RNA–Protein interactions for RNA: ENST00000472577.1

PKD1-208, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 2

Gene PKD1, Length 1,140 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-208ENST00000472577 SMCR8Q8TEV9 937 aaPredicted RBP20.29■□□□□ 0.84
PKD1-208ENST00000472577 MKL1Q969V6 931 aa20.29■□□□□ 0.84
PKD1-208ENST00000472577 KRT23Q9C075 422 aa20.29■□□□□ 0.84
PKD1-208ENST00000472577 VCPKMTQ9H867 229 aa20.29■□□□□ 0.84
PKD1-208ENST00000472577 CNNM2Q9H8M5 875 aa20.29■□□□□ 0.84
PKD1-208ENST00000472577 TCP11L1Q9NUJ3 509 aa20.29■□□□□ 0.84
PKD1-208ENST00000472577 ZSWIM5Q9P217 1185 aa20.29■□□□□ 0.84
PKD1-208ENST00000472577 TNPO2O14787 897 aaKnown RBP20.28■□□□□ 0.84
PKD1-208ENST00000472577 LRRC47Q8N1G4 583 aaKnown RBP20.28■□□□□ 0.84
PKD1-208ENST00000472577 ZKSCAN3Q9BRR0 538 aa20.28■□□□□ 0.84
PKD1-208ENST00000472577 PRO3102Q9H379 93 aa20.28■□□□□ 0.84
PKD1-208ENST00000472577 HOXA7P31268 230 aaPredicted RBP20.27■□□□□ 0.84
PKD1-208ENST00000472577 NT5C2P49902 561 aa20.27■□□□□ 0.84
PKD1-208ENST00000472577 CYB5R4Q7L1T6 521 aa20.27■□□□□ 0.84
PKD1-208ENST00000472577 SPICE1Q8N0Z3 855 aa20.27■□□□□ 0.84
PKD1-208ENST00000472577 ANKRD13CQ8N6S4 541 aa20.27■□□□□ 0.84
PKD1-208ENST00000472577 STX8Q9UNK0 236 aa20.27■□□□□ 0.84
PKD1-208ENST00000472577 ALPK3Q96L96 1907 aa20.27■□□□□ 0.84
PKD1-208ENST00000472577 DOCK3Q8IZD9 2030 aa20.26■□□□□ 0.83
PKD1-208ENST00000472577 SGPL1O95470 568 aa20.26■□□□□ 0.83
PKD1-208ENST00000472577 TRDNQ13061 729 aa20.26■□□□□ 0.83
PKD1-208ENST00000472577 PABPC4Q13310 644 aaKnown RBP eCLIP20.26■□□□□ 0.833e-9■■■■■ 39.9
PKD1-208ENST00000472577 RCSD1Q6JBY9 416 aa20.26■□□□□ 0.83
PKD1-208ENST00000472577 RASEFQ8IZ41 740 aa20.26■□□□□ 0.83
PKD1-208ENST00000472577 NCOA7Q8NI08 942 aa20.26■□□□□ 0.83
PKD1-208ENST00000472577 LPAR1Q92633 364 aa20.26■□□□□ 0.83
PKD1-208ENST00000472577 HTATIP2Q9BUP3 242 aa20.26■□□□□ 0.83
PKD1-208ENST00000472577 ASCC2Q9H1I8 757 aaPredicted RBP20.26■□□□□ 0.83
PKD1-208ENST00000472577 RPAP3Q9H6T3 665 aaPredicted RBP20.26■□□□□ 0.83
PKD1-208ENST00000472577 GOPCQ9HD26 462 aa20.26■□□□□ 0.83
PKD1-208ENST00000472577 F5H6K3 240 aa20.25■□□□□ 0.83
PKD1-208ENST00000472577 NDUFB10O96000 172 aa20.25■□□□□ 0.83
PKD1-208ENST00000472577 KLRC3Q07444 240 aa20.25■□□□□ 0.83
PKD1-208ENST00000472577 IRF5Q13568 498 aa20.25■□□□□ 0.83
PKD1-208ENST00000472577 COL9A3Q14050 684 aaPredicted RBP20.25■□□□□ 0.83
PKD1-208ENST00000472577 PPP4R3BQ5MIZ7 849 aa20.25■□□□□ 0.83
PKD1-208ENST00000472577 RNF20Q5VTR2 975 aa20.25■□□□□ 0.83
PKD1-208ENST00000472577 RALYLQ86SE5 291 aaKnown RBP20.25■□□□□ 0.83
PKD1-208ENST00000472577 PXYLP1Q8TE99 480 aa20.25■□□□□ 0.83
PKD1-208ENST00000472577 DEFB118Q96PH6 123 aa20.25■□□□□ 0.83
PKD1-208ENST00000472577 PNMA3Q9UL41 463 aa20.25■□□□□ 0.83
PKD1-208ENST00000472577 SYNPO2Q9UMS6 1093 aa20.25■□□□□ 0.83
PKD1-208ENST00000472577 USP17L15C9J2P7 530 aa20.24■□□□□ 0.83
PKD1-208ENST00000472577 USP17L13C9JLJ4 530 aa20.24■□□□□ 0.83
PKD1-208ENST00000472577 USP17L11C9JVI0 530 aa20.24■□□□□ 0.83
PKD1-208ENST00000472577 USP17L18D6R9N7 530 aa20.24■□□□□ 0.83
PKD1-208ENST00000472577 USP17L22D6RA61 530 aa20.24■□□□□ 0.83
PKD1-208ENST00000472577 USP17L17D6RBQ6 530 aa20.24■□□□□ 0.83
PKD1-208ENST00000472577 USP17L19D6RCP7 530 aa20.24■□□□□ 0.83
PKD1-208ENST00000472577 USP17L20D6RJB6 530 aa20.24■□□□□ 0.83
PKD1-208ENST00000472577 RAD21O60216 631 aa20.24■□□□□ 0.83
PKD1-208ENST00000472577 HSPA4P34932 840 aa20.24■□□□□ 0.83
PKD1-208ENST00000472577 USP17L24Q0WX57 530 aa20.24■□□□□ 0.83
PKD1-208ENST00000472577 CATSPERGQ6ZRH7 1159 aa20.24■□□□□ 0.83
PKD1-208ENST00000472577 IQCA1Q86XH1 822 aa20.24■□□□□ 0.83
PKD1-208ENST00000472577 MB21D2Q8IYB1 491 aaPredicted RBP20.24■□□□□ 0.83
PKD1-208ENST00000472577 KCNB2Q92953 911 aa20.24■□□□□ 0.83
PKD1-208ENST00000472577 ZSCAN10Q96SZ4 725 aaPredicted RBP20.24■□□□□ 0.83
PKD1-208ENST00000472577 TMEM47Q9BQJ4 181 aa20.24■□□□□ 0.83
PKD1-208ENST00000472577 USP26Q9BXU7 913 aa20.24■□□□□ 0.83
PKD1-208ENST00000472577 PAK6Q9NQU5 681 aaPredicted RBP20.24■□□□□ 0.83
PKD1-208ENST00000472577 WDR46O15213 610 aaKnown RBP20.23■□□□□ 0.83
PKD1-208ENST00000472577 EPB41L2O43491 1005 aaKnown RBP20.23■□□□□ 0.83
PKD1-208ENST00000472577 ANTXR2P58335 489 aa20.23■□□□□ 0.83
PKD1-208ENST00000472577 IRX3P78415 501 aaPredicted RBP20.23■□□□□ 0.83
PKD1-208ENST00000472577 FAM110CQ1W6H9 321 aa20.23■□□□□ 0.83
PKD1-208ENST00000472577 TSGA10IPQ3SY00 556 aa20.23■□□□□ 0.83
PKD1-208ENST00000472577 GMCL1P1Q8NEA9 526 aa20.23■□□□□ 0.83
PKD1-208ENST00000472577 TTC14Q96N46 770 aa20.23■□□□□ 0.83
PKD1-208ENST00000472577 NUP88Q99567 741 aaPredicted RBP20.23■□□□□ 0.83
PKD1-208ENST00000472577 P2RX7Q99572 595 aaKnown RBP20.23■□□□□ 0.83
PKD1-208ENST00000472577 TNKSO95271 1327 aa20.23■□□□□ 0.83
PKD1-208ENST00000472577 PLXNB2O15031 1838 aa20.23■□□□□ 0.83
PKD1-208ENST00000472577 TOP1P11387 765 aaKnown RBP20.22■□□□□ 0.83
PKD1-208ENST00000472577 C8orf34Q49A92 452 aa20.22■□□□□ 0.83
PKD1-208ENST00000472577 FAM83BQ5T0W9 1011 aa20.22■□□□□ 0.83
PKD1-208ENST00000472577 SLFN13Q68D06 897 aa20.22■□□□□ 0.83
PKD1-208ENST00000472577 RASGRP2Q7LDG7 609 aa20.22■□□□□ 0.83
PKD1-208ENST00000472577 CHST3Q7LGC8 479 aa20.22■□□□□ 0.83
PKD1-208ENST00000472577 DGKHQ86XP1 1220 aa20.22■□□□□ 0.83
PKD1-208ENST00000472577 ENAHQ8N8S7 591 aaPredicted RBP20.22■□□□□ 0.83
PKD1-208ENST00000472577 DIS3LQ8TF46 1054 aaKnown RBP20.22■□□□□ 0.83
PKD1-208ENST00000472577 ANKS1AQ92625 1134 aa20.22■□□□□ 0.83
PKD1-208ENST00000472577 UBAC1Q9BSL1 405 aa20.22■□□□□ 0.83
PKD1-208ENST00000472577 TANGO6Q9C0B7 1094 aa20.22■□□□□ 0.83
PKD1-208ENST00000472577 RLFQ13129 1914 aa20.21■□□□□ 0.83
PKD1-208ENST00000472577 SEC24BO95487 1268 aa20.21■□□□□ 0.83
PKD1-208ENST00000472577 HERVK_113P62684 666 aa20.21■□□□□ 0.83
PKD1-208ENST00000472577 SEC23AQ15436 765 aa20.21■□□□□ 0.83
PKD1-208ENST00000472577 ADCK5Q3MIX3 580 aa20.21■□□□□ 0.83
PKD1-208ENST00000472577 CCDC178Q5BJE1 867 aa20.21■□□□□ 0.83
PKD1-208ENST00000472577 POTEEQ6S8J3 1075 aa20.21■□□□□ 0.83
PKD1-208ENST00000472577 CHMP4CQ96CF2 233 aa20.21■□□□□ 0.83
PKD1-208ENST00000472577 CRISPLD2Q9H0B8 497 aa20.21■□□□□ 0.83
PKD1-208ENST00000472577 SNX14Q9Y5W7 946 aa20.21■□□□□ 0.83
PKD1-208ENST00000472577 PARP14Q460N5 1801 aa20.2■□□□□ 0.82
PKD1-208ENST00000472577 TFRCP02786 760 aaKnown RBP20.2■□□□□ 0.82
PKD1-208ENST00000472577 ZKSCAN1P17029 563 aaPredicted RBP20.2■□□□□ 0.82
PKD1-208ENST00000472577 TRIM32Q13049 653 aa20.2■□□□□ 0.82
PKD1-208ENST00000472577 COA7Q96BR5 231 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms