RNA–Protein interactions for RNA: ENST00000513803.5

NFKB1-211, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 4

Gene NFKB1, Length 612 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-211ENST00000513803 ZBBXA8MT70 800 aa13.19□□□□□ -0.3
NFKB1-211ENST00000513803 KIAA1755Q5JYT7 1200 aa13.19□□□□□ -0.3
NFKB1-211ENST00000513803 TMED8Q6PL24 325 aaPredicted RBP13.19□□□□□ -0.3
NFKB1-211ENST00000513803 MAMDC4Q6UXC1 1216 aa13.19□□□□□ -0.3
NFKB1-211ENST00000513803 TMEM179Q6ZVK1 233 aa13.19□□□□□ -0.3
NFKB1-211ENST00000513803 SPICE1Q8N0Z3 855 aa13.19□□□□□ -0.3
NFKB1-211ENST00000513803 KHSRPQ92945 711 aaKnown RBP eCLIP13.19□□□□□ -0.3
NFKB1-211ENST00000513803 DDX11Q96FC9 970 aa13.19□□□□□ -0.3
NFKB1-211ENST00000513803 ZNF512BQ96KM6 892 aaPredicted RBP13.19□□□□□ -0.3
NFKB1-211ENST00000513803 SEZ6LQ9BYH1 1024 aa13.19□□□□□ -0.3
NFKB1-211ENST00000513803 ARHGEF10LQ9HCE6 1279 aa13.19□□□□□ -0.3
NFKB1-211ENST00000513803 GPR108Q9NPR9 543 aa13.19□□□□□ -0.3
NFKB1-211ENST00000513803 PIH1D3Q9NQM4 214 aaKnown RBP13.19□□□□□ -0.3
NFKB1-211ENST00000513803 RFXAPO00287 272 aa13.18□□□□□ -0.3
NFKB1-211ENST00000513803 WDR46O15213 610 aaKnown RBP13.18□□□□□ -0.3
NFKB1-211ENST00000513803 IDH1O75874 414 aaKnown RBP13.18□□□□□ -0.3
NFKB1-211ENST00000513803 ZAP70P43403 619 aa13.18□□□□□ -0.3
NFKB1-211ENST00000513803 GJA9P57773 515 aa13.18□□□□□ -0.3
NFKB1-211ENST00000513803 ACVR2BQ13705 512 aa13.18□□□□□ -0.3
NFKB1-211ENST00000513803 UIMC1Q96RL1 719 aa13.18□□□□□ -0.3
NFKB1-211ENST00000513803 UPF3AQ9H1J1 476 aaKnown RBP13.18□□□□□ -0.3
NFKB1-211ENST00000513803 VCPKMTQ9H867 229 aa13.18□□□□□ -0.3
NFKB1-211ENST00000513803 TMX2Q9Y320 296 aa13.18□□□□□ -0.3
NFKB1-211ENST00000513803 CDK5RAP2Q96SN8 1893 aa13.18□□□□□ -0.3
NFKB1-211ENST00000513803 FOCADQ5VW36 1801 aa13.18□□□□□ -0.3
NFKB1-211ENST00000513803 MYH1P12882 1939 aa13.17□□□□□ -0.3
NFKB1-211ENST00000513803 BRWD1Q9NSI6 2320 aa13.17□□□□□ -0.3
NFKB1-211ENST00000513803 E9PSI1 815 aa13.17□□□□□ -0.3
NFKB1-211ENST00000513803 VWA5AO00534 786 aa13.17□□□□□ -0.3
NFKB1-211ENST00000513803 CABYRO75952 493 aa13.17□□□□□ -0.3
NFKB1-211ENST00000513803 CCL23P55773 120 aa13.17□□□□□ -0.3
NFKB1-211ENST00000513803 GABPAQ06546 454 aa13.17□□□□□ -0.3
NFKB1-211ENST00000513803 MAGEB6Q8N7X4 407 aa13.17□□□□□ -0.3
NFKB1-211ENST00000513803 KCNH6Q9H252 994 aa13.17□□□□□ -0.3
NFKB1-211ENST00000513803 ABHD16BQ9H3Z7 469 aa13.17□□□□□ -0.3
NFKB1-211ENST00000513803 NOB1Q9ULX3 412 aaKnown RBP13.17□□□□□ -0.3
NFKB1-211ENST00000513803 CA3P07451 260 aa13.16□□□□□ -0.3
NFKB1-211ENST00000513803 ALADP13716 330 aa13.16□□□□□ -0.3
NFKB1-211ENST00000513803 IRX5P78411 483 aaPredicted RBP13.16□□□□□ -0.3
NFKB1-211ENST00000513803 CSPP1Q1MSJ5 1256 aa13.16□□□□□ -0.3
NFKB1-211ENST00000513803 CCDC144BQ3MJ40 725 aa13.16□□□□□ -0.3
NFKB1-211ENST00000513803 TNNI3KQ59H18 835 aa13.16□□□□□ -0.3
NFKB1-211ENST00000513803 ZNF467Q7Z7K2 595 aaPredicted RBP13.16□□□□□ -0.3
NFKB1-211ENST00000513803 SIAH1Q8IUQ4 282 aa13.16□□□□□ -0.3
NFKB1-211ENST00000513803 SLC43A3Q8NBI5 491 aa13.16□□□□□ -0.3
NFKB1-211ENST00000513803 DBNDD2Q9BQY9 259 aa13.16□□□□□ -0.3
NFKB1-211ENST00000513803 NOC4LQ9BVI4 516 aaKnown RBP13.16□□□□□ -0.3
NFKB1-211ENST00000513803 CERS4Q9HA82 394 aa13.16□□□□□ -0.3
NFKB1-211ENST00000513803 MCM9Q9NXL9 1143 aa13.16□□□□□ -0.3
NFKB1-211ENST00000513803 FPGT-TNNI3KV9GXZ4 949 aa13.16□□□□□ -0.3
NFKB1-211ENST00000513803 UMODL1Q5DID0 1318 aa13.15□□□□□ -0.3
NFKB1-211ENST00000513803 KIF28PB7ZC32 967 aa13.15□□□□□ -0.3
NFKB1-211ENST00000513803 PFKMP08237 780 aa13.15□□□□□ -0.3
NFKB1-211ENST00000513803 NKX3-2P78367 333 aa13.15□□□□□ -0.3
NFKB1-211ENST00000513803 NHLH1Q02575 133 aa13.15□□□□□ -0.3
NFKB1-211ENST00000513803 ICA1Q05084 483 aa13.15□□□□□ -0.3
NFKB1-211ENST00000513803 ITGA7Q13683 1181 aa13.15□□□□□ -0.3
NFKB1-211ENST00000513803 GJD3Q8N144 294 aa13.15□□□□□ -0.3
NFKB1-211ENST00000513803 ARNTL2Q8WYA1 636 aa13.15□□□□□ -0.3
NFKB1-211ENST00000513803 CD320Q9NPF0 282 aa13.15□□□□□ -0.3
NFKB1-211ENST00000513803 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.15□□□□□ -0.3
NFKB1-211ENST00000513803 SWAP70Q9UH65 585 aa13.15□□□□□ -0.3
NFKB1-211ENST00000513803 ZNF214Q9UL59 606 aaPredicted RBP13.15□□□□□ -0.3
NFKB1-211ENST00000513803 PPP1R9AQ9ULJ8 1098 aa13.15□□□□□ -0.3
NFKB1-211ENST00000513803 A0A0G2JMZ2 1700 aa13.14□□□□□ -0.31
NFKB1-211ENST00000513803 DNAJC25-GNG10A0A024R161 153 aa13.14□□□□□ -0.31
NFKB1-211ENST00000513803 ACTN1P12814 892 aa13.14□□□□□ -0.31
NFKB1-211ENST00000513803 KRT40Q6A162 431 aa13.14□□□□□ -0.31
NFKB1-211ENST00000513803 CXCL17Q6UXB2 119 aa13.14□□□□□ -0.31
NFKB1-211ENST00000513803 NOL8Q76FK4 1167 aaKnown RBP13.14□□□□□ -0.31
NFKB1-211ENST00000513803 PHOSPHO2Q8TCD6 241 aa13.14□□□□□ -0.31
NFKB1-211ENST00000513803 TEX13BQ9BXU2 312 aa13.14□□□□□ -0.31
NFKB1-211ENST00000513803 CRNKL1Q9BZJ0 848 aaKnown RBP13.14□□□□□ -0.31
NFKB1-211ENST00000513803 TRPV6Q9H1D0 765 aa13.14□□□□□ -0.31
NFKB1-211ENST00000513803 FBXO28Q9NVF7 368 aa13.14□□□□□ -0.31
NFKB1-211ENST00000513803 GBF1Q92538 1859 aa13.13□□□□□ -0.31
NFKB1-211ENST00000513803 MAGEB6P1A0A0J9YX57 407 aa13.13□□□□□ -0.31
NFKB1-211ENST00000513803 ZEB2O60315 1214 aa13.13□□□□□ -0.31
NFKB1-211ENST00000513803 GNAI2P04899 355 aa13.13□□□□□ -0.31
NFKB1-211ENST00000513803 TAP1Q03518 808 aa13.13□□□□□ -0.31
NFKB1-211ENST00000513803 OS9Q13438 667 aaPredicted RBP13.13□□□□□ -0.31
NFKB1-211ENST00000513803 TTLL4Q14679 1199 aa13.13□□□□□ -0.31
NFKB1-211ENST00000513803 FAM9BQ8IZU0 186 aa13.13□□□□□ -0.31
NFKB1-211ENST00000513803 CCDC17Q96LX7 622 aa13.13□□□□□ -0.31
NFKB1-211ENST00000513803 RIOK1Q9BRS2 568 aaKnown RBP13.13□□□□□ -0.31
NFKB1-211ENST00000513803 WNT8AQ9H1J5 351 aa13.13□□□□□ -0.31
NFKB1-211ENST00000513803 GOPCQ9HD26 462 aa13.13□□□□□ -0.31
NFKB1-211ENST00000513803 LMCD1Q9NZU5 365 aa13.13□□□□□ -0.31
NFKB1-211ENST00000513803 EPOPA6NHQ4 379 aa13.12□□□□□ -0.31
NFKB1-211ENST00000513803 CTAGE5O15320 804 aa13.12□□□□□ -0.31
NFKB1-211ENST00000513803 ADCY6O43306 1168 aa13.12□□□□□ -0.31
NFKB1-211ENST00000513803 SSTR3P32745 418 aaPredicted RBP13.12□□□□□ -0.31
NFKB1-211ENST00000513803 BEX3Q00994 111 aa13.12□□□□□ -0.31
NFKB1-211ENST00000513803 TNFAIP2Q03169 654 aa13.12□□□□□ -0.31
NFKB1-211ENST00000513803 GRB10Q13322 594 aa13.12□□□□□ -0.31
NFKB1-211ENST00000513803 SNRNP48Q6IEG0 339 aaKnown RBP13.12□□□□□ -0.31
NFKB1-211ENST00000513803 FAM178BQ8IXR5 827 aa13.12□□□□□ -0.31
NFKB1-211ENST00000513803 REPS2Q8NFH8 660 aa13.12□□□□□ -0.31
NFKB1-211ENST00000513803 SCLYQ96I15 445 aa13.12□□□□□ -0.31
NFKB1-211ENST00000513803 SLC9A7Q96T83 725 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms