RNA–Protein interactions for RNA: ENST00000417658.5

PRPF18-203, Transcript of pre-mRNA processing factor 18, humanhuman

TSL 5

Gene PRPF18, Length 1,062 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-203ENST00000417658 CTR9Q6PD62 1173 aa19.62■□□□□ 0.73
PRPF18-203ENST00000417658 HAUS7Q99871 368 aa19.62■□□□□ 0.73
PRPF18-203ENST00000417658 TEX13BQ9BXU2 312 aa19.62■□□□□ 0.73
PRPF18-203ENST00000417658 PRDM6Q9NQX0 595 aa19.62■□□□□ 0.73
PRPF18-203ENST00000417658 STARD7Q9NQZ5 370 aa19.62■□□□□ 0.73
PRPF18-203ENST00000417658 ELP1O95163 1332 aa19.61■□□□□ 0.73
PRPF18-203ENST00000417658 DNAJC25-GNG10A0A024R161 153 aa19.61■□□□□ 0.73
PRPF18-203ENST00000417658 DUSP11O75319 330 aaKnown RBP19.61■□□□□ 0.73
PRPF18-203ENST00000417658 TIMP1P01033 207 aa19.61■□□□□ 0.73
PRPF18-203ENST00000417658 GRIN2CQ14957 1233 aa19.61■□□□□ 0.73
PRPF18-203ENST00000417658 KCNA10Q16322 511 aa19.61■□□□□ 0.73
PRPF18-203ENST00000417658 ZNF467Q7Z7K2 595 aaPredicted RBP19.61■□□□□ 0.73
PRPF18-203ENST00000417658 DDX11Q96FC9 970 aa19.61■□□□□ 0.73
PRPF18-203ENST00000417658 SLF1Q9BQI6 1058 aa19.61■□□□□ 0.73
PRPF18-203ENST00000417658 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.61■□□□□ 0.73
PRPF18-203ENST00000417658 SLC4A4Q9Y6R1 1079 aa19.61■□□□□ 0.73
PRPF18-203ENST00000417658 SYNRGQ9UMZ2 1314 aa19.6■□□□□ 0.73
PRPF18-203ENST00000417658 ATP2A1O14983 1001 aa19.6■□□□□ 0.73
PRPF18-203ENST00000417658 SNAI1O95863 264 aaPredicted RBP19.6■□□□□ 0.73
PRPF18-203ENST00000417658 DNAJB2P25686 324 aa19.6■□□□□ 0.73
PRPF18-203ENST00000417658 ZSCAN25Q6NSZ9 544 aa19.6■□□□□ 0.73
PRPF18-203ENST00000417658 SIRT2Q8IXJ6 389 aa19.6■□□□□ 0.73
PRPF18-203ENST00000417658 PRPF38AQ8NAV1 312 aaKnown RBP19.6■□□□□ 0.73
PRPF18-203ENST00000417658 LENG1Q96BZ8 264 aaPredicted RBP19.6■□□□□ 0.73
PRPF18-203ENST00000417658 TBX21Q9UL17 535 aa19.6■□□□□ 0.73
PRPF18-203ENST00000417658 MROH7Q68CQ1 1323 aa19.59■□□□□ 0.73
PRPF18-203ENST00000417658 RAD21O60216 631 aa19.59■□□□□ 0.73
PRPF18-203ENST00000417658 CST5P28325 142 aaPredicted RBP19.59■□□□□ 0.73
PRPF18-203ENST00000417658 CDK7P50613 346 aa19.59■□□□□ 0.73
PRPF18-203ENST00000417658 HNRNPUQ00839 825 aaKnown RBP eCLIP19.59■□□□□ 0.73
PRPF18-203ENST00000417658 MFSD5Q6N075 450 aa19.59■□□□□ 0.73
PRPF18-203ENST00000417658 PCSK9Q8NBP7 692 aaKnown RBP19.59■□□□□ 0.73
PRPF18-203ENST00000417658 GLT1D1Q96MS3 346 aa19.59■□□□□ 0.73
PRPF18-203ENST00000417658 ZNF576Q9H609 170 aa19.59■□□□□ 0.73
PRPF18-203ENST00000417658 NYAP2Q9P242 653 aa19.59■□□□□ 0.73
PRPF18-203ENST00000417658 ARPP21Q9UBL0 812 aaPredicted RBP19.59■□□□□ 0.73
PRPF18-203ENST00000417658 F5H6K3 240 aa19.58■□□□□ 0.72
PRPF18-203ENST00000417658 KLRC3Q07444 240 aa19.58■□□□□ 0.72
PRPF18-203ENST00000417658 SBK1Q52WX2 424 aa19.58■□□□□ 0.72
PRPF18-203ENST00000417658 SNRNP48Q6IEG0 339 aaKnown RBP19.58■□□□□ 0.72
PRPF18-203ENST00000417658 CCDC174Q6PII3 467 aa19.58■□□□□ 0.72
PRPF18-203ENST00000417658 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.58■□□□□ 0.72
PRPF18-203ENST00000417658 ZBTB40Q9NUA8 1239 aa19.58■□□□□ 0.72
PRPF18-203ENST00000417658 RIPK3Q9Y572 518 aa19.58■□□□□ 0.72
PRPF18-203ENST00000417658 SPTBN5Q9NRC6 3674 aaKnown RBP19.58■□□□□ 0.72
PRPF18-203ENST00000417658 CHGBP05060 677 aa19.57■□□□□ 0.72
PRPF18-203ENST00000417658 PPIGQ13427 754 aaKnown RBP eCLIP19.57■□□□□ 0.721e-6■■■■□ 25.5
PRPF18-203ENST00000417658 ACVR2BQ13705 512 aa19.57■□□□□ 0.72
PRPF18-203ENST00000417658 GIMAP6Q6P9H5 292 aa19.57■□□□□ 0.72
PRPF18-203ENST00000417658 TIFAQ96CG3 184 aa19.57■□□□□ 0.72
PRPF18-203ENST00000417658 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.57■□□□□ 0.72
PRPF18-203ENST00000417658 PUS7LQ9H0K6 701 aaKnown RBP19.57■□□□□ 0.72
PRPF18-203ENST00000417658 BCL11AQ9H165 835 aa19.57■□□□□ 0.72
PRPF18-203ENST00000417658 ABHD16BQ9H3Z7 469 aa19.57■□□□□ 0.72
PRPF18-203ENST00000417658 SPC25Q9HBM1 224 aa19.57■□□□□ 0.72
PRPF18-203ENST00000417658 DDX19BQ9UMR2 479 aa19.57■□□□□ 0.72
PRPF18-203ENST00000417658 ZBED4O75132 1171 aa19.56■□□□□ 0.72
PRPF18-203ENST00000417658 RASA1P20936 1047 aa19.56■□□□□ 0.72
PRPF18-203ENST00000417658 TJAP1Q5JTD0 557 aa19.56■□□□□ 0.72
PRPF18-203ENST00000417658 RASIP1Q5U651 963 aa19.56■□□□□ 0.72
PRPF18-203ENST00000417658 STRBPQ96SI9 672 aaKnown RBP19.56■□□□□ 0.72
PRPF18-203ENST00000417658 NUP88Q99567 741 aaPredicted RBP19.56■□□□□ 0.72
PRPF18-203ENST00000417658 ZHX1Q9UKY1 873 aaPredicted RBP19.56■□□□□ 0.72
PRPF18-203ENST00000417658 NDUFB10O96000 172 aa19.55■□□□□ 0.72
PRPF18-203ENST00000417658 ASGR1P07306 291 aa19.55■□□□□ 0.72
PRPF18-203ENST00000417658 C6orf222P0C671 652 aaPredicted RBP19.55■□□□□ 0.72
PRPF18-203ENST00000417658 GJA9P57773 515 aa19.55■□□□□ 0.72
PRPF18-203ENST00000417658 TMEM240Q5SV17 173 aa19.55■□□□□ 0.72
PRPF18-203ENST00000417658 C16orf59Q7L2K0 433 aa19.55■□□□□ 0.72
PRPF18-203ENST00000417658 UPF3AQ9H1J1 476 aaKnown RBP19.55■□□□□ 0.72
PRPF18-203ENST00000417658 CHMP4BQ9H444 224 aaKnown RBP19.55■□□□□ 0.72
PRPF18-203ENST00000417658 MKNK2Q9HBH9 465 aa19.55■□□□□ 0.72
PRPF18-203ENST00000417658 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.55■□□□□ 0.72
PRPF18-203ENST00000417658 FBXO40Q9UH90 709 aa19.55■□□□□ 0.72
PRPF18-203ENST00000417658 SYNPO2Q9UMS6 1093 aa19.55■□□□□ 0.72
PRPF18-203ENST00000417658 MYADML2A6NDP7 307 aa19.54■□□□□ 0.72
PRPF18-203ENST00000417658 ARVCFO00192 962 aa19.54■□□□□ 0.72
PRPF18-203ENST00000417658 OAZ1P54368 228 aa19.54■□□□□ 0.72
PRPF18-203ENST00000417658 NKX3-2P78367 333 aa19.54■□□□□ 0.72
PRPF18-203ENST00000417658 CCDC144BQ3MJ40 725 aa19.54■□□□□ 0.72
PRPF18-203ENST00000417658 CPXCR1Q8N123 301 aa19.54■□□□□ 0.72
PRPF18-203ENST00000417658 TMEM199Q8N511 208 aa19.54■□□□□ 0.72
PRPF18-203ENST00000417658 USP38Q8NB14 1042 aa19.54■□□□□ 0.72
PRPF18-203ENST00000417658 CHST13Q8NET6 341 aa19.54■□□□□ 0.72
PRPF18-203ENST00000417658 MKL1Q969V6 931 aa19.54■□□□□ 0.72
PRPF18-203ENST00000417658 VTI1AQ96AJ9 217 aa19.54■□□□□ 0.72
PRPF18-203ENST00000417658 SLC38A10Q9HBR0 1119 aa19.54■□□□□ 0.72
PRPF18-203ENST00000417658 CTDP1Q9Y5B0 961 aaPredicted RBP19.54■□□□□ 0.72
PRPF18-203ENST00000417658 GREB1LQ9C091 1923 aaPredicted RBP19.54■□□□□ 0.72
PRPF18-203ENST00000417658 A0A0U1RQG5 324 aaPredicted RBP19.53■□□□□ 0.72
PRPF18-203ENST00000417658 GSG1L2A8MUP6 293 aa19.53■□□□□ 0.72
PRPF18-203ENST00000417658 GNASQ5JWF2 1037 aa19.53■□□□□ 0.72
PRPF18-203ENST00000417658 ANKRD35Q8N283 1001 aa19.53■□□□□ 0.72
PRPF18-203ENST00000417658 CLIP2Q9UDT6 1046 aa19.53■□□□□ 0.72
PRPF18-203ENST00000417658 FEM1BQ9UK73 627 aa19.53■□□□□ 0.72
PRPF18-203ENST00000417658 MYO9BQ13459 2157 aa19.53■□□□□ 0.72
PRPF18-203ENST00000417658 MYH7P12883 1935 aa19.53■□□□□ 0.72
PRPF18-203ENST00000417658 IGKV6D-41A0A0C4DH26 115 aa19.52■□□□□ 0.72
PRPF18-203ENST00000417658 ADCY6O43306 1168 aa19.52■□□□□ 0.72
PRPF18-203ENST00000417658 CSF2RAP15509 400 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms