RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 NAP1L4Q99733 375 aaKnown RBP4.28□□□□□ -1.72
HERPUD1-211ENST00000566550 PCGF6Q9BYE7 350 aa4.28□□□□□ -1.72
HERPUD1-211ENST00000566550 CCDC8Q9H0W5 538 aaPredicted RBP4.28□□□□□ -1.72
HERPUD1-211ENST00000566550 ANTXR1Q9H6X2 564 aa4.28□□□□□ -1.72
HERPUD1-211ENST00000566550 C7orf69Q9H7B7 122 aa4.28□□□□□ -1.72
HERPUD1-211ENST00000566550 CBX8Q9HC52 389 aa4.28□□□□□ -1.72
HERPUD1-211ENST00000566550 SEC31BQ9NQW1 1179 aa4.28□□□□□ -1.72
HERPUD1-211ENST00000566550 BSDC1Q9NW68 430 aaPredicted RBP4.28□□□□□ -1.72
HERPUD1-211ENST00000566550 SALL4Q9UJQ4 1053 aa4.28□□□□□ -1.72
HERPUD1-211ENST00000566550 INTUQ9ULD6 942 aa4.28□□□□□ -1.72
HERPUD1-211ENST00000566550 PCDHB10Q9UN67 800 aa4.28□□□□□ -1.72
HERPUD1-211ENST00000566550 A0A1W2PQH9 124 aa4.27□□□□□ -1.73
HERPUD1-211ENST00000566550 GSG1L2A8MUP6 293 aa4.27□□□□□ -1.73
HERPUD1-211ENST00000566550 SART1O43290 800 aaKnown RBP4.27□□□□□ -1.73
HERPUD1-211ENST00000566550 NRDCO43847 1150 aa4.27□□□□□ -1.73
HERPUD1-211ENST00000566550 MMP20O60882 483 aa4.27□□□□□ -1.73
HERPUD1-211ENST00000566550 ADAMTS4O75173 837 aa4.27□□□□□ -1.73
HERPUD1-211ENST00000566550 KIF4AO95239 1232 aa4.27□□□□□ -1.73
HERPUD1-211ENST00000566550 C8AP07357 584 aa4.27□□□□□ -1.73
HERPUD1-211ENST00000566550 PSAPP07602 524 aa4.27□□□□□ -1.73
HERPUD1-211ENST00000566550 TARSP26639 723 aaKnown RBP4.27□□□□□ -1.73
HERPUD1-211ENST00000566550 CASP7P55210 303 aa4.27□□□□□ -1.73
HERPUD1-211ENST00000566550 RPS26P62854 115 aaKnown RBP4.27□□□□□ -1.73
HERPUD1-211ENST00000566550 PLAURQ03405 335 aa4.27□□□□□ -1.73
HERPUD1-211ENST00000566550 PIN1Q13526 163 aaPredicted RBP4.27□□□□□ -1.73
HERPUD1-211ENST00000566550 MTMR1Q13613 665 aa4.27□□□□□ -1.73
HERPUD1-211ENST00000566550 MLC1Q15049 377 aa4.27□□□□□ -1.73
HERPUD1-211ENST00000566550 RASIP1Q5U651 963 aa4.27□□□□□ -1.73
HERPUD1-211ENST00000566550 HGSNATQ68CP4 663 aa4.27□□□□□ -1.73
HERPUD1-211ENST00000566550 VHLLQ6RSH7 139 aa4.27□□□□□ -1.73
HERPUD1-211ENST00000566550 HFE2Q6ZVN8 426 aa4.27□□□□□ -1.73
HERPUD1-211ENST00000566550 STRA8Q7Z7C7 330 aa4.27□□□□□ -1.73
HERPUD1-211ENST00000566550 CCNJLQ8IV13 435 aa4.27□□□□□ -1.73
HERPUD1-211ENST00000566550 AGGF1Q8N302 714 aaeCLIP4.27□□□□□ -1.73
HERPUD1-211ENST00000566550 PAF1Q8N7H5 531 aa4.27□□□□□ -1.73
HERPUD1-211ENST00000566550 TTC8Q8TAM2 541 aa4.27□□□□□ -1.73
HERPUD1-211ENST00000566550 HOOK2Q96ED9 719 aa4.27□□□□□ -1.73
HERPUD1-211ENST00000566550 HHIPQ96QV1 700 aa4.27□□□□□ -1.73
HERPUD1-211ENST00000566550 SLC26A8Q96RN1 970 aa4.27□□□□□ -1.73
HERPUD1-211ENST00000566550 UBL7Q96S82 380 aaPredicted RBP4.27□□□□□ -1.73
HERPUD1-211ENST00000566550 CDC6Q99741 560 aa4.27□□□□□ -1.73
HERPUD1-211ENST00000566550 YIPF4Q9BSR8 244 aa4.27□□□□□ -1.73
HERPUD1-211ENST00000566550 MAF1Q9H063 256 aa4.27□□□□□ -1.73
HERPUD1-211ENST00000566550 PPCSQ9HAB8 311 aa4.27□□□□□ -1.73
HERPUD1-211ENST00000566550 TLR7Q9NYK1 1049 aaKnown RBP4.27□□□□□ -1.73
HERPUD1-211ENST00000566550 LOC102724428A0A0B4J2F2 783 aa4.26□□□□□ -1.73
HERPUD1-211ENST00000566550 FAM221AA4D161 298 aa4.26□□□□□ -1.73
HERPUD1-211ENST00000566550 FAM177BA6PVY3 158 aa4.26□□□□□ -1.73
HERPUD1-211ENST00000566550 UPK3BL1B0FP48 263 aa4.26□□□□□ -1.73
HERPUD1-211ENST00000566550 UPK3BL2E5RIL1 263 aa4.26□□□□□ -1.73
HERPUD1-211ENST00000566550 IFRD1O00458 451 aaPredicted RBP4.26□□□□□ -1.73
HERPUD1-211ENST00000566550 ADCY3O60266 1144 aa4.26□□□□□ -1.73
HERPUD1-211ENST00000566550 SUSD5O60279 629 aa4.26□□□□□ -1.73
HERPUD1-211ENST00000566550 CILPO75339 1184 aa4.26□□□□□ -1.73
HERPUD1-211ENST00000566550 IFIT2P09913 472 aaKnown RBP4.26□□□□□ -1.73
HERPUD1-211ENST00000566550 CPEP16870 476 aa4.26□□□□□ -1.73
HERPUD1-211ENST00000566550 JUNBP17275 347 aaPredicted RBP4.26□□□□□ -1.73
HERPUD1-211ENST00000566550 GUCY2CP25092 1073 aa4.26□□□□□ -1.73
HERPUD1-211ENST00000566550 CCNFP41002 786 aa4.26□□□□□ -1.73
HERPUD1-211ENST00000566550 SIK1P57059 783 aa4.26□□□□□ -1.73
HERPUD1-211ENST00000566550 FAAP100Q0VG06 881 aa4.26□□□□□ -1.73
HERPUD1-211ENST00000566550 SETDB1Q15047 1291 aa4.26□□□□□ -1.73
HERPUD1-211ENST00000566550 SLC10A6Q3KNW5 377 aa4.26□□□□□ -1.73
HERPUD1-211ENST00000566550 AKAP4Q5JQC9 854 aa4.26□□□□□ -1.73
HERPUD1-211ENST00000566550 FOXB2Q5VYV0 432 aa4.26□□□□□ -1.73
HERPUD1-211ENST00000566550 FAM117BQ6P1L5 589 aa4.26□□□□□ -1.73
HERPUD1-211ENST00000566550 LHFPL2Q6ZUX7 228 aa4.26□□□□□ -1.73
HERPUD1-211ENST00000566550 ACAD11Q709F0 780 aa4.26□□□□□ -1.73
HERPUD1-211ENST00000566550 FAM9BQ8IZU0 186 aa4.26□□□□□ -1.73
HERPUD1-211ENST00000566550 REXO1Q8N1G1 1221 aaKnown RBP4.26□□□□□ -1.73
HERPUD1-211ENST00000566550 LRRC47Q8N1G4 583 aaKnown RBP4.26□□□□□ -1.73
HERPUD1-211ENST00000566550 AFAP1L2Q8N4X5 818 aa4.26□□□□□ -1.73
HERPUD1-211ENST00000566550 ZBTB38Q8NAP3 1195 aaPredicted RBP4.26□□□□□ -1.73
HERPUD1-211ENST00000566550 WDR66Q8TBY9 1149 aa4.26□□□□□ -1.73
HERPUD1-211ENST00000566550 FBXL18Q96ME1 805 aa4.26□□□□□ -1.73
HERPUD1-211ENST00000566550 IPO9Q96P70 1041 aaKnown RBP4.26□□□□□ -1.73
HERPUD1-211ENST00000566550 KRTAP4-2Q9BYR5 136 aa4.26□□□□□ -1.73
HERPUD1-211ENST00000566550 ZFYVE1Q9HBF4 777 aa4.26□□□□□ -1.73
HERPUD1-211ENST00000566550 NCOA5Q9HCD5 579 aaKnown RBP4.26□□□□□ -1.73
HERPUD1-211ENST00000566550 ATG3Q9NT62 314 aa4.26□□□□□ -1.73
HERPUD1-211ENST00000566550 SLC5A4Q9NY91 659 aa4.26□□□□□ -1.73
HERPUD1-211ENST00000566550 ZFATQ9P243 1243 aa4.26□□□□□ -1.73
HERPUD1-211ENST00000566550 ZNF180Q9UJW8 692 aa4.26□□□□□ -1.73
HERPUD1-211ENST00000566550 MAPRE3Q9UPY8 281 aa4.26□□□□□ -1.73
HERPUD1-211ENST00000566550 PRR19A6NJB7 356 aa4.25□□□□□ -1.73
HERPUD1-211ENST00000566550 PRPF3O43395 683 aaKnown RBP4.25□□□□□ -1.73
HERPUD1-211ENST00000566550 CT47B1P0C2W7 299 aaPredicted RBP4.25□□□□□ -1.73
HERPUD1-211ENST00000566550 SDSP20132 328 aa4.25□□□□□ -1.73
HERPUD1-211ENST00000566550 CD68P34810 354 aaPredicted RBP4.25□□□□□ -1.73
HERPUD1-211ENST00000566550 TMPRSS15P98073 1019 aa4.25□□□□□ -1.73
HERPUD1-211ENST00000566550 FAM209AQ5JX71 171 aa4.25□□□□□ -1.73
HERPUD1-211ENST00000566550 COL13A1Q5TAT6 717 aaPredicted RBP4.25□□□□□ -1.73
HERPUD1-211ENST00000566550 KIAA1211LQ6NV74 962 aa4.25□□□□□ -1.73
HERPUD1-211ENST00000566550 DDX46Q7L014 1031 aaKnown RBP4.25□□□□□ -1.73
HERPUD1-211ENST00000566550 CCDC84Q86UT8 332 aaPredicted RBP4.25□□□□□ -1.73
HERPUD1-211ENST00000566550 LRRTM3Q86VH5 581 aa4.25□□□□□ -1.73
HERPUD1-211ENST00000566550 ARMC10Q8N2F6 343 aa4.25□□□□□ -1.73
HERPUD1-211ENST00000566550 TMTC2Q8N394 836 aa4.25□□□□□ -1.73
HERPUD1-211ENST00000566550 NME8Q8N427 588 aa4.25□□□□□ -1.73
HERPUD1-211ENST00000566550 C19orf47Q8N9M1 422 aaKnown RBP4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms