RNA–Protein interactions for RNA: ENST00000521951.1

PVT1-212, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,535 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-212ENST00000521951 CAPNS2Q96L46 248 aa28.2■■■□□ 2.1
PVT1-212ENST00000521951 CCL15-CCL14A0A0B4J2E2 113 aa28.19■■■□□ 2.1
PVT1-212ENST00000521951 WDR46O15213 610 aaKnown RBP28.19■■■□□ 2.1
PVT1-212ENST00000521951 LARGE1O95461 756 aa28.19■■■□□ 2.1
PVT1-212ENST00000521951 BMP3P12645 472 aa28.19■■■□□ 2.1
PVT1-212ENST00000521951 MCM2P49736 904 aa28.19■■■□□ 2.1
PVT1-212ENST00000521951 CCL15Q16663 113 aa28.19■■■□□ 2.1
PVT1-212ENST00000521951 ME3Q16798 604 aa28.19■■■□□ 2.1
PVT1-212ENST00000521951 FAM83BQ5T0W9 1011 aa28.19■■■□□ 2.1
PVT1-212ENST00000521951 FANCBQ8NB91 859 aa28.19■■■□□ 2.1
PVT1-212ENST00000521951 TSHZ2Q9NRE2 1034 aa28.19■■■□□ 2.1
PVT1-212ENST00000521951 PARP1P09874 1014 aaKnown RBP28.18■■■□□ 2.1
PVT1-212ENST00000521951 ZNF543Q08ER8 600 aa28.18■■■□□ 2.1
PVT1-212ENST00000521951 STK3Q13188 491 aa28.18■■■□□ 2.1
PVT1-212ENST00000521951 CCDC96Q2M329 555 aa28.18■■■□□ 2.1
PVT1-212ENST00000521951 KCTD1Q719H9 257 aa28.18■■■□□ 2.1
PVT1-212ENST00000521951 BRI3BPQ8WY22 251 aa28.18■■■□□ 2.1
PVT1-212ENST00000521951 MAD2L2Q9UI95 211 aa28.18■■■□□ 2.1
PVT1-212ENST00000521951 FRMPD2Q68DX3 1309 aaPredicted RBP28.18■■■□□ 2.1
PVT1-212ENST00000521951 MANSC4A6NHS7 340 aaPredicted RBP28.18■■■□□ 2.1
PVT1-212ENST00000521951 GOLGA8AA7E2F4 631 aa28.18■■■□□ 2.1
PVT1-212ENST00000521951 GOLGA8HP0CJ92 632 aa28.18■■■□□ 2.1
PVT1-212ENST00000521951 METAP2P50579 478 aaKnown RBP eCLIP28.18■■■□□ 2.1
PVT1-212ENST00000521951 TREML2Q5T2D2 321 aa28.18■■■□□ 2.1
PVT1-212ENST00000521951 STAG2Q8N3U4 1231 aa28.18■■■□□ 2.1
PVT1-212ENST00000521951 CTCFLQ8NI51 663 aaPredicted RBP28.18■■■□□ 2.1
PVT1-212ENST00000521951 SNX21Q969T3 373 aa28.18■■■□□ 2.1
PVT1-212ENST00000521951 ZSCAN31Q96LW9 406 aaPredicted RBP28.18■■■□□ 2.1
PVT1-212ENST00000521951 RPAP3Q9H6T3 665 aaPredicted RBP28.18■■■□□ 2.1
PVT1-212ENST00000521951 GPCPD1Q9NPB8 672 aa28.18■■■□□ 2.1
PVT1-212ENST00000521951 TESPA1A2RU30 521 aaPredicted RBP28.17■■■□□ 2.1
PVT1-212ENST00000521951 PALM3A6NDB9 673 aaPredicted RBP28.17■■■□□ 2.1
PVT1-212ENST00000521951 PFKFB2O60825 505 aa28.17■■■□□ 2.1
PVT1-212ENST00000521951 CCT2P78371 535 aaKnown RBP28.17■■■□□ 2.1
PVT1-212ENST00000521951 ASPRV1Q53RT3 343 aa28.17■■■□□ 2.1
PVT1-212ENST00000521951 GPAT2Q6NUI2 795 aa28.17■■■□□ 2.1
PVT1-212ENST00000521951 ZIC5Q96T25 663 aa28.17■■■□□ 2.1
PVT1-212ENST00000521951 FAM217BQ9NTX9 383 aaPredicted RBP28.17■■■□□ 2.1
PVT1-212ENST00000521951 ISY1Q9ULR0 285 aaKnown RBP28.17■■■□□ 2.1
PVT1-212ENST00000521951 RTN1Q16799 776 aa28.16■■■□□ 2.1
PVT1-212ENST00000521951 GPATCH4Q5T3I0 446 aaKnown RBP28.16■■■□□ 2.1
PVT1-212ENST00000521951 SLKQ9H2G2 1235 aaPredicted RBP28.16■■■□□ 2.1
PVT1-212ENST00000521951 AGTPBP1Q9UPW5 1226 aa28.16■■■□□ 2.1
PVT1-212ENST00000521951 NID2Q14112 1375 aa28.16■■■□□ 2.1
PVT1-212ENST00000521951 TMEM232C9JQI7 657 aa28.15■■■□□ 2.1
PVT1-212ENST00000521951 CDC27P30260 824 aa28.15■■■□□ 2.1
PVT1-212ENST00000521951 KIF5BP33176 963 aa28.15■■■□□ 2.1
PVT1-212ENST00000521951 KIF23Q02241 960 aaPredicted RBP28.15■■■□□ 2.1
PVT1-212ENST00000521951 NOGQ13253 232 aa28.15■■■□□ 2.1
PVT1-212ENST00000521951 TTBK2Q6IQ55 1244 aa28.15■■■□□ 2.1
PVT1-212ENST00000521951 USP17L15C9J2P7 530 aa28.14■■■□□ 2.1
PVT1-212ENST00000521951 USP17L13C9JLJ4 530 aa28.14■■■□□ 2.1
PVT1-212ENST00000521951 USP17L11C9JVI0 530 aa28.14■■■□□ 2.1
PVT1-212ENST00000521951 USP17L18D6R9N7 530 aa28.14■■■□□ 2.1
PVT1-212ENST00000521951 USP17L22D6RA61 530 aa28.14■■■□□ 2.1
PVT1-212ENST00000521951 USP17L17D6RBQ6 530 aa28.14■■■□□ 2.1
PVT1-212ENST00000521951 USP17L19D6RCP7 530 aa28.14■■■□□ 2.1
PVT1-212ENST00000521951 USP17L20D6RJB6 530 aa28.14■■■□□ 2.1
PVT1-212ENST00000521951 AOC2O75106 756 aa28.14■■■□□ 2.1
PVT1-212ENST00000521951 USP17L24Q0WX57 530 aa28.14■■■□□ 2.1
PVT1-212ENST00000521951 PPP2R5BQ15173 497 aa28.14■■■□□ 2.1
PVT1-212ENST00000521951 CATSPERGQ6ZRH7 1159 aa28.14■■■□□ 2.1
PVT1-212ENST00000521951 NECAB1Q8N987 351 aa28.14■■■□□ 2.1
PVT1-212ENST00000521951 PTPN18Q99952 460 aa28.14■■■□□ 2.1
PVT1-212ENST00000521951 TANGO6Q9C0B7 1094 aa28.14■■■□□ 2.1
PVT1-212ENST00000521951 WDR33Q9C0J8 1336 aaKnown RBP28.14■■■□□ 2.1
PVT1-212ENST00000521951 NCOA5Q9HCD5 579 aaKnown RBP28.14■■■□□ 2.1
PVT1-212ENST00000521951 BTBD19C9JJ37 291 aa28.13■■■□□ 2.09
PVT1-212ENST00000521951 KLRF2D3W0D1 207 aa28.13■■■□□ 2.09
PVT1-212ENST00000521951 HOXA7P31268 230 aaPredicted RBP28.13■■■□□ 2.09
PVT1-212ENST00000521951 ADD1P35611 737 aaKnown RBP28.13■■■□□ 2.09
PVT1-212ENST00000521951 VEGFBP49765 207 aa28.13■■■□□ 2.09
PVT1-212ENST00000521951 INHBEP58166 350 aa28.13■■■□□ 2.09
PVT1-212ENST00000521951 SCRN1Q12765 414 aa28.13■■■□□ 2.09
PVT1-212ENST00000521951 TMX3Q96JJ7 454 aa28.13■■■□□ 2.09
PVT1-212ENST00000521951 SH2B1Q9NRF2 756 aaPredicted RBP28.13■■■□□ 2.09
PVT1-212ENST00000521951 RBM28Q9NW13 759 aaKnown RBP28.13■■■□□ 2.09
PVT1-212ENST00000521951 ANKRD23Q86SG2 305 aa28.13■■■□□ 2.09
PVT1-212ENST00000521951 UBA5Q9GZZ9 404 aa28.13■■■□□ 2.09
PVT1-212ENST00000521951 FBXO28Q9NVF7 368 aa28.13■■■□□ 2.09
PVT1-212ENST00000521951 FEM1BQ9UK73 627 aa28.13■■■□□ 2.09
PVT1-212ENST00000521951 PLA2G6O60733 806 aa28.12■■■□□ 2.09
PVT1-212ENST00000521951 PLEKHA8P1O95397 391 aa28.12■■■□□ 2.09
PVT1-212ENST00000521951 SLC16A2P36021 539 aa28.12■■■□□ 2.09
PVT1-212ENST00000521951 GNAQP50148 359 aa28.12■■■□□ 2.09
PVT1-212ENST00000521951 BTNL9Q6UXG8 535 aa28.12■■■□□ 2.09
PVT1-212ENST00000521951 CHURC1Q8WUH1 139 aa28.12■■■□□ 2.09
PVT1-212ENST00000521951 GTF3C6Q969F1 213 aa28.12■■■□□ 2.09
PVT1-212ENST00000521951 CPVLQ9H3G5 476 aa28.12■■■□□ 2.09
PVT1-212ENST00000521951 CCDC196A0A1B0GTZ2 297 aa28.11■■■□□ 2.09
PVT1-212ENST00000521951 STAT2P52630 851 aa28.11■■■□□ 2.09
PVT1-212ENST00000521951 SREBF2Q12772 1141 aa28.11■■■□□ 2.09
PVT1-212ENST00000521951 PABPC4Q13310 644 aaKnown RBP eCLIP28.11■■■□□ 2.09
PVT1-212ENST00000521951 TMTC3Q6ZXV5 915 aa28.11■■■□□ 2.09
PVT1-212ENST00000521951 FAM43AQ8N2R8 423 aa28.11■■■□□ 2.09
PVT1-212ENST00000521951 BAZ2BQ9UIF8 2168 aaKnown RBP28.11■■■□□ 2.09
PVT1-212ENST00000521951 PARP14Q460N5 1801 aa28.11■■■□□ 2.09
PVT1-212ENST00000521951 RLFQ13129 1914 aa28.1■■■□□ 2.09
PVT1-212ENST00000521951 FLOT1O75955 427 aa28.1■■■□□ 2.09
PVT1-212ENST00000521951 TM4SF4P48230 202 aa28.1■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms