RNA–Protein interactions for RNA: ENST00000578402.5

LIMD2-205, Transcript of LIM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD2, Length 1,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-205ENST00000578402 XBP1P17861 261 aa26.5■■□□□ 1.83
LIMD2-205ENST00000578402 SMARCA1P28370 1054 aa26.5■■□□□ 1.83
LIMD2-205ENST00000578402 GUCY1A2P33402 732 aa26.5■■□□□ 1.83
LIMD2-205ENST00000578402 KIF23Q02241 960 aaPredicted RBP26.5■■□□□ 1.83
LIMD2-205ENST00000578402 OTUD7BQ6GQQ9 843 aa26.5■■□□□ 1.83
LIMD2-205ENST00000578402 KANSL2Q9H9L4 492 aa26.5■■□□□ 1.83
LIMD2-205ENST00000578402 CFAP45Q9UL16 551 aa26.5■■□□□ 1.83
LIMD2-205ENST00000578402 DDX49Q9Y6V7 483 aaKnown RBP26.5■■□□□ 1.83
LIMD2-205ENST00000578402 PKN1Q16512 942 aa26.49■■□□□ 1.83
LIMD2-205ENST00000578402 NYAP2Q9P242 653 aa26.49■■□□□ 1.83
LIMD2-205ENST00000578402 V9GY48 417 aaPredicted RBP26.49■■□□□ 1.83
LIMD2-205ENST00000578402 H7C1D1 291 aa26.49■■□□□ 1.83
LIMD2-205ENST00000578402 FIBPO43427 364 aa26.49■■□□□ 1.83
LIMD2-205ENST00000578402 PARP1P09874 1014 aaKnown RBP26.49■■□□□ 1.83
LIMD2-205ENST00000578402 FAM173BQ6P4H8 233 aa26.49■■□□□ 1.83
LIMD2-205ENST00000578402 MKL1Q969V6 931 aa26.49■■□□□ 1.83
LIMD2-205ENST00000578402 ZNF396Q96N95 335 aaPredicted RBP26.49■■□□□ 1.83
LIMD2-205ENST00000578402 PGAP2Q9UHJ9 254 aa26.49■■□□□ 1.83
LIMD2-205ENST00000578402 FAM196BA6NMK8 535 aa26.48■■□□□ 1.83
LIMD2-205ENST00000578402 MMP1P03956 469 aa26.48■■□□□ 1.83
LIMD2-205ENST00000578402 SNHG28P0DPA3 235 aa26.48■■□□□ 1.83
LIMD2-205ENST00000578402 ABCB5Q2M3G0 1257 aa26.48■■□□□ 1.83
LIMD2-205ENST00000578402 KIF4BQ2VIQ3 1234 aa26.48■■□□□ 1.83
LIMD2-205ENST00000578402 SPZ1Q9BXG8 430 aa26.48■■□□□ 1.83
LIMD2-205ENST00000578402 XPO5Q9HAV4 1204 aaKnown RBP eCLIP26.48■■□□□ 1.83
LIMD2-205ENST00000578402 GDPD2Q9HCC8 539 aa26.48■■□□□ 1.83
LIMD2-205ENST00000578402 GJB4Q9NTQ9 266 aa26.48■■□□□ 1.83
LIMD2-205ENST00000578402 CLIP2Q9UDT6 1046 aa26.48■■□□□ 1.83
LIMD2-205ENST00000578402 UBE2Q2LH0YL09 131 aa26.47■■□□□ 1.83
LIMD2-205ENST00000578402 MAP3K10Q02779 954 aa26.47■■□□□ 1.83
LIMD2-205ENST00000578402 SAFBQ15424 915 aaKnown RBP eCLIP26.47■■□□□ 1.83
LIMD2-205ENST00000578402 RBM26Q5T8P6 1007 aaKnown RBP26.47■■□□□ 1.83
LIMD2-205ENST00000578402 STAG2Q8N3U4 1231 aa26.47■■□□□ 1.83
LIMD2-205ENST00000578402 SLURP2P0DP57 97 aa26.46■■□□□ 1.83
LIMD2-205ENST00000578402 PDHBP11177 359 aa26.46■■□□□ 1.83
LIMD2-205ENST00000578402 U2AF2P26368 475 aaKnown RBP eCLIP26.46■■□□□ 1.83
LIMD2-205ENST00000578402 PFKFB3Q16875 520 aaPredicted RBP26.46■■□□□ 1.83
LIMD2-205ENST00000578402 ASPRV1Q53RT3 343 aa26.46■■□□□ 1.83
LIMD2-205ENST00000578402 FAM177A1Q8N128 213 aaPredicted RBP26.46■■□□□ 1.83
LIMD2-205ENST00000578402 TMEM39BQ9GZU3 492 aa26.46■■□□□ 1.83
LIMD2-205ENST00000578402 CABP5Q9NP86 173 aa26.46■■□□□ 1.83
LIMD2-205ENST00000578402 GPRC5DQ9NZD1 345 aa26.46■■□□□ 1.83
LIMD2-205ENST00000578402 SYNPO2Q9UMS6 1093 aa26.46■■□□□ 1.83
LIMD2-205ENST00000578402 EGFRP00533 1210 aa26.45■■□□□ 1.83
LIMD2-205ENST00000578402 SCG2P13521 617 aa26.45■■□□□ 1.83
LIMD2-205ENST00000578402 YBX3P16989 372 aaKnown RBP eCLIP26.45■■□□□ 1.83
LIMD2-205ENST00000578402 UBE2HP62256 183 aa26.45■■□□□ 1.83
LIMD2-205ENST00000578402 SAMD7Q7Z3H4 446 aa26.45■■□□□ 1.83
LIMD2-205ENST00000578402 MYH4Q9Y623 1939 aa26.45■■□□□ 1.83
LIMD2-205ENST00000578402 LRRC47Q8N1G4 583 aaKnown RBP26.44■■□□□ 1.82
LIMD2-205ENST00000578402 FOXP1Q9H334 677 aaPredicted RBP26.44■■□□□ 1.82
LIMD2-205ENST00000578402 KIF28PB7ZC32 967 aa26.44■■□□□ 1.82
LIMD2-205ENST00000578402 KLRF2D3W0D1 207 aa26.44■■□□□ 1.82
LIMD2-205ENST00000578402 ICA1Q05084 483 aa26.44■■□□□ 1.82
LIMD2-205ENST00000578402 RASA3Q14644 834 aa26.44■■□□□ 1.82
LIMD2-205ENST00000578402 TBC1D10BQ4KMP7 808 aaPredicted RBP26.44■■□□□ 1.82
LIMD2-205ENST00000578402 MYSM1Q5VVJ2 828 aa26.44■■□□□ 1.82
LIMD2-205ENST00000578402 LEO1Q8WVC0 666 aaPredicted RBP26.44■■□□□ 1.82
LIMD2-205ENST00000578402 SPATA32Q96LK8 384 aa26.44■■□□□ 1.82
LIMD2-205ENST00000578402 GNL2Q13823 731 aaKnown RBP26.43■■□□□ 1.82
LIMD2-205ENST00000578402 CLEC10AQ8IUN9 316 aa26.43■■□□□ 1.82
LIMD2-205ENST00000578402 GPT2Q8TD30 523 aa26.43■■□□□ 1.82
LIMD2-205ENST00000578402 PHF20Q9BVI0 1012 aa26.43■■□□□ 1.82
LIMD2-205ENST00000578402 SH3GLB2Q9NR46 395 aa26.43■■□□□ 1.82
LIMD2-205ENST00000578402 USP17L5A8MUK1 530 aa26.42■■□□□ 1.82
LIMD2-205ENST00000578402 EEF2P13639 858 aaKnown RBP26.42■■□□□ 1.82
LIMD2-205ENST00000578402 SEPT2Q15019 361 aa26.42■■□□□ 1.82
LIMD2-205ENST00000578402 USP17L2Q6R6M4 530 aa26.42■■□□□ 1.82
LIMD2-205ENST00000578402 RNF181Q9P0P0 153 aa26.42■■□□□ 1.82
LIMD2-205ENST00000578402 TFIP11Q9UBB9 837 aaKnown RBP26.42■■□□□ 1.82
LIMD2-205ENST00000578402 HACL1Q9UJ83 578 aa26.42■■□□□ 1.82
LIMD2-205ENST00000578402 CYTH3O43739 400 aa26.41■■□□□ 1.82
LIMD2-205ENST00000578402 GDF11O95390 407 aa26.41■■□□□ 1.82
LIMD2-205ENST00000578402 GH2P01242 217 aa26.41■■□□□ 1.82
LIMD2-205ENST00000578402 GPATCH4Q5T3I0 446 aaKnown RBP26.41■■□□□ 1.82
LIMD2-205ENST00000578402 APOBEC3FQ8IUX4 373 aaKnown RBP26.41■■□□□ 1.82
LIMD2-205ENST00000578402 DIS3L2Q8IYB7 885 aaKnown RBP26.41■■□□□ 1.82
LIMD2-205ENST00000578402 TEPSINQ96N21 525 aa26.41■■□□□ 1.82
LIMD2-205ENST00000578402 RCOR1Q9UKL0 485 aa26.41■■□□□ 1.82
LIMD2-205ENST00000578402 MTMR7Q9Y216 660 aa26.41■■□□□ 1.82
LIMD2-205ENST00000578402 GADD45BO75293 160 aaPredicted RBP26.4■■□□□ 1.82
LIMD2-205ENST00000578402 ZNF543Q08ER8 600 aa26.4■■□□□ 1.82
LIMD2-205ENST00000578402 RRP1BQ14684 758 aaKnown RBP26.4■■□□□ 1.82
LIMD2-205ENST00000578402 USP28Q96RU2 1077 aa26.4■■□□□ 1.82
LIMD2-205ENST00000578402 POLR3EQ9NVU0 708 aa26.4■■□□□ 1.82
LIMD2-205ENST00000578402 RTEL1Q9NZ71 1219 aa26.4■■□□□ 1.82
LIMD2-205ENST00000578402 VPS54Q9P1Q0 977 aa26.4■■□□□ 1.82
LIMD2-205ENST00000578402 KCNJ14Q9UNX9 436 aa26.4■■□□□ 1.82
LIMD2-205ENST00000578402 GOLGA8HP0CJ92 632 aa26.39■■□□□ 1.82
LIMD2-205ENST00000578402 ATP2B2Q01814 1243 aa26.39■■□□□ 1.82
LIMD2-205ENST00000578402 SLC35G1Q2M3R5 365 aa26.39■■□□□ 1.82
LIMD2-205ENST00000578402 NOSTRINQ8IVI9 506 aa26.39■■□□□ 1.82
LIMD2-205ENST00000578402 GMCL1P1Q8NEA9 526 aa26.39■■□□□ 1.82
LIMD2-205ENST00000578402 DCAF4Q8WV16 495 aa26.39■■□□□ 1.82
LIMD2-205ENST00000578402 RIOX1Q9H6W3 641 aa26.39■■□□□ 1.82
LIMD2-205ENST00000578402 BRMS1Q9HCU9 246 aa26.39■■□□□ 1.82
LIMD2-205ENST00000578402 hCG_1642624A0A1W2PR95 340 aa26.39■■□□□ 1.81
LIMD2-205ENST00000578402 SIAH1Q8IUQ4 282 aa26.39■■□□□ 1.81
LIMD2-205ENST00000578402 CDAN1Q8IWY9 1227 aa26.39■■□□□ 1.81
LIMD2-205ENST00000578402 SHISA4Q96DD7 197 aa26.39■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms