RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 ATP8A2Q9NTI2 1148 aa10.19□□□□□ -0.78
NCBP3-204ENST00000574911 GOLGA6L9A6NEM1 432 aa10.18□□□□□ -0.78
NCBP3-204ENST00000574911 PPP1R3GB7ZBB8 358 aa10.18□□□□□ -0.78
NCBP3-204ENST00000574911 ZBTB22O15209 634 aa10.18□□□□□ -0.78
NCBP3-204ENST00000574911 ADKP55263 362 aaKnown RBP10.18□□□□□ -0.78
NCBP3-204ENST00000574911 CDKAL1Q5VV42 579 aa10.18□□□□□ -0.78
NCBP3-204ENST00000574911 CTCFLQ8NI51 663 aaPredicted RBP10.18□□□□□ -0.78
NCBP3-204ENST00000574911 GSDMAQ96QA5 445 aa10.18□□□□□ -0.78
NCBP3-204ENST00000574911 SRRTQ9BXP5 876 aaKnown RBP10.18□□□□□ -0.78
NCBP3-204ENST00000574911 CRNKL1Q9BZJ0 848 aaKnown RBP10.18□□□□□ -0.78
NCBP3-204ENST00000574911 CNTNAP4Q9C0A0 1308 aa10.18□□□□□ -0.78
NCBP3-204ENST00000574911 KIAA1551Q9HCM1 1747 aa10.18□□□□□ -0.78
NCBP3-204ENST00000574911 MAST2Q6P0Q8 1798 aa10.18□□□□□ -0.78
NCBP3-204ENST00000574911 HIBADHP31937 336 aaKnown RBP10.18□□□□□ -0.78
NCBP3-204ENST00000574911 TRAPPC10P48553 1259 aa10.18□□□□□ -0.78
NCBP3-204ENST00000574911 RPS8P62241 208 aaKnown RBP10.18□□□□□ -0.78
NCBP3-204ENST00000574911 E2F4Q16254 413 aa10.18□□□□□ -0.78
NCBP3-204ENST00000574911 TMED8Q6PL24 325 aaPredicted RBP10.18□□□□□ -0.78
NCBP3-204ENST00000574911 TOGARAM2Q6ZUX3 1019 aa10.18□□□□□ -0.78
NCBP3-204ENST00000574911 DNAJC5Q9H3Z4 198 aa10.18□□□□□ -0.78
NCBP3-204ENST00000574911 PARP3Q9Y6F1 533 aa10.18□□□□□ -0.78
NCBP3-204ENST00000574911 NMT2O60551 498 aa10.17□□□□□ -0.78
NCBP3-204ENST00000574911 CYP2D6P10635 497 aa10.17□□□□□ -0.78
NCBP3-204ENST00000574911 SCG2P13521 617 aa10.17□□□□□ -0.78
NCBP3-204ENST00000574911 CASP1P29466 404 aa10.17□□□□□ -0.78
NCBP3-204ENST00000574911 PBX1P40424 430 aa10.17□□□□□ -0.78
NCBP3-204ENST00000574911 PTGDRQ13258 359 aa10.17□□□□□ -0.78
NCBP3-204ENST00000574911 PFKFB3Q16875 520 aaPredicted RBP10.17□□□□□ -0.78
NCBP3-204ENST00000574911 FAM47AQ5JRC9 791 aa10.17□□□□□ -0.78
NCBP3-204ENST00000574911 BICDL1Q6ZP65 573 aa10.17□□□□□ -0.78
NCBP3-204ENST00000574911 ANKRD2Q9GZV1 360 aa10.17□□□□□ -0.78
NCBP3-204ENST00000574911 ARPP21Q9UBL0 812 aaPredicted RBP10.17□□□□□ -0.78
NCBP3-204ENST00000574911 SYNRGQ9UMZ2 1314 aa10.17□□□□□ -0.78
NCBP3-204ENST00000574911 TEX33O43247 280 aa10.17□□□□□ -0.78
NCBP3-204ENST00000574911 IL17AQ16552 155 aa10.17□□□□□ -0.78
NCBP3-204ENST00000574911 PANX2Q96RD6 677 aa10.17□□□□□ -0.78
NCBP3-204ENST00000574911 NYXQ9GZU5 481 aa10.17□□□□□ -0.78
NCBP3-204ENST00000574911 ZNF446Q9NWS9 450 aa10.17□□□□□ -0.78
NCBP3-204ENST00000574911 TFCP2L1Q9NZI6 479 aa10.17□□□□□ -0.78
NCBP3-204ENST00000574911 IRS2Q9Y4H2 1338 aa10.17□□□□□ -0.78
NCBP3-204ENST00000574911 COL24A1Q17RW2 1714 aa10.16□□□□□ -0.78
NCBP3-204ENST00000574911 AKR1B15C9JRZ8 316 aaPredicted RBP10.16□□□□□ -0.78
NCBP3-204ENST00000574911 GTF2E1P29083 439 aaPredicted RBP10.16□□□□□ -0.78
NCBP3-204ENST00000574911 STX17P56962 302 aa10.16□□□□□ -0.78
NCBP3-204ENST00000574911 NLRP5P59047 1200 aa10.16□□□□□ -0.78
NCBP3-204ENST00000574911 RCSD1Q6JBY9 416 aa10.16□□□□□ -0.78
NCBP3-204ENST00000574911 ADD3Q9UEY8 706 aaKnown RBP10.16□□□□□ -0.78
NCBP3-204ENST00000574911 XDHP47989 1333 aa10.16□□□□□ -0.78
NCBP3-204ENST00000574911 ADAMTS3O15072 1205 aa10.16□□□□□ -0.78
NCBP3-204ENST00000574911 NPHP1O15259 732 aa10.16□□□□□ -0.78
NCBP3-204ENST00000574911 TADA3O75528 432 aa10.16□□□□□ -0.78
NCBP3-204ENST00000574911 URI1O94763 535 aaPredicted RBP10.16□□□□□ -0.78
NCBP3-204ENST00000574911 PRDX5P30044 214 aa10.16□□□□□ -0.78
NCBP3-204ENST00000574911 KLHL10Q6JEL2 608 aa10.16□□□□□ -0.78
NCBP3-204ENST00000574911 PDXDC2PQ6P474 469 aa10.16□□□□□ -0.78
NCBP3-204ENST00000574911 PIK3AP1Q6ZUJ8 805 aa10.16□□□□□ -0.78
NCBP3-204ENST00000574911 NLRP3Q96P20 1036 aa10.16□□□□□ -0.78
NCBP3-204ENST00000574911 PYM1Q9BRP8 204 aaKnown RBP10.16□□□□□ -0.78
NCBP3-204ENST00000574911 NARFQ9UHQ1 456 aa10.16□□□□□ -0.78
NCBP3-204ENST00000574911 VEGFAP15692 232 aaPredicted RBP10.15□□□□□ -0.78
NCBP3-204ENST00000574911 CASQ1P31415 396 aa10.15□□□□□ -0.78
NCBP3-204ENST00000574911 MAP3K9P80192 1104 aa10.15□□□□□ -0.78
NCBP3-204ENST00000574911 GABPB1Q06547 395 aaPredicted RBP10.15□□□□□ -0.78
NCBP3-204ENST00000574911 SMYD4Q8IYR2 804 aaPredicted RBP10.15□□□□□ -0.78
NCBP3-204ENST00000574911 KRT222Q8N1A0 295 aa10.15□□□□□ -0.78
NCBP3-204ENST00000574911 C4orf32Q8N8J7 132 aa10.15□□□□□ -0.78
NCBP3-204ENST00000574911 IQUBQ8NA54 791 aa10.15□□□□□ -0.78
NCBP3-204ENST00000574911 KIFC2Q96AC6 838 aa10.15□□□□□ -0.78
NCBP3-204ENST00000574911 CTAGE1Q96RT6 745 aa10.15□□□□□ -0.78
NCBP3-204ENST00000574911 EFCAB8A8MWE9 144 aa10.15□□□□□ -0.78
NCBP3-204ENST00000574911 GTPBP6O43824 516 aaPredicted RBP10.15□□□□□ -0.78
NCBP3-204ENST00000574911 NT5C2P49902 561 aa10.15□□□□□ -0.78
NCBP3-204ENST00000574911 GNG11P61952 73 aa10.15□□□□□ -0.78
NCBP3-204ENST00000574911 RBL2Q08999 1139 aa10.15□□□□□ -0.78
NCBP3-204ENST00000574911 ARHGAP29Q52LW3 1261 aa10.15□□□□□ -0.78
NCBP3-204ENST00000574911 RC3H1Q5TC82 1133 aaKnown RBP10.15□□□□□ -0.78
NCBP3-204ENST00000574911 SMIM5Q71RC9 77 aa10.15□□□□□ -0.78
NCBP3-204ENST00000574911 IGSF22Q8N9C0 903 aa10.15□□□□□ -0.78
NCBP3-204ENST00000574911 ANKS1AQ92625 1134 aa10.15□□□□□ -0.78
NCBP3-204ENST00000574911 PKNOX2Q96KN3 472 aa10.15□□□□□ -0.78
NCBP3-204ENST00000574911 WDR24Q96S15 920 aa10.15□□□□□ -0.78
NCBP3-204ENST00000574911 MTRQ99707 1265 aa10.15□□□□□ -0.78
NCBP3-204ENST00000574911 CARD6Q9BX69 1037 aa10.15□□□□□ -0.78
NCBP3-204ENST00000574911 NAA15Q9BXJ9 866 aaKnown RBP10.15□□□□□ -0.78
NCBP3-204ENST00000574911 MYH13Q9UKX3 1938 aa10.15□□□□□ -0.79
NCBP3-204ENST00000574911 TSPY2A6NKD2 308 aa10.14□□□□□ -0.79
NCBP3-204ENST00000574911 TM4SF1P30408 202 aa10.14□□□□□ -0.79
NCBP3-204ENST00000574911 KIF5BP33176 963 aa10.14□□□□□ -0.79
NCBP3-204ENST00000574911 CLCN6P51797 869 aa10.14□□□□□ -0.79
NCBP3-204ENST00000574911 KCNQ4P56696 695 aa10.14□□□□□ -0.79
NCBP3-204ENST00000574911 MNS1Q8NEH6 495 aa10.14□□□□□ -0.79
NCBP3-204ENST00000574911 UBXN4Q92575 508 aa10.14□□□□□ -0.79
NCBP3-204ENST00000574911 SETDB2Q96T68 719 aa10.14□□□□□ -0.79
NCBP3-204ENST00000574911 SH3GLB2Q9NR46 395 aa10.14□□□□□ -0.79
NCBP3-204ENST00000574911 LIMA1Q9UHB6 759 aaKnown RBP10.14□□□□□ -0.79
NCBP3-204ENST00000574911 SRP68Q9UHB9 627 aaKnown RBP10.14□□□□□ -0.79
NCBP3-204ENST00000574911 MKRN1Q9UHC7 482 aaKnown RBP10.14□□□□□ -0.79
NCBP3-204ENST00000574911 ITIH6Q6UXX5 1313 aa10.14□□□□□ -0.79
NCBP3-204ENST00000574911 RPS6KA4O75676 772 aa10.14□□□□□ -0.79
NCBP3-204ENST00000574911 CALML3P27482 149 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms