RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 ARMC5Q96C12 935 aa16.52■□□□□ 0.24
DDX41-212ENST00000511040 RNF41Q9H4P4 317 aaPredicted RBP16.52■□□□□ 0.24
DDX41-212ENST00000511040 ELNP15502 786 aa16.51■□□□□ 0.23
DDX41-212ENST00000511040 PLS1Q14651 629 aa16.51■□□□□ 0.23
DDX41-212ENST00000511040 RASGRP2Q7LDG7 609 aa16.51■□□□□ 0.23
DDX41-212ENST00000511040 GMCL1P1Q8NEA9 526 aa16.51■□□□□ 0.23
DDX41-212ENST00000511040 CWC22Q9HCG8 908 aaKnown RBP16.51■□□□□ 0.23
DDX41-212ENST00000511040 PPP4R2Q9NY27 417 aa16.51■□□□□ 0.23
DDX41-212ENST00000511040 PARP14Q460N5 1801 aa16.5■□□□□ 0.23
DDX41-212ENST00000511040 B4E1Z4 1266 aa16.5■□□□□ 0.23
DDX41-212ENST00000511040 ADCY3O60266 1144 aa16.5■□□□□ 0.23
DDX41-212ENST00000511040 PCP11498 1178 aaKnown RBP16.5■□□□□ 0.23
DDX41-212ENST00000511040 MAPK4P31152 587 aa16.5■□□□□ 0.23
DDX41-212ENST00000511040 GRK4P32298 578 aa16.5■□□□□ 0.23
DDX41-212ENST00000511040 CCNA1P78396 465 aa16.5■□□□□ 0.23
DDX41-212ENST00000511040 GPR142Q7Z601 462 aa16.5■□□□□ 0.23
DDX41-212ENST00000511040 ZNF333Q96JL9 665 aa16.5■□□□□ 0.23
DDX41-212ENST00000511040 ZKSCAN3Q9BRR0 538 aa16.5■□□□□ 0.23
DDX41-212ENST00000511040 BIN2Q9UBW5 565 aaPredicted RBP16.5■□□□□ 0.23
DDX41-212ENST00000511040 GJD2Q9UKL4 321 aa16.5■□□□□ 0.23
DDX41-212ENST00000511040 PPP1R9AQ9ULJ8 1098 aa16.5■□□□□ 0.23
DDX41-212ENST00000511040 KDM4AO75164 1064 aa16.49■□□□□ 0.23
DDX41-212ENST00000511040 MCCP23508 829 aa16.49■□□□□ 0.23
DDX41-212ENST00000511040 PPP4R3BQ5MIZ7 849 aa16.49■□□□□ 0.23
DDX41-212ENST00000511040 PLEKHH3Q7Z736 793 aa16.49■□□□□ 0.23
DDX41-212ENST00000511040 NBPF11Q86T75 865 aa16.49■□□□□ 0.23
DDX41-212ENST00000511040 ESR2Q92731 530 aa16.49■□□□□ 0.23
DDX41-212ENST00000511040 SLF1Q9BQI6 1058 aa16.49■□□□□ 0.23
DDX41-212ENST00000511040 ESYT1Q9BSJ8 1104 aa16.49■□□□□ 0.23
DDX41-212ENST00000511040 MOV10L1Q9BXT6 1211 aaKnown RBP16.49■□□□□ 0.23
DDX41-212ENST00000511040 SPATC1LQ9H0A9 340 aa16.49■□□□□ 0.23
DDX41-212ENST00000511040 SYNPO2Q9UMS6 1093 aa16.49■□□□□ 0.23
DDX41-212ENST00000511040 U3KPZ7 1027 aaPredicted RBP16.49■□□□□ 0.23
DDX41-212ENST00000511040 A0A0G2JMZ2 1700 aa16.48■□□□□ 0.23
DDX41-212ENST00000511040 PLXNB2O15031 1838 aa16.48■□□□□ 0.23
DDX41-212ENST00000511040 VWA5AO00534 786 aa16.48■□□□□ 0.23
DDX41-212ENST00000511040 BMP3P12645 472 aa16.48■□□□□ 0.23
DDX41-212ENST00000511040 CYP2B6P20813 491 aa16.48■□□□□ 0.23
DDX41-212ENST00000511040 TMEM132BQ14DG7 1078 aa16.48■□□□□ 0.23
DDX41-212ENST00000511040 KIAA1211Q6ZU35 1233 aa16.48■□□□□ 0.23
DDX41-212ENST00000511040 MB21D1Q8N884 522 aa16.48■□□□□ 0.23
DDX41-212ENST00000511040 KIFC2Q96AC6 838 aa16.48■□□□□ 0.23
DDX41-212ENST00000511040 TMEM47Q9BQJ4 181 aa16.48■□□□□ 0.23
DDX41-212ENST00000511040 TCP11L1Q9NUJ3 509 aa16.48■□□□□ 0.23
DDX41-212ENST00000511040 TAF6LQ9Y6J9 622 aa16.48■□□□□ 0.23
DDX41-212ENST00000511040 POTEFA5A3E0 1075 aa16.47■□□□□ 0.23
DDX41-212ENST00000511040 CYP21A2P08686 494 aa16.47■□□□□ 0.23
DDX41-212ENST00000511040 TOP1P11387 765 aaKnown RBP16.47■□□□□ 0.23
DDX41-212ENST00000511040 ERCC3P19447 782 aa16.47■□□□□ 0.23
DDX41-212ENST00000511040 SLC1A4P43007 532 aa16.47■□□□□ 0.23
DDX41-212ENST00000511040 NOVP48745 357 aa16.47■□□□□ 0.23
DDX41-212ENST00000511040 IRF5Q13568 498 aa16.47■□□□□ 0.23
DDX41-212ENST00000511040 MTFR1Q15390 333 aa16.47■□□□□ 0.23
DDX41-212ENST00000511040 KCTD1Q719H9 257 aa16.47■□□□□ 0.23
DDX41-212ENST00000511040 NCAPG2Q86XI2 1143 aa16.47■□□□□ 0.23
DDX41-212ENST00000511040 SLAIN1Q8ND83 568 aa16.47■□□□□ 0.23
DDX41-212ENST00000511040 GMCL1Q96IK5 515 aa16.47■□□□□ 0.23
DDX41-212ENST00000511040 NUDT12Q9BQG2 462 aa16.47■□□□□ 0.23
DDX41-212ENST00000511040 ADAMTS5Q9UNA0 930 aa16.47■□□□□ 0.23
DDX41-212ENST00000511040 RBM8AQ9Y5S9 174 aaKnown RBP16.47■□□□□ 0.23
DDX41-212ENST00000511040 COL11A1P12107 1806 aaPredicted RBP16.47■□□□□ 0.23
DDX41-212ENST00000511040 TMEM232C9JQI7 657 aa16.46■□□□□ 0.23
DDX41-212ENST00000511040 SLC4A3P48751 1232 aa16.46■□□□□ 0.23
DDX41-212ENST00000511040 IKQ13123 557 aaPredicted RBP16.46■□□□□ 0.23
DDX41-212ENST00000511040 CCDC96Q2M329 555 aa16.46■□□□□ 0.23
DDX41-212ENST00000511040 MORN1Q5T089 497 aa16.46■□□□□ 0.23
DDX41-212ENST00000511040 ERICH6BQ5W0A0 696 aa16.46■□□□□ 0.23
DDX41-212ENST00000511040 RCSD1Q6JBY9 416 aa16.46■□□□□ 0.23
DDX41-212ENST00000511040 SOCS4Q8WXH5 440 aa16.46■□□□□ 0.23
DDX41-212ENST00000511040 MAP4K1Q92918 833 aa16.46■□□□□ 0.23
DDX41-212ENST00000511040 KRT23Q9C075 422 aa16.46■□□□□ 0.23
DDX41-212ENST00000511040 LSG1Q9H089 658 aaKnown RBP16.46■□□□□ 0.23
DDX41-212ENST00000511040 ZSWIM5Q9P217 1185 aa16.46■□□□□ 0.23
DDX41-212ENST00000511040 FEM1BQ9UK73 627 aa16.46■□□□□ 0.23
DDX41-212ENST00000511040 CDC45O75419 566 aa16.45■□□□□ 0.22
DDX41-212ENST00000511040 INHAP05111 366 aa16.45■□□□□ 0.22
DDX41-212ENST00000511040 PTPREP23469 700 aa16.45■□□□□ 0.22
DDX41-212ENST00000511040 CPXCR1Q8N123 301 aa16.45■□□□□ 0.22
DDX41-212ENST00000511040 PRPF38AQ8NAV1 312 aaKnown RBP16.45■□□□□ 0.22
DDX41-212ENST00000511040 REPS2Q8NFH8 660 aa16.45■□□□□ 0.22
DDX41-212ENST00000511040 TMEM106CQ9BVX2 250 aa16.45■□□□□ 0.22
DDX41-212ENST00000511040 CNNM2Q9H8M5 875 aa16.45■□□□□ 0.22
DDX41-212ENST00000511040 ANO2Q9NQ90 1003 aa16.45■□□□□ 0.22
DDX41-212ENST00000511040 CTDP1Q9Y5B0 961 aaPredicted RBP16.45■□□□□ 0.22
DDX41-212ENST00000511040 IVNS1ABPQ9Y6Y0 642 aa16.45■□□□□ 0.22
DDX41-212ENST00000511040 FRMPD2Q68DX3 1309 aaPredicted RBP16.45■□□□□ 0.22
DDX41-212ENST00000511040 SLC15A5A6NIM6 579 aa16.44■□□□□ 0.22
DDX41-212ENST00000511040 CCL5P13501 91 aa16.44■□□□□ 0.22
DDX41-212ENST00000511040 STAT3P40763 770 aa16.44■□□□□ 0.22
DDX41-212ENST00000511040 RGS2P41220 211 aa16.44■□□□□ 0.22
DDX41-212ENST00000511040 SNAP25P60880 206 aa16.44■□□□□ 0.22
DDX41-212ENST00000511040 TRIM32Q13049 653 aa16.44■□□□□ 0.22
DDX41-212ENST00000511040 CCL14Q16627 93 aa16.44■□□□□ 0.22
DDX41-212ENST00000511040 TTBK2Q6IQ55 1244 aa16.44■□□□□ 0.22
DDX41-212ENST00000511040 STOX1Q6ZVD7 989 aa16.44■□□□□ 0.22
DDX41-212ENST00000511040 CYB5R4Q7L1T6 521 aa16.44■□□□□ 0.22
DDX41-212ENST00000511040 IQCA1Q86XH1 822 aa16.44■□□□□ 0.22
DDX41-212ENST00000511040 SHCBP1Q8NEM2 672 aa16.44■□□□□ 0.22
DDX41-212ENST00000511040 PXYLP1Q8TE99 480 aa16.44■□□□□ 0.22
DDX41-212ENST00000511040 DCAF4Q8WV16 495 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms