RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 SCN9AQ15858 1988 aa33.94■■■■□ 3.02
PABPN1-201ENST00000216727 BIN1O00499 593 aa33.93■■■■□ 3.02
PABPN1-201ENST00000216727 POLR2DO15514 142 aaKnown RBP33.93■■■■□ 3.02
PABPN1-201ENST00000216727 HLA-DOAP06340 250 aa33.93■■■■□ 3.02
PABPN1-201ENST00000216727 ZNF174Q15697 407 aa33.93■■■■□ 3.02
PABPN1-201ENST00000216727 TYW1BQ6NUM6 668 aa33.93■■■■□ 3.02
PABPN1-201ENST00000216727 EHD4Q9H223 541 aa33.93■■■■□ 3.02
PABPN1-201ENST00000216727 MTMR7Q9Y216 660 aa33.93■■■■□ 3.02
PABPN1-201ENST00000216727 MYH8P13535 1937 aa33.93■■■■□ 3.02
PABPN1-201ENST00000216727 GOLGA8HP0CJ92 632 aa33.92■■■■□ 3.02
PABPN1-201ENST00000216727 KIAA2012Q0VF49 1180 aa33.92■■■■□ 3.02
PABPN1-201ENST00000216727 STXBP3O00186 592 aa33.92■■■■□ 3.02
PABPN1-201ENST00000216727 AKR1B1P15121 316 aa33.92■■■■□ 3.02
PABPN1-201ENST00000216727 KANK3Q6NY19 840 aa33.92■■■■□ 3.02
PABPN1-201ENST00000216727 SUPT20HQ8NEM7 779 aa33.92■■■■□ 3.02
PABPN1-201ENST00000216727 USP17L2Q6R6M4 530 aa33.91■■■■□ 3.02
PABPN1-201ENST00000216727 KIAA0825Q8IV33 1275 aa33.91■■■■□ 3.02
PABPN1-201ENST00000216727 SPC24Q8NBT2 197 aa33.91■■■■□ 3.02
PABPN1-201ENST00000216727 MRFAP1L1Q96HT8 127 aa33.91■■■■□ 3.02
PABPN1-201ENST00000216727 ZNF219Q9P2Y4 722 aaPredicted RBP33.91■■■■□ 3.02
PABPN1-201ENST00000216727 ADAMTS3O15072 1205 aa33.91■■■■□ 3.02
PABPN1-201ENST00000216727 SHMT1P34896 483 aa33.91■■■■□ 3.02
PABPN1-201ENST00000216727 PTGDRQ13258 359 aa33.91■■■■□ 3.02
PABPN1-201ENST00000216727 NFIAQ12857 509 aa33.9■■■■□ 3.02
PABPN1-201ENST00000216727 HEATR3Q7Z4Q2 680 aa33.9■■■■□ 3.02
PABPN1-201ENST00000216727 FOXP4Q8IVH2 680 aaPredicted RBP33.9■■■■□ 3.02
PABPN1-201ENST00000216727 TTC12Q9H892 705 aaPredicted RBP33.9■■■■□ 3.02
PABPN1-201ENST00000216727 ZNF830Q96NB3 372 aaPredicted RBP33.89■■■■□ 3.02
PABPN1-201ENST00000216727 SERPINA10Q9UK55 444 aa33.89■■■■□ 3.02
PABPN1-201ENST00000216727 PCDHA5Q9Y5H7 936 aa33.89■■■■□ 3.02
PABPN1-201ENST00000216727 NPM3O75607 178 aaKnown RBP33.89■■■■□ 3.02
PABPN1-201ENST00000216727 PDHBP11177 359 aa33.89■■■■□ 3.02
PABPN1-201ENST00000216727 POSTNQ15063 836 aa33.89■■■■□ 3.02
PABPN1-201ENST00000216727 NT5DC1Q5TFE4 455 aa33.89■■■■□ 3.02
PABPN1-201ENST00000216727 USP49Q70CQ1 688 aa33.89■■■■□ 3.02
PABPN1-201ENST00000216727 RASGRP2Q7LDG7 609 aa33.89■■■■□ 3.02
PABPN1-201ENST00000216727 CCDC12Q8WUD4 166 aaPredicted RBP33.89■■■■□ 3.02
PABPN1-201ENST00000216727 IDI2Q9BXS1 227 aa33.89■■■■□ 3.02
PABPN1-201ENST00000216727 DHX36Q9H2U1 1008 aaKnown RBP33.89■■■■□ 3.02
PABPN1-201ENST00000216727 SERTAD1Q9UHV2 236 aa33.89■■■■□ 3.02
PABPN1-201ENST00000216727 SMTNL1A8MU46 457 aa33.88■■■■□ 3.01
PABPN1-201ENST00000216727 ACTN4O43707 911 aaKnown RBP33.88■■■■□ 3.01
PABPN1-201ENST00000216727 AOC3Q16853 763 aa33.88■■■■□ 3.01
PABPN1-201ENST00000216727 GRIPAP1Q4V328 841 aa33.88■■■■□ 3.01
PABPN1-201ENST00000216727 RRP36Q96EU6 259 aaKnown RBP33.88■■■■□ 3.01
PABPN1-201ENST00000216727 IKBKBO14920 756 aa33.87■■■■□ 3.01
PABPN1-201ENST00000216727 TTLL1O95922 423 aa33.87■■■■□ 3.01
PABPN1-201ENST00000216727 SNHG28P0DPA3 235 aa33.87■■■■□ 3.01
PABPN1-201ENST00000216727 ZMYND12Q9H0C1 365 aa33.87■■■■□ 3.01
PABPN1-201ENST00000216727 USP17L5A8MUK1 530 aa33.87■■■■□ 3.01
PABPN1-201ENST00000216727 ASPRV1Q53RT3 343 aa33.87■■■■□ 3.01
PABPN1-201ENST00000216727 ARL6IP4Q66PJ3 421 aaKnown RBP33.87■■■■□ 3.01
PABPN1-201ENST00000216727 RIOX1Q9H6W3 641 aa33.87■■■■□ 3.01
PABPN1-201ENST00000216727 PCDHA6Q9UN73 950 aa33.87■■■■□ 3.01
PABPN1-201ENST00000216727 PCDHA8Q9Y5H6 950 aa33.87■■■■□ 3.01
PABPN1-201ENST00000216727 CCDC34Q96HJ3 373 aa33.86■■■■□ 3.01
PABPN1-201ENST00000216727 CCDC194A0A1B0GVG4 234 aa33.86■■■■□ 3.01
PABPN1-201ENST00000216727 SYMPKQ92797 1274 aaKnown RBP33.86■■■■□ 3.01
PABPN1-201ENST00000216727 CCDC17Q96LX7 622 aa33.86■■■■□ 3.01
PABPN1-201ENST00000216727 GREB1LQ9C091 1923 aaPredicted RBP33.85■■■■□ 3.01
PABPN1-201ENST00000216727 PPP4R3BQ5MIZ7 849 aa33.85■■■■□ 3.01
PABPN1-201ENST00000216727 DRC7Q8IY82 874 aa33.85■■■■□ 3.01
PABPN1-201ENST00000216727 EPSTI1Q96J88 318 aa33.85■■■■□ 3.01
PABPN1-201ENST00000216727 SEC63Q9UGP8 760 aaKnown RBP33.85■■■■□ 3.01
PABPN1-201ENST00000216727 FOXN1O15353 648 aa33.84■■■■□ 3.01
PABPN1-201ENST00000216727 SARSP49591 514 aaKnown RBP33.84■■■■□ 3.01
PABPN1-201ENST00000216727 NCAPHQ15003 741 aa33.84■■■■□ 3.01
PABPN1-201ENST00000216727 PDILTQ8N807 584 aa33.84■■■■□ 3.01
PABPN1-201ENST00000216727 CPVLQ9H3G5 476 aa33.84■■■■□ 3.01
PABPN1-201ENST00000216727 CLIP2Q9UDT6 1046 aa33.84■■■■□ 3.01
PABPN1-201ENST00000216727 hCG_1984214I3L0E3 225 aa33.84■■■■□ 3.01
PABPN1-201ENST00000216727 MCM7P33993 719 aa33.84■■■■□ 3.01
PABPN1-201ENST00000216727 TPM4P67936 248 aa33.84■■■■□ 3.01
PABPN1-201ENST00000216727 ZNF713Q8N859 430 aaPredicted RBP33.84■■■■□ 3.01
PABPN1-201ENST00000216727 OFD1O75665 1012 aa33.83■■■■□ 3.01
PABPN1-201ENST00000216727 ZFPM1Q8IX07 1006 aa33.83■■■■□ 3.01
PABPN1-201ENST00000216727 C4orf32Q8N8J7 132 aa33.83■■■■□ 3.01
PABPN1-201ENST00000216727 KCNF1Q9H3M0 494 aa33.83■■■■□ 3.01
PABPN1-201ENST00000216727 VWA3AA6NCI4 1184 aa33.82■■■■□ 3.01
PABPN1-201ENST00000216727 SLFN14P0C7P3 912 aa33.82■■■■□ 3.01
PABPN1-201ENST00000216727 NAPAP54920 295 aa33.82■■■■□ 3.01
PABPN1-201ENST00000216727 ISM2Q6H9L7 571 aa33.82■■■■□ 3.01
PABPN1-201ENST00000216727 SPATA20Q8TB22 786 aa33.82■■■■□ 3.01
PABPN1-201ENST00000216727 RASGRP4Q8TDF6 673 aa33.82■■■■□ 3.01
PABPN1-201ENST00000216727 FAM198AQ9UFP1 575 aa33.82■■■■□ 3.01
PABPN1-201ENST00000216727 GNA11P29992 359 aa33.82■■■■□ 3
PABPN1-201ENST00000216727 BAG6P46379 1132 aa33.82■■■■□ 3
PABPN1-201ENST00000216727 RBM5P52756 815 aaKnown RBP eCLIP33.82■■■■□ 31e-6■□□□□ 8
PABPN1-201ENST00000216727 LRRC47Q8N1G4 583 aaKnown RBP33.82■■■■□ 3
PABPN1-201ENST00000216727 TRIML1Q8N9V2 468 aa33.82■■■■□ 3
PABPN1-201ENST00000216727 PCDHAC2Q9Y5I4 1007 aa33.82■■■■□ 3
PABPN1-201ENST00000216727 C6orf50Q9HD87 102 aa33.81■■■■□ 3
PABPN1-201ENST00000216727 PI4KBQ9UBF8 816 aa33.81■■■■□ 3
PABPN1-201ENST00000216727 A0A087X0B3 334 aa33.8■■■■□ 3
PABPN1-201ENST00000216727 ESYT2A0FGR8 921 aa33.8■■■■□ 3
PABPN1-201ENST00000216727 PPIP5K2O43314 1243 aa33.8■■■■□ 3
PABPN1-201ENST00000216727 C21orf2O43822 256 aa33.8■■■■□ 3
PABPN1-201ENST00000216727 CCDC186Q7Z3E2 898 aa33.8■■■■□ 3
PABPN1-201ENST00000216727 SMARCE1Q969G3 411 aa33.8■■■■□ 3
PABPN1-201ENST00000216727 PIGSQ96S52 555 aa33.8■■■■□ 3
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms