RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 SCG2P13521 617 aa15.28■□□□□ 0.04
GTF2F1-201ENST00000394456 PBX1P40424 430 aa15.28■□□□□ 0.04
GTF2F1-201ENST00000394456 PDXDC2PQ6P474 469 aa15.28■□□□□ 0.04
GTF2F1-201ENST00000394456 CTCFLQ8NI51 663 aaPredicted RBP15.28■□□□□ 0.04
GTF2F1-201ENST00000394456 CD209Q9NNX6 404 aa15.28■□□□□ 0.04
GTF2F1-201ENST00000394456 POLLQ9UGP5 575 aa15.28■□□□□ 0.04
GTF2F1-201ENST00000394456 DLEC1Q9Y238 1755 aa15.28■□□□□ 0.04
GTF2F1-201ENST00000394456 SASH3O75995 380 aa15.27■□□□□ 0.04
GTF2F1-201ENST00000394456 KANK3Q6NY19 840 aa15.27■□□□□ 0.04
GTF2F1-201ENST00000394456 CCDC12Q8WUD4 166 aaPredicted RBP15.27■□□□□ 0.04
GTF2F1-201ENST00000394456 ARPP21Q9UBL0 812 aaPredicted RBP15.27■□□□□ 0.04
GTF2F1-201ENST00000394456 C6orf229H3BNL8 230 aa15.27■□□□□ 0.03
GTF2F1-201ENST00000394456 MAP3K9P80192 1104 aa15.27■□□□□ 0.03
GTF2F1-201ENST00000394456 PPP2R3AQ06190 1150 aa15.27■□□□□ 0.03
GTF2F1-201ENST00000394456 KRT31Q15323 416 aa15.27■□□□□ 0.03
GTF2F1-201ENST00000394456 TERF2Q15554 542 aa15.27■□□□□ 0.03
GTF2F1-201ENST00000394456 TMEM60Q9H2L4 133 aa15.27■□□□□ 0.03
GTF2F1-201ENST00000394456 TFR2Q9UP52 801 aa15.27■□□□□ 0.03
GTF2F1-201ENST00000394456 MRFAP1Q9Y605 127 aa15.27■□□□□ 0.03
GTF2F1-201ENST00000394456 ADGRG1Q9Y653 693 aa15.27■□□□□ 0.03
GTF2F1-201ENST00000394456 GOLGA8HP0CJ92 632 aa15.26■□□□□ 0.03
GTF2F1-201ENST00000394456 TFAP4Q01664 338 aa15.26■□□□□ 0.03
GTF2F1-201ENST00000394456 FCHSD1Q86WN1 690 aa15.26■□□□□ 0.03
GTF2F1-201ENST00000394456 TGFBRAP1Q8WUH2 860 aa15.26■□□□□ 0.03
GTF2F1-201ENST00000394456 RBM28Q9NW13 759 aaKnown RBP15.26■□□□□ 0.03
GTF2F1-201ENST00000394456 ANKRD31Q8N7Z5 1873 aa15.26■□□□□ 0.03
GTF2F1-201ENST00000394456 CDK5RAP2Q96SN8 1893 aa15.26■□□□□ 0.03
GTF2F1-201ENST00000394456 CCP110O43303 1012 aa15.26■□□□□ 0.03
GTF2F1-201ENST00000394456 MYO1BO43795 1136 aa15.26■□□□□ 0.03
GTF2F1-201ENST00000394456 DDAH1O94760 285 aa15.26■□□□□ 0.03
GTF2F1-201ENST00000394456 PMS1P54277 932 aaKnown RBP15.26■□□□□ 0.03
GTF2F1-201ENST00000394456 FERMT2Q96AC1 680 aa15.26■□□□□ 0.03
GTF2F1-201ENST00000394456 SAP30BPQ9UHR5 308 aaKnown RBP15.26■□□□□ 0.03
GTF2F1-201ENST00000394456 PUF60Q9UHX1 559 aaKnown RBP15.26■□□□□ 0.03
GTF2F1-201ENST00000394456 ORC4O43929 436 aa15.25■□□□□ 0.03
GTF2F1-201ENST00000394456 ZRANB2O95218 330 aaKnown RBP eCLIP15.25■□□□□ 0.03
GTF2F1-201ENST00000394456 ATP2B4P23634 1241 aa15.25■□□□□ 0.03
GTF2F1-201ENST00000394456 ERVK-24P63145 666 aa15.25■□□□□ 0.03
GTF2F1-201ENST00000394456 MAPKAPK5Q8IW41 473 aa15.25■□□□□ 0.03
GTF2F1-201ENST00000394456 C4orf32Q8N8J7 132 aa15.25■□□□□ 0.03
GTF2F1-201ENST00000394456 TBC1D16Q8TBP0 767 aa15.25■□□□□ 0.03
GTF2F1-201ENST00000394456 ZCCHC17Q9NP64 241 aaKnown RBP15.25■□□□□ 0.03
GTF2F1-201ENST00000394456 NAV1Q8NEY1 1877 aa15.25■□□□□ 0.03
GTF2F1-201ENST00000394456 RIMBP2O15034 1052 aa15.25■□□□□ 0.03
GTF2F1-201ENST00000394456 MFAP3LO75121 409 aa15.25■□□□□ 0.03
GTF2F1-201ENST00000394456 PFKFB3Q16875 520 aaPredicted RBP15.25■□□□□ 0.03
GTF2F1-201ENST00000394456 PPFIBP1Q86W92 1011 aa15.25■□□□□ 0.03
GTF2F1-201ENST00000394456 ERICH4A6NGS2 130 aa15.24■□□□□ 0.03
GTF2F1-201ENST00000394456 NKRFO15226 690 aaKnown RBP eCLIP15.24■□□□□ 0.03
GTF2F1-201ENST00000394456 BBOX1O75936 387 aa15.24■□□□□ 0.03
GTF2F1-201ENST00000394456 PCP11498 1178 aaKnown RBP15.24■□□□□ 0.03
GTF2F1-201ENST00000394456 SBK1Q52WX2 424 aa15.24■□□□□ 0.03
GTF2F1-201ENST00000394456 COL23A1Q86Y22 540 aaPredicted RBP15.24■□□□□ 0.03
GTF2F1-201ENST00000394456 CCDC34Q96HJ3 373 aa15.24■□□□□ 0.03
GTF2F1-201ENST00000394456 GSDMAQ96QA5 445 aa15.24■□□□□ 0.03
GTF2F1-201ENST00000394456 BRMS1Q9HCU9 246 aa15.24■□□□□ 0.03
GTF2F1-201ENST00000394456 TRIM10Q9UDY6 481 aa15.24■□□□□ 0.03
GTF2F1-201ENST00000394456 MKRN1Q9UHC7 482 aaKnown RBP15.24■□□□□ 0.03
GTF2F1-201ENST00000394456 POLR3GO15318 223 aaPredicted RBP15.24■□□□□ 0.03
GTF2F1-201ENST00000394456 CYTH3O43739 400 aa15.24■□□□□ 0.03
GTF2F1-201ENST00000394456 APBA3O96018 575 aa15.24■□□□□ 0.03
GTF2F1-201ENST00000394456 PRCPP42785 496 aa15.24■□□□□ 0.03
GTF2F1-201ENST00000394456 DHX8Q14562 1220 aaKnown RBP15.24■□□□□ 0.03
GTF2F1-201ENST00000394456 MFSD14BQ5SR56 506 aa15.24■□□□□ 0.03
GTF2F1-201ENST00000394456 C12orf60Q5U649 245 aa15.24■□□□□ 0.03
GTF2F1-201ENST00000394456 NELFBQ8WX92 580 aa15.24■□□□□ 0.03
GTF2F1-201ENST00000394456 NOL10Q9BSC4 688 aaKnown RBP15.24■□□□□ 0.03
GTF2F1-201ENST00000394456 N4BP3O15049 544 aa15.23■□□□□ 0.03
GTF2F1-201ENST00000394456 BAG3O95817 575 aa15.23■□□□□ 0.03
GTF2F1-201ENST00000394456 HOXA10P31260 410 aaPredicted RBP15.23■□□□□ 0.03
GTF2F1-201ENST00000394456 BTDP43251 543 aa15.23■□□□□ 0.03
GTF2F1-201ENST00000394456 GSTO1P78417 241 aa15.23■□□□□ 0.03
GTF2F1-201ENST00000394456 NAALADL2Q58DX5 795 aa15.23■□□□□ 0.03
GTF2F1-201ENST00000394456 C15orf52Q6ZUT6 534 aaKnown RBP15.23■□□□□ 0.03
GTF2F1-201ENST00000394456 RTFDC1Q9BY42 306 aaPredicted RBP15.23■□□□□ 0.03
GTF2F1-201ENST00000394456 EFCAB8A8MWE9 144 aa15.23■□□□□ 0.03
GTF2F1-201ENST00000394456 PPEF1O14829 653 aaPredicted RBP15.23■□□□□ 0.03
GTF2F1-201ENST00000394456 CCDC175P0C221 793 aa15.23■□□□□ 0.03
GTF2F1-201ENST00000394456 INF2Q27J81 1249 aa15.23■□□□□ 0.03
GTF2F1-201ENST00000394456 ZNF569Q5MCW4 686 aa15.23■□□□□ 0.03
GTF2F1-201ENST00000394456 IRF2BP1Q8IU81 584 aa15.23■□□□□ 0.03
GTF2F1-201ENST00000394456 IQUBQ8NA54 791 aa15.23■□□□□ 0.03
GTF2F1-201ENST00000394456 PNMA1Q8ND90 353 aa15.23■□□□□ 0.03
GTF2F1-201ENST00000394456 PANX2Q96RD6 677 aa15.23■□□□□ 0.03
GTF2F1-201ENST00000394456 CHP1Q99653 195 aa15.23■□□□□ 0.03
GTF2F1-201ENST00000394456 PARD6BQ9BYG5 372 aa15.23■□□□□ 0.03
GTF2F1-201ENST00000394456 CALM1P0DP23 149 aa15.23■□□□□ 0.03
GTF2F1-201ENST00000394456 CALM2P0DP24 149 aa15.23■□□□□ 0.03
GTF2F1-201ENST00000394456 CALM3P0DP25 149 aa15.23■□□□□ 0.03
GTF2F1-201ENST00000394456 IL1R1P14778 569 aa15.23■□□□□ 0.03
GTF2F1-201ENST00000394456 GABPB1Q06547 395 aaPredicted RBP15.23■□□□□ 0.03
GTF2F1-201ENST00000394456 PPP2R5BQ15173 497 aa15.23■□□□□ 0.03
GTF2F1-201ENST00000394456 MSL1Q68DK7 614 aa15.23■□□□□ 0.03
GTF2F1-201ENST00000394456 TMCO3Q6UWJ1 677 aa15.23■□□□□ 0.03
GTF2F1-201ENST00000394456 GPIHBP1Q8IV16 184 aa15.23■□□□□ 0.03
GTF2F1-201ENST00000394456 BLIDQ8IZY5 108 aa15.23■□□□□ 0.03
GTF2F1-201ENST00000394456 TBC1D8O95759 1140 aa15.22■□□□□ 0.03
GTF2F1-201ENST00000394456 RPN1P04843 607 aaKnown RBP15.22■□□□□ 0.03
GTF2F1-201ENST00000394456 GYS2P54840 703 aa15.22■□□□□ 0.03
GTF2F1-201ENST00000394456 BMS1Q14692 1282 aaKnown RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms