RNA–Protein interactions for RNA: ENST00000366442.2

SHC1-201, Transcript of SHC adaptor protein 1, humanhuman

TSL 3

Gene SHC1, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-201ENST00000366442 MKL1Q969V6 931 aa28.11■■■□□ 2.09
SHC1-201ENST00000366442 MROH8Q9H579 483 aa28.11■■■□□ 2.09
SHC1-201ENST00000366442 MTMR4Q9NYA4 1195 aa28.11■■■□□ 2.09
SHC1-201ENST00000366442 PPP1R9AQ9ULJ8 1098 aa28.11■■■□□ 2.09
SHC1-201ENST00000366442 CACNB2Q08289 660 aaPredicted RBP28.1■■■□□ 2.09
SHC1-201ENST00000366442 FAM83BQ5T0W9 1011 aa28.1■■■□□ 2.09
SHC1-201ENST00000366442 PLEKHM2Q8IWE5 1019 aa28.1■■■□□ 2.09
SHC1-201ENST00000366442 NEDD1Q8NHV4 660 aa28.1■■■□□ 2.09
SHC1-201ENST00000366442 CEP95Q96GE4 821 aa28.1■■■□□ 2.09
SHC1-201ENST00000366442 CEP290O15078 2479 aa28.1■■■□□ 2.09
SHC1-201ENST00000366442 F5H6K3 240 aa28.09■■■□□ 2.09
SHC1-201ENST00000366442 RAD21O60216 631 aa28.09■■■□□ 2.09
SHC1-201ENST00000366442 TSPY3P0CV98 308 aa28.09■■■□□ 2.09
SHC1-201ENST00000366442 TSPY8P0CW00 308 aa28.09■■■□□ 2.09
SHC1-201ENST00000366442 KLRC3Q07444 240 aa28.09■■■□□ 2.09
SHC1-201ENST00000366442 ALX1Q15699 326 aa28.09■■■□□ 2.09
SHC1-201ENST00000366442 MCMDC2Q4G0Z9 681 aa28.09■■■□□ 2.09
SHC1-201ENST00000366442 FBXO28Q9NVF7 368 aa28.09■■■□□ 2.09
SHC1-201ENST00000366442 CLIP2Q9UDT6 1046 aa28.09■■■□□ 2.09
SHC1-201ENST00000366442 MYH4Q9Y623 1939 aa28.09■■■□□ 2.09
SHC1-201ENST00000366442 A0A0D9SFI3 127 aa28.08■■■□□ 2.09
SHC1-201ENST00000366442 TRIM6-TRIM34B2RNG4 842 aa28.08■■■□□ 2.09
SHC1-201ENST00000366442 SLC25A27O95847 323 aa28.08■■■□□ 2.09
SHC1-201ENST00000366442 TTLL1O95922 423 aa28.08■■■□□ 2.09
SHC1-201ENST00000366442 NDUFB10O96000 172 aa28.08■■■□□ 2.09
SHC1-201ENST00000366442 PLS1Q14651 629 aa28.08■■■□□ 2.09
SHC1-201ENST00000366442 TMEM132BQ14DG7 1078 aa28.08■■■□□ 2.09
SHC1-201ENST00000366442 VPS53Q5VIR6 699 aa28.08■■■□□ 2.09
SHC1-201ENST00000366442 MFSD14CQ5VZR4 134 aa28.08■■■□□ 2.09
SHC1-201ENST00000366442 ABRAQ8N0Z2 381 aa28.08■■■□□ 2.09
SHC1-201ENST00000366442 FAM227BQ96M60 508 aa28.08■■■□□ 2.09
SHC1-201ENST00000366442 ANAPC4Q9UJX5 808 aa28.08■■■□□ 2.09
SHC1-201ENST00000366442 COL11A1P12107 1806 aaPredicted RBP28.07■■■□□ 2.08
SHC1-201ENST00000366442 VWA5AO00534 786 aa28.07■■■□□ 2.08
SHC1-201ENST00000366442 ADORA2AP29274 412 aa28.07■■■□□ 2.08
SHC1-201ENST00000366442 DPF3Q92784 378 aa28.07■■■□□ 2.08
SHC1-201ENST00000366442 FLRT1Q9NZU1 646 aa28.07■■■□□ 2.08
SHC1-201ENST00000366442 OGDHLQ9ULD0 1010 aa28.07■■■□□ 2.08
SHC1-201ENST00000366442 DDX52Q9Y2R4 599 aaKnown RBP eCLIP28.07■■■□□ 2.08
SHC1-201ENST00000366442 IGHA2P01877 340 aa28.06■■■□□ 2.08
SHC1-201ENST00000366442 TFAP4Q01664 338 aa28.06■■■□□ 2.08
SHC1-201ENST00000366442 PPP4R3BQ5MIZ7 849 aa28.06■■■□□ 2.08
SHC1-201ENST00000366442 SAMD1Q6SPF0 538 aaPredicted RBP28.06■■■□□ 2.08
SHC1-201ENST00000366442 DPP9Q86TI2 863 aa28.06■■■□□ 2.08
SHC1-201ENST00000366442 NCAPG2Q86XI2 1143 aa28.06■■■□□ 2.08
SHC1-201ENST00000366442 GMCL1P1Q8NEA9 526 aa28.06■■■□□ 2.08
SHC1-201ENST00000366442 NPLOC4Q8TAT6 608 aa28.06■■■□□ 2.08
SHC1-201ENST00000366442 RILPL2Q969X0 211 aa28.06■■■□□ 2.08
SHC1-201ENST00000366442 SLF1Q9BQI6 1058 aa28.06■■■□□ 2.08
SHC1-201ENST00000366442 FAM47AQ5JRC9 791 aa28.05■■■□□ 2.08
SHC1-201ENST00000366442 NECAB2Q7Z6G3 386 aa28.05■■■□□ 2.08
SHC1-201ENST00000366442 RIOX2Q8IUF8 465 aa28.05■■■□□ 2.08
SHC1-201ENST00000366442 REPS2Q8NFH8 660 aa28.05■■■□□ 2.08
SHC1-201ENST00000366442 NUP88Q99567 741 aaPredicted RBP28.05■■■□□ 2.08
SHC1-201ENST00000366442 ZMYM6O95789 1325 aa28.04■■■□□ 2.08
SHC1-201ENST00000366442 COPB2P35606 906 aa28.04■■■□□ 2.08
SHC1-201ENST00000366442 CTDSPL2Q05D32 466 aa28.04■■■□□ 2.08
SHC1-201ENST00000366442 NMIQ13287 307 aaPredicted RBP28.04■■■□□ 2.08
SHC1-201ENST00000366442 OLFML2BQ68BL8 750 aa28.04■■■□□ 2.08
SHC1-201ENST00000366442 PAWRQ96IZ0 340 aaKnown RBP28.04■■■□□ 2.08
SHC1-201ENST00000366442 SLC5A4Q9NY91 659 aa28.04■■■□□ 2.08
SHC1-201ENST00000366442 ZNF214Q9UL59 606 aaPredicted RBP28.04■■■□□ 2.08
SHC1-201ENST00000366442 CCND3P30281 292 aaPredicted RBP28.03■■■□□ 2.08
SHC1-201ENST00000366442 STAT3P40763 770 aa28.03■■■□□ 2.08
SHC1-201ENST00000366442 PRPF38AQ8NAV1 312 aaKnown RBP28.03■■■□□ 2.08
SHC1-201ENST00000366442 H0YGN5 161 aa28.02■■■□□ 2.08
SHC1-201ENST00000366442 FGAP02671 866 aa28.02■■■□□ 2.08
SHC1-201ENST00000366442 FGRP09769 529 aa28.02■■■□□ 2.08
SHC1-201ENST00000366442 HSPD1P10809 573 aaKnown RBP28.02■■■□□ 2.08
SHC1-201ENST00000366442 FCER1AP12319 257 aa28.02■■■□□ 2.08
SHC1-201ENST00000366442 SDSP20132 328 aa28.02■■■□□ 2.08
SHC1-201ENST00000366442 LHX8Q68G74 356 aa28.02■■■□□ 2.08
SHC1-201ENST00000366442 ZNF589Q86UQ0 364 aaPredicted RBP28.02■■■□□ 2.08
SHC1-201ENST00000366442 DIS3LQ8TF46 1054 aaKnown RBP28.02■■■□□ 2.08
SHC1-201ENST00000366442 CCDC171Q6TFL3 1326 aa28.01■■■□□ 2.07
SHC1-201ENST00000366442 TSPY2A6NKD2 308 aa28.01■■■□□ 2.07
SHC1-201ENST00000366442 ORC4O43929 436 aa28.01■■■□□ 2.07
SHC1-201ENST00000366442 COBLO75128 1261 aa28.01■■■□□ 2.07
SHC1-201ENST00000366442 MNX1P50219 401 aaPredicted RBP28.01■■■□□ 2.07
SHC1-201ENST00000366442 MFAP1P55081 439 aaKnown RBP28.01■■■□□ 2.07
SHC1-201ENST00000366442 LRRC47Q8N1G4 583 aaKnown RBP28.01■■■□□ 2.07
SHC1-201ENST00000366442 NBPF3Q9H094 633 aa28.01■■■□□ 2.07
SHC1-201ENST00000366442 FEM1BQ9UK73 627 aa28.01■■■□□ 2.07
SHC1-201ENST00000366442 NR2E3Q9Y5X4 410 aa28■■■□□ 2.07
SHC1-201ENST00000366442 ATP2A1O14983 1001 aa27.99■■■□□ 2.07
SHC1-201ENST00000366442 SLC34A2O95436 690 aa27.99■■■□□ 2.07
SHC1-201ENST00000366442 CYP2C19P33261 490 aa27.99■■■□□ 2.07
SHC1-201ENST00000366442 SLFN13Q68D06 897 aa27.99■■■□□ 2.07
SHC1-201ENST00000366442 TEX13BQ9BXU2 312 aa27.99■■■□□ 2.07
SHC1-201ENST00000366442 INCENPQ9NQS7 918 aa27.99■■■□□ 2.07
SHC1-201ENST00000366442 TACC3Q9Y6A5 838 aa27.99■■■□□ 2.07
SHC1-201ENST00000366442 ZNFX1Q9P2E3 1918 aaKnown RBP27.98■■■□□ 2.07
SHC1-201ENST00000366442 MSCO60682 206 aa27.98■■■□□ 2.07
SHC1-201ENST00000366442 BMP3P12645 472 aa27.98■■■□□ 2.07
SHC1-201ENST00000366442 GMCL1Q96IK5 515 aa27.98■■■□□ 2.07
SHC1-201ENST00000366442 MMP19Q99542 508 aa27.98■■■□□ 2.07
SHC1-201ENST00000366442 IL17RBQ9NRM6 502 aa27.98■■■□□ 2.07
SHC1-201ENST00000366442 HIP1O00291 1037 aa27.97■■■□□ 2.07
SHC1-201ENST00000366442 RANBP6O60518 1105 aaKnown RBP27.97■■■□□ 2.07
SHC1-201ENST00000366442 ZBED4O75132 1171 aa27.97■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms