RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 ADAMTS4O75173 837 aa21.1■□□□□ 0.97
HMGN1-203ENST00000380748 TIMP1P01033 207 aa21.1■□□□□ 0.97
HMGN1-203ENST00000380748 POLR3DP05423 398 aaPredicted RBP21.1■□□□□ 0.97
HMGN1-203ENST00000380748 OS9Q13438 667 aaPredicted RBP21.1■□□□□ 0.97
HMGN1-203ENST00000380748 ADGRE1Q14246 886 aa21.1■□□□□ 0.97
HMGN1-203ENST00000380748 SPICE1Q8N0Z3 855 aa21.1■□□□□ 0.97
HMGN1-203ENST00000380748 FAM122AQ96E09 287 aa21.1■□□□□ 0.97
HMGN1-203ENST00000380748 TOX2Q96NM4 488 aa21.1■□□□□ 0.97
HMGN1-203ENST00000380748 PARP14Q460N5 1801 aa21.1■□□□□ 0.97
HMGN1-203ENST00000380748 DCDC2CA8MYV0 355 aa21.09■□□□□ 0.97
HMGN1-203ENST00000380748 ZNF865P0CJ78 1059 aaPredicted RBP21.09■□□□□ 0.97
HMGN1-203ENST00000380748 TMEM132BQ14DG7 1078 aa21.09■□□□□ 0.97
HMGN1-203ENST00000380748 CCDC85BQ15834 202 aaPredicted RBP21.09■□□□□ 0.97
HMGN1-203ENST00000380748 CCDC129Q6ZRS4 1044 aa21.09■□□□□ 0.97
HMGN1-203ENST00000380748 C16orf59Q7L2K0 433 aa21.09■□□□□ 0.97
HMGN1-203ENST00000380748 CLEC10AQ8IUN9 316 aa21.09■□□□□ 0.97
HMGN1-203ENST00000380748 MMP19Q99542 508 aa21.09■□□□□ 0.97
HMGN1-203ENST00000380748 RIOK1Q9BRS2 568 aaKnown RBP21.09■□□□□ 0.97
HMGN1-203ENST00000380748 TINF2Q9BSI4 451 aa21.09■□□□□ 0.97
HMGN1-203ENST00000380748 ANTXR1Q9H6X2 564 aa21.09■□□□□ 0.97
HMGN1-203ENST00000380748 STARD7Q9NQZ5 370 aa21.09■□□□□ 0.97
HMGN1-203ENST00000380748 TBX21Q9UL17 535 aa21.09■□□□□ 0.97
HMGN1-203ENST00000380748 XIRP2A4UGR9 3374 aa21.09■□□□□ 0.97
HMGN1-203ENST00000380748 COL11A1P12107 1806 aaPredicted RBP21.08■□□□□ 0.97
HMGN1-203ENST00000380748 AKR1A1P14550 325 aa21.08■□□□□ 0.97
HMGN1-203ENST00000380748 ACLYP53396 1101 aa21.08■□□□□ 0.97
HMGN1-203ENST00000380748 MRPS5P82675 430 aaKnown RBP21.08■□□□□ 0.97
HMGN1-203ENST00000380748 MAP3K12Q12852 859 aa21.08■□□□□ 0.97
HMGN1-203ENST00000380748 POLA2Q14181 598 aa21.08■□□□□ 0.97
HMGN1-203ENST00000380748 TMEM240Q5SV17 173 aa21.08■□□□□ 0.97
HMGN1-203ENST00000380748 CCDC8Q9H0W5 538 aaPredicted RBP21.08■□□□□ 0.97
HMGN1-203ENST00000380748 SYNRGQ9UMZ2 1314 aa21.07■□□□□ 0.96
HMGN1-203ENST00000380748 ZNF792Q3KQV3 632 aa21.07■□□□□ 0.96
HMGN1-203ENST00000380748 RASIP1Q5U651 963 aa21.07■□□□□ 0.96
HMGN1-203ENST00000380748 MFSD5Q6N075 450 aa21.07■□□□□ 0.96
HMGN1-203ENST00000380748 TSEN34Q9BSV6 310 aaKnown RBP21.07■□□□□ 0.96
HMGN1-203ENST00000380748 SLC25A27O95847 323 aa21.06■□□□□ 0.96
HMGN1-203ENST00000380748 TRIM27P14373 513 aa21.06■□□□□ 0.96
HMGN1-203ENST00000380748 PPIGQ13427 754 aaKnown RBP eCLIP21.06■□□□□ 0.965e-19■■□□□ 12
HMGN1-203ENST00000380748 TMEM179Q6ZVK1 233 aa21.06■□□□□ 0.96
HMGN1-203ENST00000380748 SIAH1Q8IUQ4 282 aa21.06■□□□□ 0.96
HMGN1-203ENST00000380748 NUP133Q8WUM0 1156 aa21.06■□□□□ 0.96
HMGN1-203ENST00000380748 SURF6O75683 361 aaKnown RBP21.05■□□□□ 0.96
HMGN1-203ENST00000380748 CYP2D6P10635 497 aa21.05■□□□□ 0.96
HMGN1-203ENST00000380748 CSF2RAP15509 400 aa21.05■□□□□ 0.96
HMGN1-203ENST00000380748 IGFBP4P22692 258 aa21.05■□□□□ 0.96
HMGN1-203ENST00000380748 KCNA10Q16322 511 aa21.05■□□□□ 0.96
HMGN1-203ENST00000380748 NECAB3Q96P71 396 aaPredicted RBP21.05■□□□□ 0.96
HMGN1-203ENST00000380748 MCM9Q9NXL9 1143 aa21.05■□□□□ 0.96
HMGN1-203ENST00000380748 DIS3Q9Y2L1 958 aaKnown RBP21.05■□□□□ 0.96
HMGN1-203ENST00000380748 MYADML2A6NDP7 307 aa21.04■□□□□ 0.96
HMGN1-203ENST00000380748 ACRP10323 421 aa21.04■□□□□ 0.96
HMGN1-203ENST00000380748 IRX5P78411 483 aaPredicted RBP21.04■□□□□ 0.96
HMGN1-203ENST00000380748 KCTD2Q14681 263 aa21.04■□□□□ 0.96
HMGN1-203ENST00000380748 CCSAPQ6IQ19 270 aaPredicted RBP21.04■□□□□ 0.96
HMGN1-203ENST00000380748 KLHDC9Q8NEP7 349 aa21.04■□□□□ 0.96
HMGN1-203ENST00000380748 IL27Q8NEV9 243 aa21.04■□□□□ 0.96
HMGN1-203ENST00000380748 SSH3Q8TE77 659 aa21.04■□□□□ 0.96
HMGN1-203ENST00000380748 EAF2Q96CJ1 260 aaPredicted RBP21.04■□□□□ 0.96
HMGN1-203ENST00000380748 VCPKMTQ9H867 229 aa21.04■□□□□ 0.96
HMGN1-203ENST00000380748 FBXO28Q9NVF7 368 aa21.04■□□□□ 0.96
HMGN1-203ENST00000380748 CNPY2Q9Y2B0 182 aa21.04■□□□□ 0.96
HMGN1-203ENST00000380748 TMX2Q9Y320 296 aa21.04■□□□□ 0.96
HMGN1-203ENST00000380748 MAGEB6P1A0A0J9YX57 407 aa21.03■□□□□ 0.96
HMGN1-203ENST00000380748 MOXD2PA6NHM9 499 aa21.03■□□□□ 0.96
HMGN1-203ENST00000380748 BCAR3O75815 825 aa21.03■□□□□ 0.96
HMGN1-203ENST00000380748 ICA1Q05084 483 aa21.03■□□□□ 0.96
HMGN1-203ENST00000380748 CCDC174Q6PII3 467 aa21.03■□□□□ 0.96
HMGN1-203ENST00000380748 ZNF365Q70YC5 407 aa21.03■□□□□ 0.96
HMGN1-203ENST00000380748 RIOX2Q8IUF8 465 aa21.03■□□□□ 0.96
HMGN1-203ENST00000380748 CLUAP1Q96AJ1 413 aa21.03■□□□□ 0.96
HMGN1-203ENST00000380748 ARHGEF10LQ9HCE6 1279 aa21.03■□□□□ 0.96
HMGN1-203ENST00000380748 ADAMTS5Q9UNA0 930 aa21.03■□□□□ 0.96
HMGN1-203ENST00000380748 WDR46O15213 610 aaKnown RBP21.02■□□□□ 0.96
HMGN1-203ENST00000380748 AKR1B1P15121 316 aa21.02■□□□□ 0.96
HMGN1-203ENST00000380748 DYNLL2Q96FJ2 89 aa21.02■□□□□ 0.96
HMGN1-203ENST00000380748 CRNKL1Q9BZJ0 848 aaKnown RBP21.02■□□□□ 0.96
HMGN1-203ENST00000380748 PPP1R12CQ9BZL4 782 aa21.02■□□□□ 0.96
HMGN1-203ENST00000380748 TCF20Q9UGU0 1960 aaKnown RBP21.02■□□□□ 0.96
HMGN1-203ENST00000380748 MYH8P13535 1937 aa21.02■□□□□ 0.95
HMGN1-203ENST00000380748 GBF1Q92538 1859 aa21.01■□□□□ 0.95
HMGN1-203ENST00000380748 HOXD11P31277 338 aaPredicted RBP21.01■□□□□ 0.95
HMGN1-203ENST00000380748 STAT3P40763 770 aa21.01■□□□□ 0.95
HMGN1-203ENST00000380748 CDK7P50613 346 aa21.01■□□□□ 0.95
HMGN1-203ENST00000380748 ATP8B2P98198 1209 aa21.01■□□□□ 0.95
HMGN1-203ENST00000380748 PSRC1Q6PGN9 363 aaPredicted RBP21.01■□□□□ 0.95
HMGN1-203ENST00000380748 TMED8Q6PL24 325 aaPredicted RBP21.01■□□□□ 0.95
HMGN1-203ENST00000380748 PIAS4Q8N2W9 510 aaPredicted RBP21.01■□□□□ 0.95
HMGN1-203ENST00000380748 TMEM199Q8N511 208 aa21.01■□□□□ 0.95
HMGN1-203ENST00000380748 SDR42E1Q8WUS8 393 aa21.01■□□□□ 0.95
HMGN1-203ENST00000380748 GLT1D1Q96MS3 346 aa21.01■□□□□ 0.95
HMGN1-203ENST00000380748 NKX2-4Q9H2Z4 354 aa21.01■□□□□ 0.95
HMGN1-203ENST00000380748 MSRAQ9UJ68 235 aa21.01■□□□□ 0.95
HMGN1-203ENST00000380748 FAM184BQ9ULE4 1060 aa21.01■□□□□ 0.95
HMGN1-203ENST00000380748 MROH7Q68CQ1 1323 aa21.01■□□□□ 0.95
HMGN1-203ENST00000380748 APBB1O00213 710 aa21■□□□□ 0.95
HMGN1-203ENST00000380748 VWA5AO00534 786 aa21■□□□□ 0.95
HMGN1-203ENST00000380748 SNAI1O95863 264 aaPredicted RBP21■□□□□ 0.95
HMGN1-203ENST00000380748 RAB30Q15771 203 aa21■□□□□ 0.95
HMGN1-203ENST00000380748 SH2D4AQ9H788 454 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms