RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 PPP4CP60510 307 aa28.28■■■□□ 2.12
RAB40C-204ENST00000538492 E2F4Q16254 413 aa28.28■■■□□ 2.12
RAB40C-204ENST00000538492 SLC35G1Q2M3R5 365 aa28.28■■■□□ 2.12
RAB40C-204ENST00000538492 TMEM139Q8IV31 216 aa28.28■■■□□ 2.12
RAB40C-204ENST00000538492 ROBO3Q96MS0 1386 aa28.28■■■□□ 2.12
RAB40C-204ENST00000538492 RTFDC1Q9BY42 306 aaPredicted RBP28.28■■■□□ 2.12
RAB40C-204ENST00000538492 NAV1Q8NEY1 1877 aa28.28■■■□□ 2.12
RAB40C-204ENST00000538492 BTDP43251 543 aa28.28■■■□□ 2.12
RAB40C-204ENST00000538492 CUL4BQ13620 913 aa28.28■■■□□ 2.12
RAB40C-204ENST00000538492 RASGRP2Q7LDG7 609 aa28.28■■■□□ 2.12
RAB40C-204ENST00000538492 IQUBQ8NA54 791 aa28.28■■■□□ 2.12
RAB40C-204ENST00000538492 CD209Q9NNX6 404 aa28.28■■■□□ 2.12
RAB40C-204ENST00000538492 PCDHA4Q9UN74 947 aa28.28■■■□□ 2.12
RAB40C-204ENST00000538492 ZBTB22O15209 634 aa28.27■■■□□ 2.12
RAB40C-204ENST00000538492 ANKS1AQ92625 1134 aa28.27■■■□□ 2.12
RAB40C-204ENST00000538492 COBLO75128 1261 aa28.27■■■□□ 2.12
RAB40C-204ENST00000538492 LDHCP07864 332 aa28.27■■■□□ 2.12
RAB40C-204ENST00000538492 GOLGA8HP0CJ92 632 aa28.27■■■□□ 2.12
RAB40C-204ENST00000538492 CYTH3O43739 400 aa28.26■■■□□ 2.11
RAB40C-204ENST00000538492 RASA1P20936 1047 aa28.26■■■□□ 2.11
RAB40C-204ENST00000538492 SPATA1Q5VX52 437 aa28.26■■■□□ 2.11
RAB40C-204ENST00000538492 HEATR3Q7Z4Q2 680 aa28.26■■■□□ 2.11
RAB40C-204ENST00000538492 GJD4Q96KN9 370 aaPredicted RBP28.26■■■□□ 2.11
RAB40C-204ENST00000538492 TMEM47Q9BQJ4 181 aa28.26■■■□□ 2.11
RAB40C-204ENST00000538492 NR1I3Q14994 352 aa28.26■■■□□ 2.11
RAB40C-204ENST00000538492 WWC2Q6AWC2 1192 aa28.26■■■□□ 2.11
RAB40C-204ENST00000538492 TC2NQ8N9U0 490 aa28.26■■■□□ 2.11
RAB40C-204ENST00000538492 BAG1Q99933 345 aaPredicted RBP28.26■■■□□ 2.11
RAB40C-204ENST00000538492 PPP1R3GB7ZBB8 358 aa28.25■■■□□ 2.11
RAB40C-204ENST00000538492 MTRQ99707 1265 aa28.25■■■□□ 2.11
RAB40C-204ENST00000538492 CPVLQ9H3G5 476 aa28.25■■■□□ 2.11
RAB40C-204ENST00000538492 SH3GLB2Q9NR46 395 aa28.25■■■□□ 2.11
RAB40C-204ENST00000538492 TEX33O43247 280 aa28.25■■■□□ 2.11
RAB40C-204ENST00000538492 PDXDC2PQ6P474 469 aa28.25■■■□□ 2.11
RAB40C-204ENST00000538492 CCP110O43303 1012 aa28.24■■■□□ 2.11
RAB40C-204ENST00000538492 C4orf32Q8N8J7 132 aa28.24■■■□□ 2.11
RAB40C-204ENST00000538492 A0A1B0GTH6 734 aa28.24■■■□□ 2.11
RAB40C-204ENST00000538492 CCDC194A0A1B0GVG4 234 aa28.24■■■□□ 2.11
RAB40C-204ENST00000538492 ARHGAP6O43182 974 aa28.24■■■□□ 2.11
RAB40C-204ENST00000538492 DNAI1Q9UI46 699 aa28.24■■■□□ 2.11
RAB40C-204ENST00000538492 GGA1Q9UJY5 639 aa28.24■■■□□ 2.11
RAB40C-204ENST00000538492 GYS1P13807 737 aa28.23■■■□□ 2.11
RAB40C-204ENST00000538492 GNAQP50148 359 aa28.23■■■□□ 2.11
RAB40C-204ENST00000538492 C15orf52Q6ZUT6 534 aaKnown RBP28.23■■■□□ 2.11
RAB40C-204ENST00000538492 REXO1L1PQ8IX06 675 aa28.23■■■□□ 2.11
RAB40C-204ENST00000538492 TCP11L1Q9NUJ3 509 aa28.23■■■□□ 2.11
RAB40C-204ENST00000538492 CTNND2Q9UQB3 1225 aa28.23■■■□□ 2.11
RAB40C-204ENST00000538492 CDK5RAP2Q96SN8 1893 aa28.23■■■□□ 2.11
RAB40C-204ENST00000538492 SLU7O95391 586 aaKnown RBP28.23■■■□□ 2.11
RAB40C-204ENST00000538492 SERPINB2P05120 415 aa28.23■■■□□ 2.11
RAB40C-204ENST00000538492 ETF1P62495 437 aaKnown RBP28.23■■■□□ 2.11
RAB40C-204ENST00000538492 APTXQ7Z2E3 356 aaKnown RBP28.23■■■□□ 2.11
RAB40C-204ENST00000538492 TEX11Q8IYF3 940 aa28.23■■■□□ 2.11
RAB40C-204ENST00000538492 CCDC178Q5BJE1 867 aa28.22■■■□□ 2.11
RAB40C-204ENST00000538492 PCDHA6Q9UN73 950 aa28.22■■■□□ 2.11
RAB40C-204ENST00000538492 PCDHA8Q9Y5H6 950 aa28.22■■■□□ 2.11
RAB40C-204ENST00000538492 ST5P78524 1137 aa28.22■■■□□ 2.11
RAB40C-204ENST00000538492 KARSQ15046 597 aaKnown RBP28.22■■■□□ 2.11
RAB40C-204ENST00000538492 CRY2Q49AN0 593 aa28.22■■■□□ 2.11
RAB40C-204ENST00000538492 CT47A1Q5JQC4 288 aaPredicted RBP28.22■■■□□ 2.11
RAB40C-204ENST00000538492 ARL6IP4Q66PJ3 421 aaKnown RBP28.22■■■□□ 2.11
RAB40C-204ENST00000538492 PPP2R2CQ9Y2T4 447 aa28.22■■■□□ 2.11
RAB40C-204ENST00000538492 M0R2N6 131 aa28.21■■■□□ 2.11
RAB40C-204ENST00000538492 CDK8P49336 464 aa28.21■■■□□ 2.11
RAB40C-204ENST00000538492 INF2Q27J81 1249 aa28.21■■■□□ 2.11
RAB40C-204ENST00000538492 MFSD14BQ5SR56 506 aa28.21■■■□□ 2.11
RAB40C-204ENST00000538492 MEX3CQ5U5Q3 659 aaKnown RBP28.21■■■□□ 2.11
RAB40C-204ENST00000538492 ERO1AQ96HE7 468 aa28.21■■■□□ 2.11
RAB40C-204ENST00000538492 EYA3Q99504 573 aa28.21■■■□□ 2.11
RAB40C-204ENST00000538492 SPDYE4A6NLX3 237 aa28.21■■■□□ 2.11
RAB40C-204ENST00000538492 CBX1P83916 185 aa28.21■■■□□ 2.11
RAB40C-204ENST00000538492 RRAGBQ5VZM2 374 aa28.21■■■□□ 2.11
RAB40C-204ENST00000538492 TRIM65Q6PJ69 517 aa28.21■■■□□ 2.11
RAB40C-204ENST00000538492 FAM177A1Q8N128 213 aaPredicted RBP28.21■■■□□ 2.11
RAB40C-204ENST00000538492 CERKQ8TCT0 537 aa28.21■■■□□ 2.11
RAB40C-204ENST00000538492 PALM3A6NDB9 673 aaPredicted RBP28.2■■■□□ 2.11
RAB40C-204ENST00000538492 ATP2B4P23634 1241 aa28.2■■■□□ 2.11
RAB40C-204ENST00000538492 LONP1P36776 959 aaKnown RBP28.2■■■□□ 2.11
RAB40C-204ENST00000538492 CDKAL1Q5VV42 579 aa28.2■■■□□ 2.11
RAB40C-204ENST00000538492 L2HGDHQ9H9P8 463 aa28.2■■■□□ 2.11
RAB40C-204ENST00000538492 GPR75-ASB3A0A0A6YYF3 556 aa28.2■■■□□ 2.1
RAB40C-204ENST00000538492 KLRF2D3W0D1 207 aa28.2■■■□□ 2.1
RAB40C-204ENST00000538492 STXBP3O00186 592 aa28.2■■■□□ 2.1
RAB40C-204ENST00000538492 IGSF3O75054 1194 aa28.2■■■□□ 2.1
RAB40C-204ENST00000538492 ELF2Q15723 593 aa28.2■■■□□ 2.1
RAB40C-204ENST00000538492 TOGARAM2Q6ZUX3 1019 aa28.2■■■□□ 2.1
RAB40C-204ENST00000538492 RBM17Q96I25 401 aaKnown RBP28.2■■■□□ 2.1
RAB40C-204ENST00000538492 BARHL2Q9NY43 387 aa28.2■■■□□ 2.1
RAB40C-204ENST00000538492 POLLQ9UGP5 575 aa28.2■■■□□ 2.1
RAB40C-204ENST00000538492 PP2D1A8MPX8 630 aa28.19■■■□□ 2.1
RAB40C-204ENST00000538492 ZSCAN12O43309 604 aa28.19■■■□□ 2.1
RAB40C-204ENST00000538492 STX10O60499 249 aa28.19■■■□□ 2.1
RAB40C-204ENST00000538492 IL1R1P14778 569 aa28.19■■■□□ 2.1
RAB40C-204ENST00000538492 ADRA2BP18089 450 aa28.19■■■□□ 2.1
RAB40C-204ENST00000538492 NT5C2P49902 561 aa28.19■■■□□ 2.1
RAB40C-204ENST00000538492 CCDC148Q8NFR7 591 aa28.19■■■□□ 2.1
RAB40C-204ENST00000538492 TMEM60Q9H2L4 133 aa28.19■■■□□ 2.1
RAB40C-204ENST00000538492 FLT1P17948 1338 aa28.19■■■□□ 2.1
RAB40C-204ENST00000538492 GTPBP6O43824 516 aaPredicted RBP28.19■■■□□ 2.1
RAB40C-204ENST00000538492 FCHSD1Q86WN1 690 aa28.19■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms