RNA–Protein interactions for RNA: ENST00000380749.9

HMGN1-204, Transcript of high mobility group nucleosome binding domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN1, Length 1,383 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-204ENST00000380749 TTC41PQ6P2S7 1318 aa20.63■□□□□ 0.89
HMGN1-204ENST00000380749 COL6A3P12111 3177 aa20.63■□□□□ 0.89
HMGN1-204ENST00000380749 GSG1L2A8MUP6 293 aa20.62■□□□□ 0.89
HMGN1-204ENST00000380749 ERC2O15083 957 aa20.62■□□□□ 0.89
HMGN1-204ENST00000380749 GPAA1O43292 621 aa20.62■□□□□ 0.89
HMGN1-204ENST00000380749 SLC25A27O95847 323 aa20.62■□□□□ 0.89
HMGN1-204ENST00000380749 CYBAP13498 195 aa20.62■□□□□ 0.89
HMGN1-204ENST00000380749 TDO2P48775 406 aa20.62■□□□□ 0.89
HMGN1-204ENST00000380749 OSBP2Q969R2 916 aa20.62■□□□□ 0.89
HMGN1-204ENST00000380749 GDF15Q99988 308 aa20.62■□□□□ 0.89
HMGN1-204ENST00000380749 MINDY4BA8MYZ0 360 aa20.61■□□□□ 0.89
HMGN1-204ENST00000380749 FCER1AP12319 257 aa20.61■□□□□ 0.89
HMGN1-204ENST00000380749 SYN1P17600 705 aa20.61■□□□□ 0.89
HMGN1-204ENST00000380749 ZNF287Q9HBT7 754 aa20.61■□□□□ 0.89
HMGN1-204ENST00000380749 LTBP2Q14767 1821 aa20.61■□□□□ 0.89
HMGN1-204ENST00000380749 DNM1LO00429 736 aa20.6■□□□□ 0.89
HMGN1-204ENST00000380749 RASA1P20936 1047 aa20.6■□□□□ 0.89
HMGN1-204ENST00000380749 BMP8BP34820 402 aa20.6■□□□□ 0.89
HMGN1-204ENST00000380749 COPB2P35606 906 aa20.6■□□□□ 0.89
HMGN1-204ENST00000380749 TMEM132BQ14DG7 1078 aa20.6■□□□□ 0.89
HMGN1-204ENST00000380749 FAM83BQ5T0W9 1011 aa20.6■□□□□ 0.89
HMGN1-204ENST00000380749 PPP1R9AQ9ULJ8 1098 aa20.6■□□□□ 0.89
HMGN1-204ENST00000380749 IGHA2P01877 340 aa20.59■□□□□ 0.89
HMGN1-204ENST00000380749 APPP05067 770 aa20.59■□□□□ 0.89
HMGN1-204ENST00000380749 LRRC26Q2I0M4 334 aa20.59■□□□□ 0.89
HMGN1-204ENST00000380749 STK11IPQ8N1F8 1099 aa20.59■□□□□ 0.89
HMGN1-204ENST00000380749 TRPV1Q8NER1 839 aa20.59■□□□□ 0.89
HMGN1-204ENST00000380749 EPB41L4AQ9HCS5 686 aaPredicted RBP20.59■□□□□ 0.89
HMGN1-204ENST00000380749 FBXO28Q9NVF7 368 aa20.59■□□□□ 0.89
HMGN1-204ENST00000380749 COBLO75128 1261 aa20.59■□□□□ 0.89
HMGN1-204ENST00000380749 MAGEA10P43363 369 aaPredicted RBP20.59■□□□□ 0.89
HMGN1-204ENST00000380749 RIOX2Q8IUF8 465 aa20.59■□□□□ 0.89
HMGN1-204ENST00000380749 MAML3Q96JK9 1138 aa20.59■□□□□ 0.89
HMGN1-204ENST00000380749 MMP19Q99542 508 aa20.59■□□□□ 0.89
HMGN1-204ENST00000380749 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.59■□□□□ 0.89
HMGN1-204ENST00000380749 NACAP1Q9BZK3 213 aa20.59■□□□□ 0.89
HMGN1-204ENST00000380749 SENP6Q9GZR1 1112 aaPredicted RBP20.59■□□□□ 0.89
HMGN1-204ENST00000380749 ADAMTS5Q9UNA0 930 aa20.59■□□□□ 0.89
HMGN1-204ENST00000380749 M0R2C6 588 aa20.58■□□□□ 0.88
HMGN1-204ENST00000380749 VWA5AO00534 786 aa20.58■□□□□ 0.88
HMGN1-204ENST00000380749 SEPT4O43236 478 aa20.58■□□□□ 0.88
HMGN1-204ENST00000380749 KCTD2Q14681 263 aa20.58■□□□□ 0.88
HMGN1-204ENST00000380749 ARRDC4Q8NCT1 418 aa20.58■□□□□ 0.88
HMGN1-204ENST00000380749 FSD1Q9BTV5 496 aa20.58■□□□□ 0.88
HMGN1-204ENST00000380749 NYAP2Q9P242 653 aa20.58■□□□□ 0.88
HMGN1-204ENST00000380749 PCDHB15Q9Y5E8 787 aa20.58■□□□□ 0.88
HMGN1-204ENST00000380749 STAT3P40763 770 aa20.57■□□□□ 0.88
HMGN1-204ENST00000380749 PI4K2BQ8TCG2 481 aa20.57■□□□□ 0.88
HMGN1-204ENST00000380749 SLF1Q9BQI6 1058 aa20.57■□□□□ 0.88
HMGN1-204ENST00000380749 ZBTB47Q9UFB7 747 aaPredicted RBP20.57■□□□□ 0.88
HMGN1-204ENST00000380749 ZNF214Q9UL59 606 aaPredicted RBP20.57■□□□□ 0.88
HMGN1-204ENST00000380749 KBTBD13C9JR72 458 aa20.56■□□□□ 0.88
HMGN1-204ENST00000380749 MX1P20591 662 aa20.56■□□□□ 0.88
HMGN1-204ENST00000380749 RRP1P56182 461 aaKnown RBP20.56■□□□□ 0.88
HMGN1-204ENST00000380749 TDHQ8IZJ6 230 aa20.56■□□□□ 0.88
HMGN1-204ENST00000380749 ZNF444Q8N0Y2 327 aaPredicted RBP20.56■□□□□ 0.88
HMGN1-204ENST00000380749 UBE2OQ9C0C9 1292 aaKnown RBP20.56■□□□□ 0.88
HMGN1-204ENST00000380749 PLIN4Q96Q06 1357 aa20.55■□□□□ 0.88
HMGN1-204ENST00000380749 SOX1O00570 391 aaPredicted RBP20.55■□□□□ 0.88
HMGN1-204ENST00000380749 NDUFB10O96000 172 aa20.55■□□□□ 0.88
HMGN1-204ENST00000380749 SLC3A2P08195 630 aaKnown RBP20.55■□□□□ 0.88
HMGN1-204ENST00000380749 IFNL3Q8IZI9 196 aa20.55■□□□□ 0.88
HMGN1-204ENST00000380749 NUP88Q99567 741 aaPredicted RBP20.55■□□□□ 0.88
HMGN1-204ENST00000380749 TEX13BQ9BXU2 312 aa20.55■□□□□ 0.88
HMGN1-204ENST00000380749 NAPBQ9H115 298 aa20.55■□□□□ 0.88
HMGN1-204ENST00000380749 NRBP1Q9UHY1 535 aa20.55■□□□□ 0.88
HMGN1-204ENST00000380749 PATL2C9JE40 543 aaKnown RBP20.54■□□□□ 0.88
HMGN1-204ENST00000380749 F5H6K3 240 aa20.54■□□□□ 0.88
HMGN1-204ENST00000380749 PRDM1O75626 825 aa20.54■□□□□ 0.88
HMGN1-204ENST00000380749 ATN1P54259 1190 aaPredicted RBP20.54■□□□□ 0.88
HMGN1-204ENST00000380749 PDE4BQ07343 736 aa20.54■□□□□ 0.88
HMGN1-204ENST00000380749 KLRC3Q07444 240 aa20.54■□□□□ 0.88
HMGN1-204ENST00000380749 GJC2Q5T442 439 aaPredicted RBP20.54■□□□□ 0.88
HMGN1-204ENST00000380749 ANO1Q5XXA6 986 aa20.54■□□□□ 0.88
HMGN1-204ENST00000380749 REPS2Q8NFH8 660 aa20.54■□□□□ 0.88
HMGN1-204ENST00000380749 LRCH3Q96II8 777 aa20.54■□□□□ 0.88
HMGN1-204ENST00000380749 SYNPO2Q9UMS6 1093 aa20.54■□□□□ 0.88
HMGN1-204ENST00000380749 CTDP1Q9Y5B0 961 aaPredicted RBP20.54■□□□□ 0.88
HMGN1-204ENST00000380749 CUL9Q8IWT3 2517 aa20.53■□□□□ 0.88
HMGN1-204ENST00000380749 IGKV6D-41A0A0C4DH26 115 aa20.53■□□□□ 0.88
HMGN1-204ENST00000380749 MYCNP04198 464 aaPredicted RBP20.53■□□□□ 0.88
HMGN1-204ENST00000380749 PGK2P07205 417 aa20.53■□□□□ 0.88
HMGN1-204ENST00000380749 SNRNP48Q6IEG0 339 aaKnown RBP20.53■□□□□ 0.88
HMGN1-204ENST00000380749 OTUD7AQ8TE49 926 aaPredicted RBP20.53■□□□□ 0.88
HMGN1-204ENST00000380749 CEP95Q96GE4 821 aa20.53■□□□□ 0.88
HMGN1-204ENST00000380749 CLIP2Q9UDT6 1046 aa20.53■□□□□ 0.88
HMGN1-204ENST00000380749 PRKAG2Q9UGJ0 569 aa20.53■□□□□ 0.88
HMGN1-204ENST00000380749 DIS3Q9Y2L1 958 aaKnown RBP20.53■□□□□ 0.88
HMGN1-204ENST00000380749 TTLL1O95922 423 aa20.52■□□□□ 0.88
HMGN1-204ENST00000380749 TSPY3P0CV98 308 aa20.52■□□□□ 0.88
HMGN1-204ENST00000380749 TSPY8P0CW00 308 aa20.52■□□□□ 0.88
HMGN1-204ENST00000380749 RTP1P59025 263 aa20.52■□□□□ 0.88
HMGN1-204ENST00000380749 ZMYM1Q5SVZ6 1142 aa20.52■□□□□ 0.88
HMGN1-204ENST00000380749 PRAMEF19Q5SWL8 479 aa20.52■□□□□ 0.88
HMGN1-204ENST00000380749 PRPF38AQ8NAV1 312 aaKnown RBP20.52■□□□□ 0.88
HMGN1-204ENST00000380749 SEC62Q99442 399 aaKnown RBP20.52■□□□□ 0.88
HMGN1-204ENST00000380749 LBHD1Q9BQE6 289 aaPredicted RBP20.52■□□□□ 0.88
HMGN1-204ENST00000380749 TINF2Q9BSI4 451 aa20.52■□□□□ 0.88
HMGN1-204ENST00000380749 MTMR4Q9NYA4 1195 aa20.52■□□□□ 0.88
HMGN1-204ENST00000380749 MDM2Q00987 491 aaPredicted RBP20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms