RNA–Protein interactions for RNA: ENST00000621453.4

FMR1-219, Transcript of fragile X mental retardation 1, humanhuman

TSL 1 (best) BASIC

Gene FMR1, Length 1,864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-219ENST00000621453 SHMT1P34896 483 aa32.04■■■□□ 2.72
FMR1-219ENST00000621453 SNW1Q13573 536 aaKnown RBP32.04■■■□□ 2.72
FMR1-219ENST00000621453 CFAP100Q494V2 611 aa32.04■■■□□ 2.72
FMR1-219ENST00000621453 RSBN1LQ6PCB5 846 aaPredicted RBP32.04■■■□□ 2.72
FMR1-219ENST00000621453 JMYQ8N9B5 988 aa32.04■■■□□ 2.72
FMR1-219ENST00000621453 RNF214Q8ND24 703 aa32.04■■■□□ 2.72
FMR1-219ENST00000621453 ENGASEQ8NFI3 743 aa32.04■■■□□ 2.72
FMR1-219ENST00000621453 MTMR7Q9Y216 660 aa32.04■■■□□ 2.72
FMR1-219ENST00000621453 COL4A5P29400 1685 aa32.04■■■□□ 2.72
FMR1-219ENST00000621453 SIPA1L1O43166 1804 aa32.04■■■□□ 2.72
FMR1-219ENST00000621453 ANP32BQ92688 251 aaKnown RBP32.03■■■□□ 2.72
FMR1-219ENST00000621453 BRMS1Q9HCU9 246 aa32.03■■■□□ 2.72
FMR1-219ENST00000621453 MTMR4Q9NYA4 1195 aa32.03■■■□□ 2.72
FMR1-219ENST00000621453 TCP10Q12799 353 aa32.03■■■□□ 2.72
FMR1-219ENST00000621453 LZTS2Q9BRK4 669 aa32.03■■■□□ 2.72
FMR1-219ENST00000621453 IGKV6D-41A0A0C4DH26 115 aa32.02■■■□□ 2.72
FMR1-219ENST00000621453 TOB1P50616 345 aaPredicted RBP32.02■■■□□ 2.72
FMR1-219ENST00000621453 AXDND1Q5T1B0 1012 aaPredicted RBP32.02■■■□□ 2.72
FMR1-219ENST00000621453 PIBF1Q8WXW3 757 aa32.02■■■□□ 2.72
FMR1-219ENST00000621453 VIL1P09327 827 aaKnown RBP32.01■■■□□ 2.72
FMR1-219ENST00000621453 CCDC192P0DO97 292 aa32.01■■■□□ 2.72
FMR1-219ENST00000621453 MARCKSP29966 332 aaPredicted RBP32.01■■■□□ 2.72
FMR1-219ENST00000621453 EIF4ENIF1Q9NRA8 985 aaKnown RBP32.01■■■□□ 2.72
FMR1-219ENST00000621453 BRCA1P38398 1863 aaKnown RBP32.01■■■□□ 2.72
FMR1-219ENST00000621453 PSMD14O00487 310 aa32.01■■■□□ 2.71
FMR1-219ENST00000621453 RAD17O75943 681 aa32.01■■■□□ 2.71
FMR1-219ENST00000621453 GREB1LQ9C091 1923 aaPredicted RBP32■■■□□ 2.71
FMR1-219ENST00000621453 PARP1P09874 1014 aaKnown RBP32■■■□□ 2.71
FMR1-219ENST00000621453 NPY5RQ15761 445 aa32■■■□□ 2.71
FMR1-219ENST00000621453 CKAP2LQ8IYA6 745 aa32■■■□□ 2.71
FMR1-219ENST00000621453 TDRD3Q9H7E2 651 aaKnown RBP32■■■□□ 2.71
FMR1-219ENST00000621453 CABP5Q9NP86 173 aa32■■■□□ 2.71
FMR1-219ENST00000621453 A0A1B0GVL5 298 aa31.99■■■□□ 2.71
FMR1-219ENST00000621453 DDTLA6NHG4 134 aaPredicted RBP31.99■■■□□ 2.71
FMR1-219ENST00000621453 KINO60870 393 aaKnown RBP31.99■■■□□ 2.71
FMR1-219ENST00000621453 PI4KBQ9UBF8 816 aa31.99■■■□□ 2.71
FMR1-219ENST00000621453 KLRF2D3W0D1 207 aa31.99■■■□□ 2.71
FMR1-219ENST00000621453 CYTH3O43739 400 aa31.99■■■□□ 2.71
FMR1-219ENST00000621453 DALRD3Q5D0E6 543 aaKnown RBP31.99■■■□□ 2.71
FMR1-219ENST00000621453 FMR1NBQ8N0W7 255 aaPredicted RBP31.99■■■□□ 2.71
FMR1-219ENST00000621453 PRMT6Q96LA8 375 aaPredicted RBP31.99■■■□□ 2.71
FMR1-219ENST00000621453 CTAGE5O15320 804 aa31.98■■■□□ 2.71
FMR1-219ENST00000621453 VEGFAP15692 232 aaPredicted RBP31.98■■■□□ 2.71
FMR1-219ENST00000621453 CMA1P23946 247 aa31.98■■■□□ 2.71
FMR1-219ENST00000621453 NLRP5P59047 1200 aa31.98■■■□□ 2.71
FMR1-219ENST00000621453 SLC35G1Q2M3R5 365 aa31.98■■■□□ 2.71
FMR1-219ENST00000621453 DNAJC18Q9H819 358 aa31.98■■■□□ 2.71
FMR1-219ENST00000621453 SH3GLB2Q9NR46 395 aa31.98■■■□□ 2.71
FMR1-219ENST00000621453 GOLGA8HP0CJ92 632 aa31.97■■■□□ 2.71
FMR1-219ENST00000621453 NDUFA8P51970 172 aa31.97■■■□□ 2.71
FMR1-219ENST00000621453 SH3BP5LQ7L8J4 393 aa31.97■■■□□ 2.71
FMR1-219ENST00000621453 RASGRP2Q7LDG7 609 aa31.97■■■□□ 2.71
FMR1-219ENST00000621453 ZSCAN29Q8IWY8 852 aaPredicted RBP31.97■■■□□ 2.71
FMR1-219ENST00000621453 NIM1KQ8IY84 436 aa31.97■■■□□ 2.71
FMR1-219ENST00000621453 CCDC17Q96LX7 622 aa31.97■■■□□ 2.71
FMR1-219ENST00000621453 GMLQ99445 158 aa31.97■■■□□ 2.71
FMR1-219ENST00000621453 SPZ1Q9BXG8 430 aa31.97■■■□□ 2.71
FMR1-219ENST00000621453 TTLL1O95922 423 aa31.97■■■□□ 2.71
FMR1-219ENST00000621453 HDAC9Q9UKV0 1011 aa31.97■■■□□ 2.71
FMR1-219ENST00000621453 ZNRF3Q9ULT6 936 aa31.97■■■□□ 2.71
FMR1-219ENST00000621453 FER1L6Q2WGJ9 1857 aa31.97■■■□□ 2.71
FMR1-219ENST00000621453 ENTPD3O75355 529 aa31.96■■■□□ 2.71
FMR1-219ENST00000621453 CCDC173Q0VFZ6 552 aa31.96■■■□□ 2.71
FMR1-219ENST00000621453 R3HDM1Q15032 1099 aaKnown RBP31.96■■■□□ 2.71
FMR1-219ENST00000621453 USP17L2Q6R6M4 530 aa31.96■■■□□ 2.71
FMR1-219ENST00000621453 TNFRSF25Q93038 417 aa31.96■■■□□ 2.71
FMR1-219ENST00000621453 TYRO3Q06418 890 aa31.95■■■□□ 2.71
FMR1-219ENST00000621453 PCDHB6Q9Y5E3 794 aa31.95■■■□□ 2.71
FMR1-219ENST00000621453 CUTAO60888 179 aa31.95■■■□□ 2.7
FMR1-219ENST00000621453 SMARCA1P28370 1054 aa31.95■■■□□ 2.7
FMR1-219ENST00000621453 EARS2Q5JPH6 523 aaKnown RBP31.95■■■□□ 2.7
FMR1-219ENST00000621453 CEP131Q9UPN4 1083 aa31.95■■■□□ 2.7
FMR1-219ENST00000621453 MYH4Q9Y623 1939 aa31.95■■■□□ 2.7
FMR1-219ENST00000621453 MPHOSPH10O00566 681 aaKnown RBP31.94■■■□□ 2.7
FMR1-219ENST00000621453 SLURP2P0DP57 97 aa31.94■■■□□ 2.7
FMR1-219ENST00000621453 PDHBP11177 359 aa31.94■■■□□ 2.7
FMR1-219ENST00000621453 CALML3P27482 149 aa31.94■■■□□ 2.7
FMR1-219ENST00000621453 EIF6P56537 245 aaKnown RBP31.94■■■□□ 2.7
FMR1-219ENST00000621453 FOXP4Q8IVH2 680 aaPredicted RBP31.94■■■□□ 2.7
FMR1-219ENST00000621453 GPKOWQ92917 476 aaPredicted RBP eCLIP31.94■■■□□ 2.7
FMR1-219ENST00000621453 CLIP2Q9UDT6 1046 aa31.94■■■□□ 2.7
FMR1-219ENST00000621453 FAM205CA6NFA0 338 aa31.93■■■□□ 2.7
FMR1-219ENST00000621453 SPDYE2BA6NHP3 402 aa31.93■■■□□ 2.7
FMR1-219ENST00000621453 USP17L5A8MUK1 530 aa31.93■■■□□ 2.7
FMR1-219ENST00000621453 SPDYE6P0CI01 402 aa31.93■■■□□ 2.7
FMR1-219ENST00000621453 UVSSAQ2YD98 709 aa31.93■■■□□ 2.7
FMR1-219ENST00000621453 CLEC10AQ8IUN9 316 aa31.93■■■□□ 2.7
FMR1-219ENST00000621453 LRRC47Q8N1G4 583 aaKnown RBP31.93■■■□□ 2.7
FMR1-219ENST00000621453 OGFOD1Q8N543 542 aa31.93■■■□□ 2.7
FMR1-219ENST00000621453 TRIM34Q9BYJ4 488 aa31.93■■■□□ 2.7
FMR1-219ENST00000621453 PPP1R1BQ9UD71 204 aaPredicted RBP31.93■■■□□ 2.7
FMR1-219ENST00000621453 ATRNL1Q5VV63 1379 aa31.93■■■□□ 2.7
FMR1-219ENST00000621453 COL2A1P02458 1487 aaPredicted RBP31.93■■■□□ 2.7
FMR1-219ENST00000621453 PFKFB1P16118 471 aa31.93■■■□□ 2.7
FMR1-219ENST00000621453 PPP4R3BQ5MIZ7 849 aa31.93■■■□□ 2.7
FMR1-219ENST00000621453 KRI1Q8N9T8 703 aaKnown RBP31.93■■■□□ 2.7
FMR1-219ENST00000621453 NOL7Q9UMY1 257 aaKnown RBP31.93■■■□□ 2.7
FMR1-219ENST00000621453 ZBTB12Q9Y330 459 aaPredicted RBP31.93■■■□□ 2.7
FMR1-219ENST00000621453 SASS6Q6UVJ0 657 aa31.92■■■□□ 2.7
FMR1-219ENST00000621453 PPP1R9BQ96SB3 815 aa31.92■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms