RNA–Protein interactions for RNA: ENST00000522788.5

HOXA3-206, Transcript of homeobox A3, humanhuman

TSL 3

Gene HOXA3, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-206ENST00000522788 TEX13BQ9BXU2 312 aa25.51■■□□□ 1.67
HOXA3-206ENST00000522788 SLC38A10Q9HBR0 1119 aa25.51■■□□□ 1.67
HOXA3-206ENST00000522788 RIPK3Q9Y572 518 aa25.51■■□□□ 1.67
HOXA3-206ENST00000522788 HIP1O00291 1037 aa25.5■■□□□ 1.67
HOXA3-206ENST00000522788 COPB2P35606 906 aa25.5■■□□□ 1.67
HOXA3-206ENST00000522788 TTC22Q5TAA0 569 aa25.5■■□□□ 1.67
HOXA3-206ENST00000522788 MAML3Q96JK9 1138 aa25.5■■□□□ 1.67
HOXA3-206ENST00000522788 CYBAP13498 195 aa25.49■■□□□ 1.67
HOXA3-206ENST00000522788 MCCP23508 829 aa25.49■■□□□ 1.67
HOXA3-206ENST00000522788 RRP12Q5JTH9 1297 aaKnown RBP25.49■■□□□ 1.67
HOXA3-206ENST00000522788 SNRNP48Q6IEG0 339 aaKnown RBP25.49■■□□□ 1.67
HOXA3-206ENST00000522788 RASGRP2Q7LDG7 609 aa25.49■■□□□ 1.67
HOXA3-206ENST00000522788 STAG1Q8WVM7 1258 aa25.49■■□□□ 1.67
HOXA3-206ENST00000522788 IL25Q9H293 177 aa25.49■■□□□ 1.67
HOXA3-206ENST00000522788 TCP11L1Q9NUJ3 509 aa25.49■■□□□ 1.67
HOXA3-206ENST00000522788 SLC5A4Q9NY91 659 aa25.49■■□□□ 1.67
HOXA3-206ENST00000522788 TMEM232C9JQI7 657 aa25.48■■□□□ 1.67
HOXA3-206ENST00000522788 ZBED4O75132 1171 aa25.48■■□□□ 1.67
HOXA3-206ENST00000522788 PGK2P07205 417 aa25.48■■□□□ 1.67
HOXA3-206ENST00000522788 ZNF792Q3KQV3 632 aa25.48■■□□□ 1.67
HOXA3-206ENST00000522788 AKNAD1Q5T1N1 836 aa25.48■■□□□ 1.67
HOXA3-206ENST00000522788 CPXCR1Q8N123 301 aa25.48■■□□□ 1.67
HOXA3-206ENST00000522788 CHMP4CQ96CF2 233 aa25.48■■□□□ 1.67
HOXA3-206ENST00000522788 RAVER2Q9HCJ3 691 aaKnown RBP25.48■■□□□ 1.67
HOXA3-206ENST00000522788 TOMM22Q9NS69 142 aa25.48■■□□□ 1.67
HOXA3-206ENST00000522788 DDX20Q9UHI6 824 aaKnown RBP25.48■■□□□ 1.67
HOXA3-206ENST00000522788 PLA2G6O60733 806 aa25.47■■□□□ 1.67
HOXA3-206ENST00000522788 PCP11498 1178 aaKnown RBP25.47■■□□□ 1.67
HOXA3-206ENST00000522788 SLC1A4P43007 532 aa25.47■■□□□ 1.67
HOXA3-206ENST00000522788 KCTD2Q14681 263 aa25.47■■□□□ 1.67
HOXA3-206ENST00000522788 MYH4Q9Y623 1939 aa25.47■■□□□ 1.67
HOXA3-206ENST00000522788 COL11A1P12107 1806 aaPredicted RBP25.47■■□□□ 1.67
HOXA3-206ENST00000522788 STAT2P52630 851 aa25.46■■□□□ 1.67
HOXA3-206ENST00000522788 RCSD1Q6JBY9 416 aa25.46■■□□□ 1.67
HOXA3-206ENST00000522788 MFSD6Q6ZSS7 791 aa25.46■■□□□ 1.67
HOXA3-206ENST00000522788 KCTD1Q719H9 257 aa25.46■■□□□ 1.67
HOXA3-206ENST00000522788 DSCC1Q9BVC3 393 aa25.46■■□□□ 1.67
HOXA3-206ENST00000522788 DIS3Q9Y2L1 958 aaKnown RBP25.46■■□□□ 1.67
HOXA3-206ENST00000522788 COL6A1P12109 1028 aa25.45■■□□□ 1.66
HOXA3-206ENST00000522788 OAZ1P54368 228 aa25.45■■□□□ 1.66
HOXA3-206ENST00000522788 PRAMEF19Q5SWL8 479 aa25.45■■□□□ 1.66
HOXA3-206ENST00000522788 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.45■■□□□ 1.66
HOXA3-206ENST00000522788 FAM160B2Q86V87 743 aa25.45■■□□□ 1.66
HOXA3-206ENST00000522788 CHURC1Q8WUH1 139 aa25.45■■□□□ 1.66
HOXA3-206ENST00000522788 TMEM47Q9BQJ4 181 aa25.45■■□□□ 1.66
HOXA3-206ENST00000522788 C11orf49Q9H6J7 331 aa25.45■■□□□ 1.66
HOXA3-206ENST00000522788 PFASO15067 1338 aa25.44■■□□□ 1.66
HOXA3-206ENST00000522788 NEDD4P46934 1319 aa25.44■■□□□ 1.66
HOXA3-206ENST00000522788 ZNF213O14771 459 aa25.44■■□□□ 1.66
HOXA3-206ENST00000522788 FDX1P10109 184 aa25.44■■□□□ 1.66
HOXA3-206ENST00000522788 CNGA1P29973 690 aa25.44■■□□□ 1.66
HOXA3-206ENST00000522788 RNF41Q9H4P4 317 aaPredicted RBP25.44■■□□□ 1.66
HOXA3-206ENST00000522788 ZNF536O15090 1300 aa25.43■■□□□ 1.66
HOXA3-206ENST00000522788 DNAJC25-GNG10A0A024R161 153 aa25.43■■□□□ 1.66
HOXA3-206ENST00000522788 MSCO60682 206 aa25.43■■□□□ 1.66
HOXA3-206ENST00000522788 TOP1P11387 765 aaKnown RBP25.43■■□□□ 1.66
HOXA3-206ENST00000522788 ISY1Q9ULR0 285 aaKnown RBP25.43■■□□□ 1.66
HOXA3-206ENST00000522788 CTDP1Q9Y5B0 961 aaPredicted RBP25.43■■□□□ 1.66
HOXA3-206ENST00000522788 SLC4A3P48751 1232 aa25.42■■□□□ 1.66
HOXA3-206ENST00000522788 DCAF4Q8WV16 495 aa25.42■■□□□ 1.66
HOXA3-206ENST00000522788 TINF2Q9BSI4 451 aa25.42■■□□□ 1.66
HOXA3-206ENST00000522788 MTMR7Q9Y216 660 aa25.42■■□□□ 1.66
HOXA3-206ENST00000522788 NR2E3Q9Y5X4 410 aa25.42■■□□□ 1.66
HOXA3-206ENST00000522788 SEPT4O43236 478 aa25.41■■□□□ 1.66
HOXA3-206ENST00000522788 EVI5O60447 810 aa25.41■■□□□ 1.66
HOXA3-206ENST00000522788 HABP4Q5JVS0 413 aaKnown RBP25.41■■□□□ 1.66
HOXA3-206ENST00000522788 TTBK2Q6IQ55 1244 aa25.41■■□□□ 1.66
HOXA3-206ENST00000522788 CHST13Q8NET6 341 aa25.41■■□□□ 1.66
HOXA3-206ENST00000522788 TTC14Q96N46 770 aa25.41■■□□□ 1.66
HOXA3-206ENST00000522788 PRR12Q9ULL5 1215 aa25.41■■□□□ 1.66
HOXA3-206ENST00000522788 COLQQ9Y215 455 aaPredicted RBP25.41■■□□□ 1.66
HOXA3-206ENST00000522788 SNAP25P60880 206 aa25.4■■□□□ 1.66
HOXA3-206ENST00000522788 IKQ13123 557 aaPredicted RBP25.4■■□□□ 1.66
HOXA3-206ENST00000522788 ESR2Q92731 530 aa25.4■■□□□ 1.66
HOXA3-206ENST00000522788 AGBL1Q96MI9 1066 aa25.4■■□□□ 1.66
HOXA3-206ENST00000522788 NRBP1Q9UHY1 535 aa25.4■■□□□ 1.66
HOXA3-206ENST00000522788 TAL1P17542 331 aaPredicted RBP25.39■■□□□ 1.66
HOXA3-206ENST00000522788 CHMLP26374 656 aa25.39■■□□□ 1.66
HOXA3-206ENST00000522788 ANO1Q5XXA6 986 aa25.39■■□□□ 1.66
HOXA3-206ENST00000522788 BTNL9Q6UXG8 535 aa25.39■■□□□ 1.66
HOXA3-206ENST00000522788 DDX11Q96FC9 970 aa25.39■■□□□ 1.66
HOXA3-206ENST00000522788 FGD4Q96M96 766 aa25.39■■□□□ 1.66
HOXA3-206ENST00000522788 FBXO40Q9UH90 709 aa25.39■■□□□ 1.66
HOXA3-206ENST00000522788 SLC34A2O95436 690 aa25.38■■□□□ 1.65
HOXA3-206ENST00000522788 PDHBP11177 359 aa25.38■■□□□ 1.65
HOXA3-206ENST00000522788 NT5C2P49902 561 aa25.38■■□□□ 1.65
HOXA3-206ENST00000522788 CCDC96Q2M329 555 aa25.38■■□□□ 1.65
HOXA3-206ENST00000522788 ZKSCAN3Q9BRR0 538 aa25.38■■□□□ 1.65
HOXA3-206ENST00000522788 CTNNA3Q9UI47 895 aa25.38■■□□□ 1.65
HOXA3-206ENST00000522788 RAD50Q92878 1312 aa25.37■■□□□ 1.65
HOXA3-206ENST00000522788 ZNF865P0CJ78 1059 aaPredicted RBP25.37■■□□□ 1.65
HOXA3-206ENST00000522788 SNHG28P0DPA3 235 aa25.37■■□□□ 1.65
HOXA3-206ENST00000522788 SLC16A2P36021 539 aa25.37■■□□□ 1.65
HOXA3-206ENST00000522788 IMMTQ16891 758 aaKnown RBP25.37■■□□□ 1.65
HOXA3-206ENST00000522788 MAMDC4Q6UXC1 1216 aa25.37■■□□□ 1.65
HOXA3-206ENST00000522788 MSL3Q8N5Y2 521 aaKnown RBP25.37■■□□□ 1.65
HOXA3-206ENST00000522788 RANBP17Q9H2T7 1088 aaKnown RBP25.37■■□□□ 1.65
HOXA3-206ENST00000522788 PRO3102Q9H379 93 aa25.37■■□□□ 1.65
HOXA3-206ENST00000522788 FRMPD2Q68DX3 1309 aaPredicted RBP25.37■■□□□ 1.65
HOXA3-206ENST00000522788 B4E1Z4 1266 aa25.36■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms