RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 ADORA2AP29274 412 aa12.48□□□□□ -0.41
CPSF4-212ENST00000482251 CYP2C19P33261 490 aa12.48□□□□□ -0.41
CPSF4-212ENST00000482251 IRX6P78412 446 aaPredicted RBP12.48□□□□□ -0.41
CPSF4-212ENST00000482251 CTDSPL2Q05D32 466 aa12.48□□□□□ -0.41
CPSF4-212ENST00000482251 PPARAQ07869 468 aa12.48□□□□□ -0.41
CPSF4-212ENST00000482251 TMEM132BQ14DG7 1078 aa12.48□□□□□ -0.41
CPSF4-212ENST00000482251 ZNF444Q8N0Y2 327 aaPredicted RBP12.48□□□□□ -0.41
CPSF4-212ENST00000482251 CEP95Q96GE4 821 aa12.48□□□□□ -0.41
CPSF4-212ENST00000482251 FAM227BQ96M60 508 aa12.48□□□□□ -0.41
CPSF4-212ENST00000482251 CLIP2Q9UDT6 1046 aa12.48□□□□□ -0.41
CPSF4-212ENST00000482251 STAP2Q9UGK3 403 aa12.48□□□□□ -0.41
CPSF4-212ENST00000482251 ISY1Q9ULR0 285 aaKnown RBP12.48□□□□□ -0.41
CPSF4-212ENST00000482251 IGKV6D-41A0A0C4DH26 115 aa12.47□□□□□ -0.41
CPSF4-212ENST00000482251 NDUFB10O96000 172 aa12.47□□□□□ -0.41
CPSF4-212ENST00000482251 TSPY3P0CV98 308 aa12.47□□□□□ -0.41
CPSF4-212ENST00000482251 TSPY8P0CW00 308 aa12.47□□□□□ -0.41
CPSF4-212ENST00000482251 MFSD14CQ5VZR4 134 aa12.47□□□□□ -0.41
CPSF4-212ENST00000482251 CHRDL2Q6WN34 429 aa12.47□□□□□ -0.41
CPSF4-212ENST00000482251 DPP9Q86TI2 863 aa12.47□□□□□ -0.41
CPSF4-212ENST00000482251 TRMT44Q8IYL2 757 aaKnown RBP12.47□□□□□ -0.41
CPSF4-212ENST00000482251 MB21D1Q8N884 522 aa12.47□□□□□ -0.41
CPSF4-212ENST00000482251 RILPL2Q969X0 211 aa12.47□□□□□ -0.41
CPSF4-212ENST00000482251 RWDD1Q9H446 243 aaPredicted RBP12.47□□□□□ -0.41
CPSF4-212ENST00000482251 INCENPQ9NQS7 918 aa12.47□□□□□ -0.41
CPSF4-212ENST00000482251 PPP1R9AQ9ULJ8 1098 aa12.47□□□□□ -0.41
CPSF4-212ENST00000482251 COLQQ9Y215 455 aaPredicted RBP12.47□□□□□ -0.41
CPSF4-212ENST00000482251 SUPT16HQ9Y5B9 1047 aaKnown RBP12.47□□□□□ -0.41
CPSF4-212ENST00000482251 PLIN4Q96Q06 1357 aa12.46□□□□□ -0.41
CPSF4-212ENST00000482251 EVI5O60447 810 aa12.46□□□□□ -0.41
CPSF4-212ENST00000482251 COBLO75128 1261 aa12.46□□□□□ -0.41
CPSF4-212ENST00000482251 CNGA1P29973 690 aa12.46□□□□□ -0.41
CPSF4-212ENST00000482251 SLC4A3P48751 1232 aa12.46□□□□□ -0.41
CPSF4-212ENST00000482251 PDE4BQ07343 736 aa12.46□□□□□ -0.41
CPSF4-212ENST00000482251 NMIQ13287 307 aaPredicted RBP12.46□□□□□ -0.41
CPSF4-212ENST00000482251 HABP4Q5JVS0 413 aaKnown RBP12.46□□□□□ -0.41
CPSF4-212ENST00000482251 RASGRP2Q7LDG7 609 aa12.46□□□□□ -0.41
CPSF4-212ENST00000482251 NECAB2Q7Z6G3 386 aa12.46□□□□□ -0.41
CPSF4-212ENST00000482251 ZNF589Q86UQ0 364 aaPredicted RBP12.46□□□□□ -0.41
CPSF4-212ENST00000482251 CHD1LQ86WJ1 897 aa12.46□□□□□ -0.41
CPSF4-212ENST00000482251 SMC5Q8IY18 1101 aa12.46□□□□□ -0.41
CPSF4-212ENST00000482251 SHCBP1Q8NEM2 672 aa12.46□□□□□ -0.41
CPSF4-212ENST00000482251 ZNF287Q9HBT7 754 aa12.46□□□□□ -0.41
CPSF4-212ENST00000482251 NYAP2Q9P242 653 aa12.46□□□□□ -0.41
CPSF4-212ENST00000482251 CEP290O15078 2479 aa12.45□□□□□ -0.42
CPSF4-212ENST00000482251 F5H6K3 240 aa12.45□□□□□ -0.42
CPSF4-212ENST00000482251 VWA5AO00534 786 aa12.45□□□□□ -0.42
CPSF4-212ENST00000482251 NMT2O60551 498 aa12.45□□□□□ -0.42
CPSF4-212ENST00000482251 PGK2P07205 417 aa12.45□□□□□ -0.42
CPSF4-212ENST00000482251 SLC3A2P08195 630 aaKnown RBP12.45□□□□□ -0.42
CPSF4-212ENST00000482251 HOXC6P09630 235 aa12.45□□□□□ -0.42
CPSF4-212ENST00000482251 MNX1P50219 401 aaPredicted RBP12.45□□□□□ -0.42
CPSF4-212ENST00000482251 TFAP4Q01664 338 aa12.45□□□□□ -0.42
CPSF4-212ENST00000482251 KLRC3Q07444 240 aa12.45□□□□□ -0.42
CPSF4-212ENST00000482251 ANO1Q5XXA6 986 aa12.45□□□□□ -0.42
CPSF4-212ENST00000482251 C7orf61Q8IZ16 206 aa12.45□□□□□ -0.42
CPSF4-212ENST00000482251 TRPV1Q8NER1 839 aa12.45□□□□□ -0.42
CPSF4-212ENST00000482251 KIFC2Q96AC6 838 aa12.45□□□□□ -0.42
CPSF4-212ENST00000482251 SLF1Q9BQI6 1058 aa12.45□□□□□ -0.42
CPSF4-212ENST00000482251 C11orf49Q9H6J7 331 aa12.45□□□□□ -0.42
CPSF4-212ENST00000482251 TOMM22Q9NS69 142 aa12.45□□□□□ -0.42
CPSF4-212ENST00000482251 MTMR4Q9NYA4 1195 aa12.45□□□□□ -0.42
CPSF4-212ENST00000482251 OGDHLQ9ULD0 1010 aa12.45□□□□□ -0.42
CPSF4-212ENST00000482251 MTMR7Q9Y216 660 aa12.45□□□□□ -0.42
CPSF4-212ENST00000482251 TACC3Q9Y6A5 838 aa12.45□□□□□ -0.42
CPSF4-212ENST00000482251 PFASO15067 1338 aa12.44□□□□□ -0.42
CPSF4-212ENST00000482251 TSPY2A6NKD2 308 aa12.44□□□□□ -0.42
CPSF4-212ENST00000482251 TTLL1O95922 423 aa12.44□□□□□ -0.42
CPSF4-212ENST00000482251 NUCB1Q02818 461 aa12.44□□□□□ -0.42
CPSF4-212ENST00000482251 AAMPQ13685 434 aa12.44□□□□□ -0.42
CPSF4-212ENST00000482251 LHX8Q68G74 356 aa12.44□□□□□ -0.42
CPSF4-212ENST00000482251 SNRNP48Q6IEG0 339 aaKnown RBP12.44□□□□□ -0.42
CPSF4-212ENST00000482251 ANKLE1Q8NAG6 615 aa12.44□□□□□ -0.42
CPSF4-212ENST00000482251 REPS2Q8NFH8 660 aa12.44□□□□□ -0.42
CPSF4-212ENST00000482251 MMP19Q99542 508 aa12.44□□□□□ -0.42
CPSF4-212ENST00000482251 NBPF3Q9H094 633 aa12.44□□□□□ -0.42
CPSF4-212ENST00000482251 MROH8Q9H579 483 aa12.44□□□□□ -0.42
CPSF4-212ENST00000482251 HELLSQ9NRZ9 838 aa12.44□□□□□ -0.42
CPSF4-212ENST00000482251 ZNF214Q9UL59 606 aaPredicted RBP12.44□□□□□ -0.42
CPSF4-212ENST00000482251 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.44□□□□□ -0.42
CPSF4-212ENST00000482251 PLXNA1Q9UIW2 1896 aa12.43□□□□□ -0.42
CPSF4-212ENST00000482251 STRNO43815 780 aa12.43□□□□□ -0.42
CPSF4-212ENST00000482251 RANBP6O60518 1105 aaKnown RBP12.43□□□□□ -0.42
CPSF4-212ENST00000482251 MYCNP04198 464 aaPredicted RBP12.43□□□□□ -0.42
CPSF4-212ENST00000482251 FCER1AP12319 257 aa12.43□□□□□ -0.42
CPSF4-212ENST00000482251 CYBAP13498 195 aa12.43□□□□□ -0.42
CPSF4-212ENST00000482251 STAT3P40763 770 aa12.43□□□□□ -0.42
CPSF4-212ENST00000482251 HAND2P61296 217 aa12.43□□□□□ -0.42
CPSF4-212ENST00000482251 MCMDC2Q4G0Z9 681 aa12.43□□□□□ -0.42
CPSF4-212ENST00000482251 RRP12Q5JTH9 1297 aaKnown RBP12.43□□□□□ -0.42
CPSF4-212ENST00000482251 PRAMEF19Q5SWL8 479 aa12.43□□□□□ -0.42
CPSF4-212ENST00000482251 RIOX2Q8IUF8 465 aa12.43□□□□□ -0.42
CPSF4-212ENST00000482251 PLEKHM2Q8IWE5 1019 aa12.43□□□□□ -0.42
CPSF4-212ENST00000482251 CPXCR1Q8N123 301 aa12.43□□□□□ -0.42
CPSF4-212ENST00000482251 NEDD1Q8NHV4 660 aa12.43□□□□□ -0.42
CPSF4-212ENST00000482251 DDX20Q9UHI6 824 aaKnown RBP12.43□□□□□ -0.42
CPSF4-212ENST00000482251 ZMYND8Q9ULU4 1186 aaPredicted RBP12.43□□□□□ -0.42
CPSF4-212ENST00000482251 ADAMTS5Q9UNA0 930 aa12.43□□□□□ -0.42
CPSF4-212ENST00000482251 STX8Q9UNK0 236 aa12.43□□□□□ -0.42
CPSF4-212ENST00000482251 CTDP1Q9Y5B0 961 aaPredicted RBP12.43□□□□□ -0.42
CPSF4-212ENST00000482251 NR2E3Q9Y5X4 410 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms