RNA–Protein interactions for RNA: ENST00000574379.2

NCBP3-203, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 2

Gene NCBP3, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-203ENST00000574379 PICALMQ13492 652 aa12.04□□□□□ -0.48
NCBP3-203ENST00000574379 AKNAD1Q5T1N1 836 aa12.04□□□□□ -0.48
NCBP3-203ENST00000574379 PRRT2Q7Z6L0 340 aaPredicted RBP12.04□□□□□ -0.48
NCBP3-203ENST00000574379 ZBTB47Q9UFB7 747 aaPredicted RBP12.04□□□□□ -0.48
NCBP3-203ENST00000574379 DOCK3Q8IZD9 2030 aa12.04□□□□□ -0.48
NCBP3-203ENST00000574379 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.03□□□□□ -0.48
NCBP3-203ENST00000574379 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.03□□□□□ -0.48
NCBP3-203ENST00000574379 DDTLA6NHG4 134 aaPredicted RBP12.03□□□□□ -0.48
NCBP3-203ENST00000574379 GLRX3O76003 335 aaKnown RBP12.03□□□□□ -0.48
NCBP3-203ENST00000574379 CNGA1P29973 690 aa12.03□□□□□ -0.48
NCBP3-203ENST00000574379 ADD2P35612 726 aa12.03□□□□□ -0.48
NCBP3-203ENST00000574379 NUCB1Q02818 461 aa12.03□□□□□ -0.48
NCBP3-203ENST00000574379 AAK1Q2M2I8 961 aa12.03□□□□□ -0.48
NCBP3-203ENST00000574379 SLC9C2Q5TAH2 1124 aa12.03□□□□□ -0.48
NCBP3-203ENST00000574379 CCAR1Q8IX12 1150 aaKnown RBP12.03□□□□□ -0.48
NCBP3-203ENST00000574379 MIGA1Q8NAN2 632 aa12.03□□□□□ -0.48
NCBP3-203ENST00000574379 LNPKQ9C0E8 428 aa12.03□□□□□ -0.48
NCBP3-203ENST00000574379 OSBPL5Q9H0X9 879 aaPredicted RBP12.03□□□□□ -0.48
NCBP3-203ENST00000574379 ZNF532Q9HCE3 1301 aa12.03□□□□□ -0.48
NCBP3-203ENST00000574379 PIEZO1Q92508 2521 aa12.02□□□□□ -0.48
NCBP3-203ENST00000574379 SMIM22K7EJ46 135 aa12.02□□□□□ -0.49
NCBP3-203ENST00000574379 ERC2O15083 957 aa12.02□□□□□ -0.49
NCBP3-203ENST00000574379 BMP1P13497 986 aa12.02□□□□□ -0.49
NCBP3-203ENST00000574379 PDE1AP54750 535 aa12.02□□□□□ -0.49
NCBP3-203ENST00000574379 SLFNL1Q499Z3 407 aa12.02□□□□□ -0.49
NCBP3-203ENST00000574379 MAP3K21Q5TCX8 1036 aa12.02□□□□□ -0.49
NCBP3-203ENST00000574379 LHX8Q68G74 356 aa12.02□□□□□ -0.49
NCBP3-203ENST00000574379 B4GALNT3Q6L9W6 998 aa12.02□□□□□ -0.49
NCBP3-203ENST00000574379 CHD1LQ86WJ1 897 aa12.02□□□□□ -0.49
NCBP3-203ENST00000574379 CERS3Q8IU89 383 aa12.02□□□□□ -0.49
NCBP3-203ENST00000574379 NUDT12Q9BQG2 462 aa12.02□□□□□ -0.49
NCBP3-203ENST00000574379 RIOK1Q9BRS2 568 aaKnown RBP12.02□□□□□ -0.49
NCBP3-203ENST00000574379 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.02□□□□□ -0.49
NCBP3-203ENST00000574379 CWC22Q9HCG8 908 aaKnown RBP12.02□□□□□ -0.49
NCBP3-203ENST00000574379 GJD2Q9UKL4 321 aa12.02□□□□□ -0.49
NCBP3-203ENST00000574379 SLC45A1Q9Y2W3 748 aa12.02□□□□□ -0.49
NCBP3-203ENST00000574379 FLT1P17948 1338 aa12.02□□□□□ -0.49
NCBP3-203ENST00000574379 MAGEB6P1A0A0J9YX57 407 aa12.01□□□□□ -0.49
NCBP3-203ENST00000574379 GPR37L1O60883 481 aa12.01□□□□□ -0.49
NCBP3-203ENST00000574379 CHGBP05060 677 aa12.01□□□□□ -0.49
NCBP3-203ENST00000574379 MAP3K10Q02779 954 aa12.01□□□□□ -0.49
NCBP3-203ENST00000574379 UBE3CQ15386 1083 aa12.01□□□□□ -0.49
NCBP3-203ENST00000574379 NOL9Q5SY16 702 aaKnown RBP12.01□□□□□ -0.49
NCBP3-203ENST00000574379 MAPKAPK5Q8IW41 473 aa12.01□□□□□ -0.49
NCBP3-203ENST00000574379 ZSCAN29Q8IWY8 852 aaPredicted RBP12.01□□□□□ -0.49
NCBP3-203ENST00000574379 KBTBD3Q8NAB2 608 aa12.01□□□□□ -0.49
NCBP3-203ENST00000574379 TGFBRAP1Q8WUH2 860 aa12.01□□□□□ -0.49
NCBP3-203ENST00000574379 CXXC1Q9P0U4 656 aaPredicted RBP12.01□□□□□ -0.49
NCBP3-203ENST00000574379 ZNF112Q9UJU3 913 aa12.01□□□□□ -0.49
NCBP3-203ENST00000574379 AGTPBP1Q9UPW5 1226 aa12.01□□□□□ -0.49
NCBP3-203ENST00000574379 MUC6Q6W4X9 2439 aa12.01□□□□□ -0.49
NCBP3-203ENST00000574379 SLURP2P0DP57 97 aa12□□□□□ -0.49
NCBP3-203ENST00000574379 TRIM60Q495X7 471 aa12□□□□□ -0.49
NCBP3-203ENST00000574379 TREML2Q5T2D2 321 aa12□□□□□ -0.49
NCBP3-203ENST00000574379 ZSCAN25Q6NSZ9 544 aa12□□□□□ -0.49
NCBP3-203ENST00000574379 SH3RF1Q7Z6J0 888 aa12□□□□□ -0.49
NCBP3-203ENST00000574379 PTPRAP18433 802 aa11.99□□□□□ -0.49
NCBP3-203ENST00000574379 GCLCP48506 637 aaPredicted RBP11.99□□□□□ -0.49
NCBP3-203ENST00000574379 NHLH1Q02575 133 aa11.99□□□□□ -0.49
NCBP3-203ENST00000574379 CCL14Q16627 93 aa11.99□□□□□ -0.49
NCBP3-203ENST00000574379 GJC2Q5T442 439 aaPredicted RBP11.99□□□□□ -0.49
NCBP3-203ENST00000574379 PLEKHM2Q8IWE5 1019 aa11.99□□□□□ -0.49
NCBP3-203ENST00000574379 TRMT44Q8IYL2 757 aaKnown RBP11.99□□□□□ -0.49
NCBP3-203ENST00000574379 SCYL3Q8IZE3 742 aa11.99□□□□□ -0.49
NCBP3-203ENST00000574379 LCORLQ8N3X6 602 aa11.99□□□□□ -0.49
NCBP3-203ENST00000574379 SOCS4Q8WXH5 440 aa11.99□□□□□ -0.49
NCBP3-203ENST00000574379 C11orf16Q9NQ32 467 aa11.99□□□□□ -0.49
NCBP3-203ENST00000574379 PDLIM7Q9NR12 457 aa11.99□□□□□ -0.49
NCBP3-203ENST00000574379 AFG3L2Q9Y4W6 797 aa11.99□□□□□ -0.49
NCBP3-203ENST00000574379 XIRP2A4UGR9 3374 aa11.99□□□□□ -0.49
NCBP3-203ENST00000574379 LOC285556D6RIA3 1793 aa11.98□□□□□ -0.49
NCBP3-203ENST00000574379 TRIM43BA6NCK2 446 aa11.98□□□□□ -0.49
NCBP3-203ENST00000574379 PHF20L1A8MW92 1017 aa11.98□□□□□ -0.49
NCBP3-203ENST00000574379 DNM1LO00429 736 aa11.98□□□□□ -0.49
NCBP3-203ENST00000574379 TBC1D12O60347 775 aa11.98□□□□□ -0.49
NCBP3-203ENST00000574379 MBD4O95243 580 aa11.98□□□□□ -0.49
NCBP3-203ENST00000574379 PBX2P40425 430 aa11.98□□□□□ -0.49
NCBP3-203ENST00000574379 USP5P45974 858 aa11.98□□□□□ -0.49
NCBP3-203ENST00000574379 EPHB4P54760 987 aa11.98□□□□□ -0.49
NCBP3-203ENST00000574379 ADGRE1Q14246 886 aa11.98□□□□□ -0.49
NCBP3-203ENST00000574379 CSPP1Q1MSJ5 1256 aa11.98□□□□□ -0.49
NCBP3-203ENST00000574379 SLC39A5Q6ZMH5 540 aa11.98□□□□□ -0.49
NCBP3-203ENST00000574379 CCDC84Q86UT8 332 aaPredicted RBP11.98□□□□□ -0.49
NCBP3-203ENST00000574379 TRIM43Q96BQ3 446 aaPredicted RBP11.98□□□□□ -0.49
NCBP3-203ENST00000574379 CRNKL1Q9BZJ0 848 aaKnown RBP11.98□□□□□ -0.49
NCBP3-203ENST00000574379 DHX36Q9H2U1 1008 aaKnown RBP11.98□□□□□ -0.49
NCBP3-203ENST00000574379 OSBPL3Q9H4L5 887 aa11.98□□□□□ -0.49
NCBP3-203ENST00000574379 ARMT1Q9H993 441 aa11.98□□□□□ -0.49
NCBP3-203ENST00000574379 FAM196BA6NMK8 535 aa11.97□□□□□ -0.49
NCBP3-203ENST00000574379 GRXCR1A8MXD5 290 aa11.97□□□□□ -0.49
NCBP3-203ENST00000574379 KBTBD13C9JR72 458 aa11.97□□□□□ -0.49
NCBP3-203ENST00000574379 RNF113AO15541 343 aaKnown RBP11.97□□□□□ -0.49
NCBP3-203ENST00000574379 GABBR2O75899 941 aa11.97□□□□□ -0.49
NCBP3-203ENST00000574379 ZFYP08048 801 aaPredicted RBP11.97□□□□□ -0.49
NCBP3-203ENST00000574379 RAG1P15918 1043 aa11.97□□□□□ -0.49
NCBP3-203ENST00000574379 RGS2P41220 211 aa11.97□□□□□ -0.49
NCBP3-203ENST00000574379 FPGSQ05932 587 aa11.97□□□□□ -0.49
NCBP3-203ENST00000574379 METTL16Q86W50 562 aaKnown RBP11.97□□□□□ -0.49
NCBP3-203ENST00000574379 APPBP2Q92624 585 aa11.97□□□□□ -0.49
NCBP3-203ENST00000574379 PUS7LQ9H0K6 701 aaKnown RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms