RNA–Protein interactions for RNA: ENST00000432057.2

VRK2-205, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best)

Gene VRK2, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-205ENST00000432057 FAM198AQ9UFP1 575 aa22.4■■□□□ 1.18
VRK2-205ENST00000432057 SERPINA10Q9UK55 444 aa22.4■■□□□ 1.18
VRK2-205ENST00000432057 MORC2Q9Y6X9 1032 aaPredicted RBP22.4■■□□□ 1.18
VRK2-205ENST00000432057 DPEP1P16444 411 aa22.39■■□□□ 1.18
VRK2-205ENST00000432057 LONRF3Q496Y0 759 aa22.39■■□□□ 1.18
VRK2-205ENST00000432057 CEP57L1Q8IYX8 460 aa22.39■■□□□ 1.18
VRK2-205ENST00000432057 ZNF579Q8NAF0 562 aaKnown RBP22.39■■□□□ 1.18
VRK2-205ENST00000432057 CSRNP2Q9H175 543 aa22.39■■□□□ 1.18
VRK2-205ENST00000432057 EHD4Q9H223 541 aa22.39■■□□□ 1.18
VRK2-205ENST00000432057 FAM13BQ9NYF5 915 aa22.39■■□□□ 1.18
VRK2-205ENST00000432057 PCDHA4Q9UN74 947 aa22.39■■□□□ 1.18
VRK2-205ENST00000432057 BIN1O00499 593 aa22.39■■□□□ 1.17
VRK2-205ENST00000432057 KRBA2Q6ZNG9 492 aa22.39■■□□□ 1.17
VRK2-205ENST00000432057 CCDC148Q8NFR7 591 aa22.39■■□□□ 1.17
VRK2-205ENST00000432057 SLC16A10Q8TF71 515 aa22.39■■□□□ 1.17
VRK2-205ENST00000432057 DNAJC18Q9H819 358 aa22.39■■□□□ 1.17
VRK2-205ENST00000432057 BARHL2Q9NY43 387 aa22.39■■□□□ 1.17
VRK2-205ENST00000432057 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.39■■□□□ 1.17
VRK2-205ENST00000432057 PDHBP11177 359 aa22.38■■□□□ 1.17
VRK2-205ENST00000432057 PNOCQ13519 176 aa22.38■■□□□ 1.17
VRK2-205ENST00000432057 DPCR1Q3MIW9 517 aa22.38■■□□□ 1.17
VRK2-205ENST00000432057 METTL16Q86W50 562 aaKnown RBP22.38■■□□□ 1.17
VRK2-205ENST00000432057 RASGRP4Q8TDF6 673 aa22.38■■□□□ 1.17
VRK2-205ENST00000432057 IDI2Q9BXS1 227 aa22.38■■□□□ 1.17
VRK2-205ENST00000432057 FRMPD2Q68DX3 1309 aaPredicted RBP22.38■■□□□ 1.17
VRK2-205ENST00000432057 BRCA1P38398 1863 aaKnown RBP22.38■■□□□ 1.17
VRK2-205ENST00000432057 DDTLA6NHG4 134 aaPredicted RBP22.37■■□□□ 1.17
VRK2-205ENST00000432057 FAM196BA6NMK8 535 aa22.37■■□□□ 1.17
VRK2-205ENST00000432057 BMP15O95972 392 aa22.37■■□□□ 1.17
VRK2-205ENST00000432057 KCNA3P22001 575 aa22.37■■□□□ 1.17
VRK2-205ENST00000432057 ZRSR1Q15695 479 aaKnown RBP22.37■■□□□ 1.17
VRK2-205ENST00000432057 HOMER1Q86YM7 354 aa22.37■■□□□ 1.17
VRK2-205ENST00000432057 DHX40Q8IX18 779 aaKnown RBP22.37■■□□□ 1.17
VRK2-205ENST00000432057 CNNM3Q8NE01 707 aa22.37■■□□□ 1.17
VRK2-205ENST00000432057 CLIP2Q9UDT6 1046 aa22.37■■□□□ 1.17
VRK2-205ENST00000432057 GOLGB1Q14789 3259 aaKnown RBP22.37■■□□□ 1.17
VRK2-205ENST00000432057 MPHOSPH10O00566 681 aaKnown RBP22.37■■□□□ 1.17
VRK2-205ENST00000432057 TTLL1O95922 423 aa22.37■■□□□ 1.17
VRK2-205ENST00000432057 CLCN1P35523 988 aa22.37■■□□□ 1.17
VRK2-205ENST00000432057 NLRP12P59046 1061 aa22.37■■□□□ 1.17
VRK2-205ENST00000432057 USP49Q70CQ1 688 aa22.37■■□□□ 1.17
VRK2-205ENST00000432057 SH3BP5LQ7L8J4 393 aa22.37■■□□□ 1.17
VRK2-205ENST00000432057 GOLGA6L19H0YKK7 550 aa22.36■■□□□ 1.17
VRK2-205ENST00000432057 M0R2N6 131 aa22.36■■□□□ 1.17
VRK2-205ENST00000432057 MSNP26038 577 aaKnown RBP22.36■■□□□ 1.17
VRK2-205ENST00000432057 TRAPPC10P48553 1259 aa22.36■■□□□ 1.17
VRK2-205ENST00000432057 CFAP100Q494V2 611 aa22.36■■□□□ 1.17
VRK2-205ENST00000432057 AOPEPQ8N6M6 819 aa22.36■■□□□ 1.17
VRK2-205ENST00000432057 DAGLBQ8NCG7 672 aa22.36■■□□□ 1.17
VRK2-205ENST00000432057 RRP36Q96EU6 259 aaKnown RBP22.36■■□□□ 1.17
VRK2-205ENST00000432057 UBA5Q9GZZ9 404 aa22.36■■□□□ 1.17
VRK2-205ENST00000432057 ZKSCAN5Q9Y2L8 839 aa22.36■■□□□ 1.17
VRK2-205ENST00000432057 POLR2DO15514 142 aaKnown RBP22.35■■□□□ 1.17
VRK2-205ENST00000432057 ATP2C1P98194 919 aaPredicted RBP22.35■■□□□ 1.17
VRK2-205ENST00000432057 PTGDRQ13258 359 aa22.35■■□□□ 1.17
VRK2-205ENST00000432057 ZSCAN29Q8IWY8 852 aaPredicted RBP22.35■■□□□ 1.17
VRK2-205ENST00000432057 RTKN2Q8IZC4 609 aa22.35■■□□□ 1.17
VRK2-205ENST00000432057 PIGSQ96S52 555 aa22.35■■□□□ 1.17
VRK2-205ENST00000432057 DHX36Q9H2U1 1008 aaKnown RBP22.35■■□□□ 1.17
VRK2-205ENST00000432057 TDRD3Q9H7E2 651 aaKnown RBP22.35■■□□□ 1.17
VRK2-205ENST00000432057 VAT1LQ9HCJ6 419 aa22.35■■□□□ 1.17
VRK2-205ENST00000432057 TUBE1Q9UJT0 475 aa22.35■■□□□ 1.17
VRK2-205ENST00000432057 FOXN1O15353 648 aa22.34■■□□□ 1.17
VRK2-205ENST00000432057 GRIPAP1Q4V328 841 aa22.34■■□□□ 1.17
VRK2-205ENST00000432057 ASPRV1Q53RT3 343 aa22.34■■□□□ 1.17
VRK2-205ENST00000432057 FERMT2Q96AC1 680 aa22.34■■□□□ 1.17
VRK2-205ENST00000432057 PSMD1Q99460 953 aa22.34■■□□□ 1.17
VRK2-205ENST00000432057 NAT10Q9H0A0 1025 aaKnown RBP22.34■■□□□ 1.17
VRK2-205ENST00000432057 ZNF277Q9NRM2 450 aaPredicted RBP22.34■■□□□ 1.17
VRK2-205ENST00000432057 SERTAD1Q9UHV2 236 aa22.34■■□□□ 1.17
VRK2-205ENST00000432057 PCDHA6Q9UN73 950 aa22.34■■□□□ 1.17
VRK2-205ENST00000432057 PCDHA8Q9Y5H6 950 aa22.34■■□□□ 1.17
VRK2-205ENST00000432057 BECN2A8MW95 431 aa22.34■■□□□ 1.17
VRK2-205ENST00000432057 SNHG28P0DPA3 235 aa22.34■■□□□ 1.17
VRK2-205ENST00000432057 SMARCA1P28370 1054 aa22.34■■□□□ 1.17
VRK2-205ENST00000432057 MCM7P33993 719 aa22.34■■□□□ 1.17
VRK2-205ENST00000432057 NAPAP54920 295 aa22.34■■□□□ 1.17
VRK2-205ENST00000432057 ISM2Q6H9L7 571 aa22.34■■□□□ 1.17
VRK2-205ENST00000432057 PDILTQ8N807 584 aa22.34■■□□□ 1.17
VRK2-205ENST00000432057 SEC63Q9UGP8 760 aaKnown RBP22.34■■□□□ 1.17
VRK2-205ENST00000432057 FER1L6Q2WGJ9 1857 aa22.33■■□□□ 1.17
VRK2-205ENST00000432057 ZNF75DP51815 510 aa22.33■■□□□ 1.17
VRK2-205ENST00000432057 ATP2B2Q01814 1243 aa22.33■■□□□ 1.17
VRK2-205ENST00000432057 SHROOM1Q2M3G4 852 aaPredicted RBP22.33■■□□□ 1.17
VRK2-205ENST00000432057 GALNT17Q6IS24 598 aa22.33■■□□□ 1.17
VRK2-205ENST00000432057 LARGE2Q8N3Y3 721 aa22.33■■□□□ 1.17
VRK2-205ENST00000432057 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.33■■□□□ 1.17
VRK2-205ENST00000432057 CCDC194A0A1B0GVG4 234 aa22.32■■□□□ 1.16
VRK2-205ENST00000432057 NPM3O75607 178 aaKnown RBP22.32■■□□□ 1.16
VRK2-205ENST00000432057 PLA2G4DQ86XP0 818 aa22.32■■□□□ 1.16
VRK2-205ENST00000432057 SPC24Q8NBT2 197 aa22.32■■□□□ 1.16
VRK2-205ENST00000432057 EPSTI1Q96J88 318 aa22.32■■□□□ 1.16
VRK2-205ENST00000432057 PRMT6Q96LA8 375 aaPredicted RBP22.32■■□□□ 1.16
VRK2-205ENST00000432057 TRIM5Q9C035 493 aa22.32■■□□□ 1.16
VRK2-205ENST00000432057 RIOX1Q9H6W3 641 aa22.32■■□□□ 1.16
VRK2-205ENST00000432057 GPCPD1Q9NPB8 672 aa22.32■■□□□ 1.16
VRK2-205ENST00000432057 PI4KBQ9UBF8 816 aa22.32■■□□□ 1.16
VRK2-205ENST00000432057 VWA3AA6NCI4 1184 aa22.32■■□□□ 1.16
VRK2-205ENST00000432057 ACTN4O43707 911 aaKnown RBP22.32■■□□□ 1.16
VRK2-205ENST00000432057 RAD17O75943 681 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms