2A6NDP7 307 aa24.41■■□□□ 1.5
PSEN1-225ENST00000560005 PPIGQ13427 754 aaKnown RBP eCLIP24.41■■□□□ 1.5
PSEN1-225ENST00000560005 CCDC174Q6PII3 467 aa24.41■■□□□ 1.5
PSEN1-225ENST00000560005 CASC1Q6TDU7 716 aa24.41■■□□□ 1.5
PSEN1-225ENST00000560005 OTUD7AQ8TE49 926 aaPredicted RBP24.41■■□□□ 1.5
PSEN1-225ENST00000560005 ADAMTS19Q8TE59 1207 aa24.41■■□□□ 1.5
PSEN1-225ENST00000560005 UPF2Q9HAU5 1272 aaKnown RBP24.41■■□□□ 1.5
PSEN1-225ENST00000560005 PPP1R9AQ9ULJ8 1098 aa24.41■■□□□ 1.5
PSEN1-225ENST00000560005 TCRBV5S4A2TA0A5A2 114 aa24.4■■□□□ 1.5
PSEN1-225ENST00000560005 SMIM22K7EJ46 135 aa24.4■■□□□ 1.5
PSEN1-225ENST00000560005 EEF2P13639 858 aaKnown RBP24.4■■□□□ 1.5
PSEN1-225ENST00000560005 RASIP1Q5U651 963 aa24.4■■□□□ 1.5
PSEN1-225ENST00000560005 CCSAPQ6IQ19 270 aaPredicted RBP24.4■■□□□ 1.5
PSEN1-225ENST00000560005 GLT1D1Q96MS3 346 aa24.4■■□□□ 1.5
PSEN1-225ENST00000560005 ARMT1Q9H993 441 aa24.4■■□□□ 1.5
PSEN1-225ENST00000560005 ZHX1Q9UKY1 873 aaPredicted RBP24.4■■□□□ 1.5
PSEN1-225ENST00000560005 FAM184BQ9ULE4 1060 aa24.4■■□□□ 1.5
PSEN1-225ENST00000560005 MROH7Q68CQ1 1323 aa24.39■■□□□ 1.5
PSEN1-225ENST00000560005 ACRP10323 421 aa24.39■■□□□ 1.49
PSEN1-225ENST00000560005 CSF2RAP15509 400 aa24.39■■□□□ 1.49
PSEN1-225ENST00000560005 COPB2P35606 906 aa24.39■■□□□ 1.49
PSEN1-225ENST00000560005 IRX5P78411 483 aaPredicted RBP24.39■■□□□ 1.49
PSEN1-225ENST00000560005 CCDC85BQ15834 202 aaPredicted RBP24.39■■□□□ 1.49
PSEN1-225ENST00000560005 REPS2Q8NFH8 660 aa24.39■■□□□ 1.49
PSEN1-225ENST00000560005 CCDC17Q96LX7 622 aa24.39■■□□□ 1.49
PSEN1-225ENST00000560005 ECHDC1Q9NTX5 307 aa24.39■■□□□ 1.49
PSEN1-225ENST00000560005 CHD7Q9P2D1 2997 aa24.39■■□□□ 1.49
PSEN1-225ENST00000560005 GOLIM4O00461 696 aa24.38■■□□□ 1.49
PSEN1-225ENST00000560005 PRKAB2O43741 272 aa24.38■■□□□ 1.49
PSEN1-225ENST00000560005 RAD21O60216 631 aa24.38■■□□□ 1.49
PSEN1-225ENST00000560005 CDC45O75419 566 aa24.38■■□□□ 1.49
PSEN1-225ENST00000560005 SNAI1O95863 264 aaPredicted RBP24.38■■□□□ 1.49
PSEN1-225ENST00000560005 ADGRE1Q14246 886 aa24.38■■□□□ 1.49
PSEN1-225ENST00000560005 FAM83BQ5T0W9 1011 aa24.38■■□□□ 1.49
PSEN1-225ENST00000560005 MSL3Q8N5Y2 521 aaKnown RBP24.38■■□□□ 1.49
PSEN1-225ENST00000560005 UHRF1Q96T88 793 aaPredicted RBP24.38■■□□□ 1.49
PSEN1-225ENST00000560005 ELP1O95163 1332 aa24.37■■□□□ 1.49
PSEN1-225ENST00000560005 SYNGAP1Q96PV0 1343 aa24.37■■□□□ 1.49
PSEN1-225ENST00000560005 CYP2D7A0A087X1C5 515 aa24.37■■□□□ 1.49
PSEN1-225ENST00000560005 IGFBP4P22692 258 aa24.37■■□□□ 1.49
PSEN1-225ENST00000560005 CDK8P49336 464 aa24.37■■□□□ 1.49
PSEN1-225ENST00000560005 CDK7P50613 346 aa24.37■■□□□ 1.49
PSEN1-225ENST00000560005 MRPS5P82675 430 aaKnown RBP24.37■■□□□ 1.49
PSEN1-225ENST00000560005 ZNF365Q70YC5 407 aa24.37■■□□□ 1.49
PSEN1-225ENST00000560005 TMEM199Q8N511 208 aa24.37■■□□□ 1.49
PSEN1-225ENST00000560005 DNAJC2Q99543 621 aaKnown RBP24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms