RNA–Protein interactions for RNA: ENST00000372478.4

C9orf50-201, Transcript of chromosome 9 open reading frame 50, humanhuman

APPRIS P2 TSL 2 BASIC

Gene C9orf50, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf50-201ENST00000372478 TMEM87BQ96K49 555 aa29.51■■■□□ 2.31
C9orf50-201ENST00000372478 SPATC1LQ9H0A9 340 aa29.51■■■□□ 2.31
C9orf50-201ENST00000372478 SH2B2O14492 632 aaPredicted RBP29.5■■■□□ 2.31
C9orf50-201ENST00000372478 CCNA1P78396 465 aa29.5■■■□□ 2.31
C9orf50-201ENST00000372478 MOV10L1Q9BXT6 1211 aaKnown RBP29.5■■■□□ 2.31
C9orf50-201ENST00000372478 PLA2G6O60733 806 aa29.49■■■□□ 2.31
C9orf50-201ENST00000372478 DHX32Q7L7V1 743 aaKnown RBP29.49■■■□□ 2.31
C9orf50-201ENST00000372478 MTA3Q9BTC8 594 aa29.49■■■□□ 2.31
C9orf50-201ENST00000372478 PRR12Q9ULL5 1215 aa29.49■■■□□ 2.31
C9orf50-201ENST00000372478 ZBED4O75132 1171 aa29.49■■■□□ 2.31
C9orf50-201ENST00000372478 SNAP25P60880 206 aa29.49■■■□□ 2.31
C9orf50-201ENST00000372478 EXOSC10Q01780 885 aaKnown RBP29.49■■■□□ 2.31
C9orf50-201ENST00000372478 WDR78Q5VTH9 848 aa29.49■■■□□ 2.31
C9orf50-201ENST00000372478 ZNF214Q9UL59 606 aaPredicted RBP29.49■■■□□ 2.31
C9orf50-201ENST00000372478 CTDP1Q9Y5B0 961 aaPredicted RBP29.49■■■□□ 2.31
C9orf50-201ENST00000372478 GNRH1P01148 92 aa29.48■■■□□ 2.31
C9orf50-201ENST00000372478 MAPK4P31152 587 aa29.48■■■□□ 2.31
C9orf50-201ENST00000372478 CPXCR1Q8N123 301 aa29.48■■■□□ 2.31
C9orf50-201ENST00000372478 CPVLQ9H3G5 476 aa29.48■■■□□ 2.31
C9orf50-201ENST00000372478 SLC38A10Q9HBR0 1119 aa29.48■■■□□ 2.31
C9orf50-201ENST00000372478 SRRDQ9UH36 339 aa29.48■■■□□ 2.31
C9orf50-201ENST00000372478 GABRQQ9UN88 632 aa29.48■■■□□ 2.31
C9orf50-201ENST00000372478 PRKCZQ05513 592 aa29.47■■■□□ 2.31
C9orf50-201ENST00000372478 GPATCH4Q5T3I0 446 aaKnown RBP29.47■■■□□ 2.31
C9orf50-201ENST00000372478 SYDE2Q5VT97 1194 aa29.47■■■□□ 2.31
C9orf50-201ENST00000372478 BTNL9Q6UXG8 535 aa29.47■■■□□ 2.31
C9orf50-201ENST00000372478 TNS4Q8IZW8 715 aa29.47■■■□□ 2.31
C9orf50-201ENST00000372478 COA7Q96BR5 231 aa29.47■■■□□ 2.31
C9orf50-201ENST00000372478 CWC22Q9HCG8 908 aaKnown RBP29.47■■■□□ 2.31
C9orf50-201ENST00000372478 PTPN22Q9Y2R2 807 aa29.47■■■□□ 2.31
C9orf50-201ENST00000372478 PLXNB2O15031 1838 aa29.47■■■□□ 2.31
C9orf50-201ENST00000372478 HMGB1P09429 215 aaKnown RBP29.46■■■□□ 2.31
C9orf50-201ENST00000372478 PARP1P09874 1014 aaKnown RBP29.46■■■□□ 2.31
C9orf50-201ENST00000372478 HOXD10P28358 340 aa29.46■■■□□ 2.31
C9orf50-201ENST00000372478 STAT3P40763 770 aa29.46■■■□□ 2.31
C9orf50-201ENST00000372478 PKN2Q16513 984 aaKnown RBP29.46■■■□□ 2.31
C9orf50-201ENST00000372478 BLOC1S2Q6QNY1 142 aa29.46■■■□□ 2.31
C9orf50-201ENST00000372478 NFXL1Q6ZNB6 911 aa29.46■■■□□ 2.31
C9orf50-201ENST00000372478 RAVER2Q9HCJ3 691 aaKnown RBP29.46■■■□□ 2.31
C9orf50-201ENST00000372478 WDR19Q8NEZ3 1342 aa29.46■■■□□ 2.31
C9orf50-201ENST00000372478 EIF5BO60841 1220 aaKnown RBP29.45■■■□□ 2.31
C9orf50-201ENST00000372478 ERCC3P19447 782 aa29.45■■■□□ 2.31
C9orf50-201ENST00000372478 SLC4A3P48751 1232 aa29.45■■■□□ 2.31
C9orf50-201ENST00000372478 ASPRV1Q53RT3 343 aa29.45■■■□□ 2.31
C9orf50-201ENST00000372478 FBXO46Q6PJ61 603 aaPredicted RBP29.45■■■□□ 2.31
C9orf50-201ENST00000372478 GPR142Q7Z601 462 aa29.45■■■□□ 2.31
C9orf50-201ENST00000372478 CATIPQ7Z7H3 387 aa29.45■■■□□ 2.31
C9orf50-201ENST00000372478 MYL10Q9BUA6 226 aa29.45■■■□□ 2.31
C9orf50-201ENST00000372478 UBA5Q9GZZ9 404 aa29.45■■■□□ 2.31
C9orf50-201ENST00000372478 PTCH2Q9Y6C5 1203 aa29.45■■■□□ 2.31
C9orf50-201ENST00000372478 CASTP20810 708 aaKnown RBP29.45■■■□□ 2.3
C9orf50-201ENST00000372478 LIFRP42702 1097 aa29.45■■■□□ 2.3
C9orf50-201ENST00000372478 TROAPQ12815 778 aa29.45■■■□□ 2.3
C9orf50-201ENST00000372478 PLEKHH3Q7Z736 793 aa29.45■■■□□ 2.3
C9orf50-201ENST00000372478 NCAPG2Q86XI2 1143 aa29.45■■■□□ 2.3
C9orf50-201ENST00000372478 ZNF654Q8IZM8 581 aa29.45■■■□□ 2.3
C9orf50-201ENST00000372478 STAG2Q8N3U4 1231 aa29.45■■■□□ 2.3
C9orf50-201ENST00000372478 CCDC69A6NI79 296 aa29.44■■■□□ 2.3
C9orf50-201ENST00000372478 PSMA5P28066 241 aa29.44■■■□□ 2.3
C9orf50-201ENST00000372478 SNRNP48Q6IEG0 339 aaKnown RBP29.44■■■□□ 2.3
C9orf50-201ENST00000372478 CCDC174Q6PII3 467 aa29.44■■■□□ 2.3
C9orf50-201ENST00000372478 TMTC2Q8N394 836 aa29.44■■■□□ 2.3
C9orf50-201ENST00000372478 NUP133Q8WUM0 1156 aa29.44■■■□□ 2.3
C9orf50-201ENST00000372478 TEX13BQ9BXU2 312 aa29.44■■■□□ 2.3
C9orf50-201ENST00000372478 FDX1P10109 184 aa29.43■■■□□ 2.3
C9orf50-201ENST00000372478 FLT3LGP49771 235 aa29.43■■■□□ 2.3
C9orf50-201ENST00000372478 GRM4Q14833 912 aa29.43■■■□□ 2.3
C9orf50-201ENST00000372478 RIOX2Q8IUF8 465 aa29.43■■■□□ 2.3
C9orf50-201ENST00000372478 SHCBP1Q8NEM2 672 aa29.43■■■□□ 2.3
C9orf50-201ENST00000372478 MAD2L2Q9UI95 211 aa29.43■■■□□ 2.3
C9orf50-201ENST00000372478 RPS6KB1P23443 525 aa29.42■■■□□ 2.3
C9orf50-201ENST00000372478 RAB11FIP4Q86YS3 637 aa29.42■■■□□ 2.3
C9orf50-201ENST00000372478 RIPK3Q9Y572 518 aa29.42■■■□□ 2.3
C9orf50-201ENST00000372478 HTTP42858 3142 aa29.42■■■□□ 2.3
C9orf50-201ENST00000372478 PRMT2P55345 433 aa29.42■■■□□ 2.3
C9orf50-201ENST00000372478 RANBP17Q9H2T7 1088 aaKnown RBP29.42■■■□□ 2.3
C9orf50-201ENST00000372478 GJD2Q9UKL4 321 aa29.42■■■□□ 2.3
C9orf50-201ENST00000372478 ZNF536O15090 1300 aa29.42■■■□□ 2.3
C9orf50-201ENST00000372478 PALM3A6NDB9 673 aaPredicted RBP29.41■■■□□ 2.3
C9orf50-201ENST00000372478 ATP2A1O14983 1001 aa29.41■■■□□ 2.3
C9orf50-201ENST00000372478 SLC25A27O95847 323 aa29.41■■■□□ 2.3
C9orf50-201ENST00000372478 FGD1P98174 961 aa29.41■■■□□ 2.3
C9orf50-201ENST00000372478 RAET1EQ8TD07 263 aa29.41■■■□□ 2.3
C9orf50-201ENST00000372478 AGBL1Q96MI9 1066 aa29.41■■■□□ 2.3
C9orf50-201ENST00000372478 MROH8Q9H579 483 aa29.41■■■□□ 2.3
C9orf50-201ENST00000372478 UPF2Q9HAU5 1272 aaKnown RBP29.41■■■□□ 2.3
C9orf50-201ENST00000372478 IVNS1ABPQ9Y6Y0 642 aa29.41■■■□□ 2.3
C9orf50-201ENST00000372478 SMCHD1A6NHR9 2005 aa29.4■■■□□ 2.3
C9orf50-201ENST00000372478 KLRF2D3W0D1 207 aa29.4■■■□□ 2.3
C9orf50-201ENST00000372478 DDAH1O94760 285 aa29.4■■■□□ 2.3
C9orf50-201ENST00000372478 RXRAP19793 462 aa29.4■■■□□ 2.3
C9orf50-201ENST00000372478 OAZ1P54368 228 aa29.4■■■□□ 2.3
C9orf50-201ENST00000372478 Q6ZUG5 572 aa29.4■■■□□ 2.3
C9orf50-201ENST00000372478 SGMS1Q86VZ5 419 aa29.4■■■□□ 2.3
C9orf50-201ENST00000372478 SLC12A7Q9Y666 1083 aa29.4■■■□□ 2.3
C9orf50-201ENST00000372478 TAL1P17542 331 aaPredicted RBP29.39■■■□□ 2.3
C9orf50-201ENST00000372478 PTPREP23469 700 aa29.39■■■□□ 2.3
C9orf50-201ENST00000372478 UPF3BQ9BZI7 483 aaKnown RBP29.39■■■□□ 2.3
C9orf50-201ENST00000372478 ZSWIM6Q9HCJ5 1215 aa29.39■■■□□ 2.3
C9orf50-201ENST00000372478 HPS5Q9UPZ3 1129 aa29.39■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms