RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 CYBAP13498 195 aa18.26■□□□□ 0.51
UBE3B-211ENST00000539843 FAM83BQ5T0W9 1011 aa18.26■□□□□ 0.51
UBE3B-211ENST00000539843 GDF15Q99988 308 aa18.26■□□□□ 0.51
UBE3B-211ENST00000539843 FSD1Q9BTV5 496 aa18.26■□□□□ 0.51
UBE3B-211ENST00000539843 UBE2OQ9C0C9 1292 aaKnown RBP18.26■□□□□ 0.51
UBE3B-211ENST00000539843 PPP1R9AQ9ULJ8 1098 aa18.26■□□□□ 0.51
UBE3B-211ENST00000539843 GSG1L2A8MUP6 293 aa18.25■□□□□ 0.51
UBE3B-211ENST00000539843 SEPT4O43236 478 aa18.25■□□□□ 0.51
UBE3B-211ENST00000539843 MYCNP04198 464 aaPredicted RBP18.25■□□□□ 0.51
UBE3B-211ENST00000539843 STAT3P40763 770 aa18.25■□□□□ 0.51
UBE3B-211ENST00000539843 PDE4BQ07343 736 aa18.25■□□□□ 0.51
UBE3B-211ENST00000539843 KIAA1755Q5JYT7 1200 aa18.25■□□□□ 0.51
UBE3B-211ENST00000539843 PPP4R3BQ5MIZ7 849 aa18.25■□□□□ 0.51
UBE3B-211ENST00000539843 TSHZ3Q63HK5 1081 aa18.25■□□□□ 0.51
UBE3B-211ENST00000539843 RIOX2Q8IUF8 465 aa18.25■□□□□ 0.51
UBE3B-211ENST00000539843 SIAH1Q8IUQ4 282 aa18.25■□□□□ 0.51
UBE3B-211ENST00000539843 STK11IPQ8N1F8 1099 aa18.25■□□□□ 0.51
UBE3B-211ENST00000539843 OSBP2Q969R2 916 aa18.25■□□□□ 0.51
UBE3B-211ENST00000539843 LBHD1Q9BQE6 289 aaPredicted RBP18.25■□□□□ 0.51
UBE3B-211ENST00000539843 SLF1Q9BQI6 1058 aa18.25■□□□□ 0.51
UBE3B-211ENST00000539843 NYAP2Q9P242 653 aa18.25■□□□□ 0.51
UBE3B-211ENST00000539843 NRBP1Q9UHY1 535 aa18.25■□□□□ 0.51
UBE3B-211ENST00000539843 ROBO3Q96MS0 1386 aa18.25■□□□□ 0.51
UBE3B-211ENST00000539843 ZNF236Q9UL36 1845 aa18.25■□□□□ 0.51
UBE3B-211ENST00000539843 BAZ2AQ9UIF9 1905 aaKnown RBP18.25■□□□□ 0.51
UBE3B-211ENST00000539843 VWA5AO00534 786 aa18.24■□□□□ 0.51
UBE3B-211ENST00000539843 MAGEA10P43363 369 aaPredicted RBP18.24■□□□□ 0.51
UBE3B-211ENST00000539843 TMEM132BQ14DG7 1078 aa18.24■□□□□ 0.51
UBE3B-211ENST00000539843 MAML3Q96JK9 1138 aa18.24■□□□□ 0.51
UBE3B-211ENST00000539843 NAPBQ9H115 298 aa18.24■□□□□ 0.51
UBE3B-211ENST00000539843 A0A0G2JMZ2 1700 aa18.23■□□□□ 0.51
UBE3B-211ENST00000539843 PATL2C9JE40 543 aaKnown RBP18.23■□□□□ 0.51
UBE3B-211ENST00000539843 RASA1P20936 1047 aa18.23■□□□□ 0.51
UBE3B-211ENST00000539843 LRRC26Q2I0M4 334 aa18.23■□□□□ 0.51
UBE3B-211ENST00000539843 TDHQ8IZJ6 230 aa18.23■□□□□ 0.51
UBE3B-211ENST00000539843 TEX13BQ9BXU2 312 aa18.23■□□□□ 0.51
UBE3B-211ENST00000539843 ISY1Q9ULR0 285 aaKnown RBP18.23■□□□□ 0.51
UBE3B-211ENST00000539843 SYNPO2Q9UMS6 1093 aa18.23■□□□□ 0.51
UBE3B-211ENST00000539843 F5H6K3 240 aa18.22■□□□□ 0.51
UBE3B-211ENST00000539843 COBLO75128 1261 aa18.22■□□□□ 0.51
UBE3B-211ENST00000539843 ZBED4O75132 1171 aa18.22■□□□□ 0.51
UBE3B-211ENST00000539843 TSPY3P0CV98 308 aa18.22■□□□□ 0.51
UBE3B-211ENST00000539843 TSPY8P0CW00 308 aa18.22■□□□□ 0.51
UBE3B-211ENST00000539843 MX1P20591 662 aa18.22■□□□□ 0.51
UBE3B-211ENST00000539843 KLRC3Q07444 240 aa18.22■□□□□ 0.51
UBE3B-211ENST00000539843 IFNL3Q8IZI9 196 aa18.22■□□□□ 0.51
UBE3B-211ENST00000539843 PRPF38AQ8NAV1 312 aaKnown RBP18.22■□□□□ 0.51
UBE3B-211ENST00000539843 FBXO28Q9NVF7 368 aa18.22■□□□□ 0.51
UBE3B-211ENST00000539843 CLIP2Q9UDT6 1046 aa18.22■□□□□ 0.51
UBE3B-211ENST00000539843 ADAMTS5Q9UNA0 930 aa18.22■□□□□ 0.51
UBE3B-211ENST00000539843 CNPY2Q9Y2B0 182 aa18.22■□□□□ 0.51
UBE3B-211ENST00000539843 DIS3Q9Y2L1 958 aaKnown RBP18.22■□□□□ 0.51
UBE3B-211ENST00000539843 SMIM22K7EJ46 135 aa18.21■□□□□ 0.51
UBE3B-211ENST00000539843 M0R2C6 588 aa18.21■□□□□ 0.51
UBE3B-211ENST00000539843 TTLL1O95922 423 aa18.21■□□□□ 0.51
UBE3B-211ENST00000539843 RARBP10826 455 aa18.21■□□□□ 0.51
UBE3B-211ENST00000539843 ATN1P54259 1190 aaPredicted RBP18.21■□□□□ 0.51
UBE3B-211ENST00000539843 GJC2Q5T442 439 aaPredicted RBP18.21■□□□□ 0.51
UBE3B-211ENST00000539843 GPR153Q6NV75 609 aa18.21■□□□□ 0.51
UBE3B-211ENST00000539843 TRPV1Q8NER1 839 aa18.21■□□□□ 0.51
UBE3B-211ENST00000539843 DDX11Q96FC9 970 aa18.21■□□□□ 0.51
UBE3B-211ENST00000539843 NDUFB10O96000 172 aa18.2■□□□□ 0.5
UBE3B-211ENST00000539843 RRP1P56182 461 aaKnown RBP18.2■□□□□ 0.5
UBE3B-211ENST00000539843 SNRNP48Q6IEG0 339 aaKnown RBP18.2■□□□□ 0.5
UBE3B-211ENST00000539843 RNF180Q86T96 592 aa18.2■□□□□ 0.5
UBE3B-211ENST00000539843 FEM1BQ9UK73 627 aa18.2■□□□□ 0.5
UBE3B-211ENST00000539843 ZNF214Q9UL59 606 aaPredicted RBP18.2■□□□□ 0.5
UBE3B-211ENST00000539843 ALPK3Q96L96 1907 aa18.19■□□□□ 0.5
UBE3B-211ENST00000539843 PRDM1O75626 825 aa18.19■□□□□ 0.5
UBE3B-211ENST00000539843 FDX1P10109 184 aa18.19■□□□□ 0.5
UBE3B-211ENST00000539843 RTP1P59025 263 aa18.19■□□□□ 0.5
UBE3B-211ENST00000539843 LRIT3Q3SXY7 679 aa18.19■□□□□ 0.5
UBE3B-211ENST00000539843 MSL3Q8N5Y2 521 aaKnown RBP18.19■□□□□ 0.5
UBE3B-211ENST00000539843 KIFC2Q96AC6 838 aa18.19■□□□□ 0.5
UBE3B-211ENST00000539843 TINF2Q9BSI4 451 aa18.19■□□□□ 0.5
UBE3B-211ENST00000539843 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.19■□□□□ 0.5
UBE3B-211ENST00000539843 EPB41L4AQ9HCS5 686 aaPredicted RBP18.19■□□□□ 0.5
UBE3B-211ENST00000539843 XPNPEP3Q9NQH7 507 aa18.19■□□□□ 0.5
UBE3B-211ENST00000539843 FBXO40Q9UH90 709 aa18.19■□□□□ 0.5
UBE3B-211ENST00000539843 ATP11BQ9Y2G3 1177 aa18.19■□□□□ 0.5
UBE3B-211ENST00000539843 IGHA2P01877 340 aa18.18■□□□□ 0.5
UBE3B-211ENST00000539843 PGK2P07205 417 aa18.18■□□□□ 0.5
UBE3B-211ENST00000539843 AKR1A1P14550 325 aa18.18■□□□□ 0.5
UBE3B-211ENST00000539843 SLC4A3P48751 1232 aa18.18■□□□□ 0.5
UBE3B-211ENST00000539843 MDM2Q00987 491 aaPredicted RBP18.18■□□□□ 0.5
UBE3B-211ENST00000539843 IKQ13123 557 aaPredicted RBP18.18■□□□□ 0.5
UBE3B-211ENST00000539843 ANO1Q5XXA6 986 aa18.18■□□□□ 0.5
UBE3B-211ENST00000539843 CPXCR1Q8N123 301 aa18.18■□□□□ 0.5
UBE3B-211ENST00000539843 PI4K2BQ8TCG2 481 aa18.18■□□□□ 0.5
UBE3B-211ENST00000539843 CEP95Q96GE4 821 aa18.18■□□□□ 0.5
UBE3B-211ENST00000539843 NUP88Q99567 741 aaPredicted RBP18.18■□□□□ 0.5
UBE3B-211ENST00000539843 MTMR4Q9NYA4 1195 aa18.18■□□□□ 0.5
UBE3B-211ENST00000539843 PCDHB15Q9Y5E8 787 aa18.18■□□□□ 0.5
UBE3B-211ENST00000539843 PPARAQ07869 468 aa18.17■□□□□ 0.5
UBE3B-211ENST00000539843 ZNF792Q3KQV3 632 aa18.17■□□□□ 0.5
UBE3B-211ENST00000539843 ZMYM1Q5SVZ6 1142 aa18.17■□□□□ 0.5
UBE3B-211ENST00000539843 PRAMEF19Q5SWL8 479 aa18.17■□□□□ 0.5
UBE3B-211ENST00000539843 ANKRD45Q5TZF3 282 aa18.17■□□□□ 0.5
UBE3B-211ENST00000539843 GMCL1P1Q8NEA9 526 aa18.17■□□□□ 0.5
UBE3B-211ENST00000539843 MKL1Q969V6 931 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms