RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 PDE2AO00408 941 aaPredicted RBP0□□□□□ -2.41
TRAJ28-201ENST00000390509 SOX1O00570 391 aaPredicted RBP0□□□□□ -2.41
TRAJ28-201ENST00000390509 TMPRSS2O15393 492 aa0□□□□□ -2.41
TRAJ28-201ENST00000390509 FOXS1O43638 330 aa0□□□□□ -2.41
TRAJ28-201ENST00000390509 B3GALT2O43825 422 aa0□□□□□ -2.41
TRAJ28-201ENST00000390509 RNGTTO60942 597 aaKnown RBP0□□□□□ -2.41
TRAJ28-201ENST00000390509 USP2O75604 605 aaPredicted RBP0□□□□□ -2.41
TRAJ28-201ENST00000390509 RAD17O75943 681 aa0□□□□□ -2.41
TRAJ28-201ENST00000390509 IGKV3-20P01619 116 aa0□□□□□ -2.41
TRAJ28-201ENST00000390509 SERPINB2P05120 415 aa0□□□□□ -2.41
TRAJ28-201ENST00000390509 FBXO45P0C2W1 286 aa0□□□□□ -2.41
TRAJ28-201ENST00000390509 TGFB3P10600 412 aa0□□□□□ -2.41
TRAJ28-201ENST00000390509 HCLS1P14317 486 aaPredicted RBP0□□□□□ -2.41
TRAJ28-201ENST00000390509 ATF2P15336 505 aa0□□□□□ -2.41
TRAJ28-201ENST00000390509 ACO1P21399 889 aaKnown RBP0□□□□□ -2.41
TRAJ28-201ENST00000390509 SDHBP21912 280 aa0□□□□□ -2.41
TRAJ28-201ENST00000390509 RPL13P26373 211 aaKnown RBP0□□□□□ -2.41
TRAJ28-201ENST00000390509 MAOBP27338 520 aa0□□□□□ -2.41
TRAJ28-201ENST00000390509 PTGS2P35354 604 aa0□□□□□ -2.41
TRAJ28-201ENST00000390509 THBS2P35442 1172 aa0□□□□□ -2.41
TRAJ28-201ENST00000390509 SCNN1AP37088 669 aa0□□□□□ -2.41
TRAJ28-201ENST00000390509 KIR2DL1P43626 348 aaPredicted RBP0□□□□□ -2.41
TRAJ28-201ENST00000390509 KIR2DL2P43627 348 aaPredicted RBP0□□□□□ -2.41
TRAJ28-201ENST00000390509 KIR3DL1P43629 444 aa0□□□□□ -2.41
TRAJ28-201ENST00000390509 MAPK8P45983 427 aa0□□□□□ -2.41
TRAJ28-201ENST00000390509 EPHA4P54764 986 aa0□□□□□ -2.41
TRAJ28-201ENST00000390509 FGD1P98174 961 aa0□□□□□ -2.41
TRAJ28-201ENST00000390509 ID3Q02535 119 aa0□□□□□ -2.41
TRAJ28-201ENST00000390509 NHLH1Q02575 133 aa0□□□□□ -2.41
TRAJ28-201ENST00000390509 CTDSPL2Q05D32 466 aa0□□□□□ -2.41
TRAJ28-201ENST00000390509 EGR3Q06889 387 aa0□□□□□ -2.41
TRAJ28-201ENST00000390509 ADCY1Q08828 1119 aa0□□□□□ -2.41
TRAJ28-201ENST00000390509 GRM2Q14416 872 aa0□□□□□ -2.41
TRAJ28-201ENST00000390509 PDE3AQ14432 1141 aa0□□□□□ -2.41
TRAJ28-201ENST00000390509 TTLL4Q14679 1199 aa0□□□□□ -2.41
TRAJ28-201ENST00000390509 CBX2Q14781 532 aaPredicted RBP0□□□□□ -2.41
TRAJ28-201ENST00000390509 NR1I3Q14994 352 aa0□□□□□ -2.41
TRAJ28-201ENST00000390509 PTPAQ15257 358 aa0□□□□□ -2.41
TRAJ28-201ENST00000390509 POU4F3Q15319 338 aa0□□□□□ -2.41
TRAJ28-201ENST00000390509 QPCTQ16769 361 aa0□□□□□ -2.41
TRAJ28-201ENST00000390509 MST1LQ2TV78 715 aa0□□□□□ -2.41
TRAJ28-201ENST00000390509 GAB4Q2WGN9 574 aa0□□□□□ -2.41
TRAJ28-201ENST00000390509 OXLD1Q5BKU9 147 aa0□□□□□ -2.41
TRAJ28-201ENST00000390509 XKR4Q5GH76 650 aa0□□□□□ -2.41
TRAJ28-201ENST00000390509 COL13A1Q5TAT6 717 aaPredicted RBP0□□□□□ -2.41
TRAJ28-201ENST00000390509 AGBL4Q5VU57 503 aa0□□□□□ -2.41
TRAJ28-201ENST00000390509 KIAA1614Q5VZ46 1190 aa0□□□□□ -2.41
TRAJ28-201ENST00000390509 HGSNATQ68CP4 663 aa0□□□□□ -2.41
TRAJ28-201ENST00000390509 AWAT2Q6E213 333 aa0□□□□□ -2.41
TRAJ28-201ENST00000390509 TCTN3Q6NUS6 607 aa0□□□□□ -2.41
TRAJ28-201ENST00000390509 PKN3Q6P5Z2 889 aa0□□□□□ -2.41
TRAJ28-201ENST00000390509 ADAMTSL4Q6UY14 1074 aa0□□□□□ -2.41
TRAJ28-201ENST00000390509 RPTNQ6XPR3 784 aa0□□□□□ -2.41
TRAJ28-201ENST00000390509 POLNQ7Z5Q5 900 aa0□□□□□ -2.41
TRAJ28-201ENST00000390509 NLRP13Q86W25 1043 aa0□□□□□ -2.41
TRAJ28-201ENST00000390509 NCAPG2Q86XI2 1143 aa0□□□□□ -2.41
TRAJ28-201ENST00000390509 SYNE4Q8N205 404 aa0□□□□□ -2.41
TRAJ28-201ENST00000390509 ZBTB38Q8NAP3 1195 aaPredicted RBP0□□□□□ -2.41
TRAJ28-201ENST00000390509 TXNDC5Q8NBS9 432 aaKnown RBP0□□□□□ -2.41
TRAJ28-201ENST00000390509 PROCA1Q8NCQ7 364 aaPredicted RBP0□□□□□ -2.41
TRAJ28-201ENST00000390509 GIMAP8Q8ND71 665 aaPredicted RBP0□□□□□ -2.41
TRAJ28-201ENST00000390509 OR13H1Q8NG92 308 aa0□□□□□ -2.41
TRAJ28-201ENST00000390509 DDX54Q8TDD1 881 aaKnown RBP0□□□□□ -2.41
TRAJ28-201ENST00000390509 FRS2Q8WU20 508 aa0□□□□□ -2.41
TRAJ28-201ENST00000390509 IGFBPL1Q8WX77 278 aa0□□□□□ -2.41
TRAJ28-201ENST00000390509 BSNDQ8WZ55 320 aa0□□□□□ -2.41
TRAJ28-201ENST00000390509 ARHGEF1Q92888 912 aaKnown RBP0□□□□□ -2.41
TRAJ28-201ENST00000390509 ISL2Q96A47 359 aa0□□□□□ -2.41
TRAJ28-201ENST00000390509 EAF1Q96JC9 268 aaPredicted RBP0□□□□□ -2.41
TRAJ28-201ENST00000390509 FANCD2OSQ96PS1 177 aa0□□□□□ -2.41
TRAJ28-201ENST00000390509 CCDC85AQ96PX6 553 aaPredicted RBP0□□□□□ -2.41
TRAJ28-201ENST00000390509 CTAGE1Q96RT6 745 aa0□□□□□ -2.41
TRAJ28-201ENST00000390509 CORO1BQ9BR76 489 aa0□□□□□ -2.41
TRAJ28-201ENST00000390509 HERPUD2Q9BSE4 406 aa0□□□□□ -2.41
TRAJ28-201ENST00000390509 WDR18Q9BV38 432 aa0□□□□□ -2.41
TRAJ28-201ENST00000390509 NRSN2Q9GZP1 204 aa0□□□□□ -2.41
TRAJ28-201ENST00000390509 TOR3AQ9H497 397 aa0□□□□□ -2.41
TRAJ28-201ENST00000390509 EBF3Q9H4W6 596 aa0□□□□□ -2.41
TRAJ28-201ENST00000390509 ANTXR1Q9H6X2 564 aa0□□□□□ -2.41
TRAJ28-201ENST00000390509 SEC61A2Q9H9S3 476 aa0□□□□□ -2.41
TRAJ28-201ENST00000390509 SSU72Q9NP77 194 aaKnown RBP0□□□□□ -2.41
TRAJ28-201ENST00000390509 TNFRSF12AQ9NP84 129 aa0□□□□□ -2.41
TRAJ28-201ENST00000390509 GPATCH2Q9NW75 528 aa0□□□□□ -2.41
TRAJ28-201ENST00000390509 SPATA6Q9NWH7 488 aaPredicted RBP0□□□□□ -2.41
TRAJ28-201ENST00000390509 FOXJ2Q9P0K8 574 aa0□□□□□ -2.41
TRAJ28-201ENST00000390509 CEP72Q9P209 647 aa0□□□□□ -2.41
TRAJ28-201ENST00000390509 RBPJLQ9UBG7 517 aa0□□□□□ -2.41
TRAJ28-201ENST00000390509 DUSP13Q9UII6 198 aa0□□□□□ -2.41
TRAJ28-201ENST00000390509 TBC1D30Q9Y2I9 924 aa0□□□□□ -2.41
TRAJ28-201ENST00000390509 HCN4Q9Y3Q4 1203 aa0□□□□□ -2.41
TRAJ28-201ENST00000390509 CCDC9Q9Y3X0 531 aaKnown RBP0□□□□□ -2.41
TRAJ28-201ENST00000390509 SMAD5-AS1Q9Y6J3 95 aa0□□□□□ -2.41
TRAJ28-201ENST00000390509 TAF6LQ9Y6J9 622 aa0□□□□□ -2.41
TRAJ28-201ENST00000390509 ZNF521Q96K83 1311 aa-0.01□□□□□ -2.41
TRAJ28-201ENST00000390509 IGKV6D-21A0A0A0MT36 114 aa-0.01□□□□□ -2.41
TRAJ28-201ENST00000390509 IGKV3D-20A0A0C4DH25 116 aa-0.01□□□□□ -2.41
TRAJ28-201ENST00000390509 MYMKA6NI61 221 aa-0.01□□□□□ -2.41
TRAJ28-201ENST00000390509 WTIPA6NIX2 430 aaPredicted RBP-0.01□□□□□ -2.41
TRAJ28-201ENST00000390509 NOTOA8MTQ0 251 aa-0.01□□□□□ -2.41
TRAJ28-201ENST00000390509 PRR33A8MZF0 331 aa-0.01□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms