RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 GTF2IP78347 998 aa11.24□□□□□ -0.61
SMG1-205ENST00000561947 FLAD1Q8NFF5 587 aa11.24□□□□□ -0.61
SMG1-205ENST00000561947 RIMBP2O15034 1052 aa11.24□□□□□ -0.61
SMG1-205ENST00000561947 CDK8P49336 464 aa11.24□□□□□ -0.61
SMG1-205ENST00000561947 GNAQP50148 359 aa11.24□□□□□ -0.61
SMG1-205ENST00000561947 NLRP5P59047 1200 aa11.24□□□□□ -0.61
SMG1-205ENST00000561947 NOLC1Q14978 699 aaKnown RBP eCLIP11.24□□□□□ -0.61
SMG1-205ENST00000561947 ZNF772Q68DY9 489 aaPredicted RBP11.24□□□□□ -0.61
SMG1-205ENST00000561947 KIAA1524Q8TCG1 905 aa11.24□□□□□ -0.61
SMG1-205ENST00000561947 NRBP1Q9UHY1 535 aa11.24□□□□□ -0.61
SMG1-205ENST00000561947 HOOK1Q9UJC3 728 aaKnown RBP11.24□□□□□ -0.61
SMG1-205ENST00000561947 SUGT1Q9Y2Z0 365 aa11.24□□□□□ -0.61
SMG1-205ENST00000561947 DAGLAQ9Y4D2 1042 aa11.24□□□□□ -0.61
SMG1-205ENST00000561947 PDE6BP35913 854 aa11.23□□□□□ -0.61
SMG1-205ENST00000561947 TMEM47Q9BQJ4 181 aa11.23□□□□□ -0.61
SMG1-205ENST00000561947 CSRNP2Q9H175 543 aa11.23□□□□□ -0.61
SMG1-205ENST00000561947 SPTLC3Q9NUV7 552 aa11.23□□□□□ -0.61
SMG1-205ENST00000561947 MAD2L2Q9UI95 211 aa11.23□□□□□ -0.61
SMG1-205ENST00000561947 PYCARDQ9ULZ3 195 aa11.23□□□□□ -0.61
SMG1-205ENST00000561947 SMTNL1A8MU46 457 aa11.23□□□□□ -0.61
SMG1-205ENST00000561947 ALDH1B1P30837 517 aa11.23□□□□□ -0.61
SMG1-205ENST00000561947 TPM4P67936 248 aa11.23□□□□□ -0.61
SMG1-205ENST00000561947 MDM2Q00987 491 aaPredicted RBP11.23□□□□□ -0.61
SMG1-205ENST00000561947 NOM1Q5C9Z4 860 aaKnown RBP11.23□□□□□ -0.61
SMG1-205ENST00000561947 TTC38Q5R3I4 469 aa11.23□□□□□ -0.61
SMG1-205ENST00000561947 STAG2Q8N3U4 1231 aa11.23□□□□□ -0.61
SMG1-205ENST00000561947 NEDD1Q8NHV4 660 aa11.23□□□□□ -0.61
SMG1-205ENST00000561947 EYA3Q99504 573 aa11.23□□□□□ -0.61
SMG1-205ENST00000561947 ZC3H12CQ9C0D7 883 aaKnown RBP11.23□□□□□ -0.61
SMG1-205ENST00000561947 SH3GLB2Q9NR46 395 aa11.23□□□□□ -0.61
SMG1-205ENST00000561947 TNS1Q9HBL0 1735 aaKnown RBP11.23□□□□□ -0.61
SMG1-205ENST00000561947 MYH8P13535 1937 aa11.23□□□□□ -0.61
SMG1-205ENST00000561947 WNT7AO00755 349 aa11.22□□□□□ -0.61
SMG1-205ENST00000561947 IKBKBO14920 756 aa11.22□□□□□ -0.61
SMG1-205ENST00000561947 POLR2DO15514 142 aaKnown RBP11.22□□□□□ -0.61
SMG1-205ENST00000561947 MMP10P09238 476 aa11.22□□□□□ -0.61
SMG1-205ENST00000561947 VEGFAP15692 232 aaPredicted RBP11.22□□□□□ -0.61
SMG1-205ENST00000561947 CALML3P27482 149 aa11.22□□□□□ -0.61
SMG1-205ENST00000561947 TRAPPC10P48553 1259 aa11.22□□□□□ -0.61
SMG1-205ENST00000561947 NCAPHQ15003 741 aa11.22□□□□□ -0.61
SMG1-205ENST00000561947 C17orf53Q8N3J3 647 aaPredicted RBP11.22□□□□□ -0.61
SMG1-205ENST00000561947 FERMT2Q96AC1 680 aa11.22□□□□□ -0.61
SMG1-205ENST00000561947 SERTAD1Q9UHV2 236 aa11.22□□□□□ -0.61
SMG1-205ENST00000561947 STX8Q9UNK0 236 aa11.22□□□□□ -0.61
SMG1-205ENST00000561947 PARP3Q9Y6F1 533 aa11.22□□□□□ -0.61
SMG1-205ENST00000561947 CCDC144BQ3MJ40 725 aa11.22□□□□□ -0.61
SMG1-205ENST00000561947 ISM2Q6H9L7 571 aa11.22□□□□□ -0.61
SMG1-205ENST00000561947 DPP8Q6V1X1 898 aaPredicted RBP11.22□□□□□ -0.61
SMG1-205ENST00000561947 FOXP4Q8IVH2 680 aaPredicted RBP11.22□□□□□ -0.61
SMG1-205ENST00000561947 MASTLQ96GX5 879 aa11.22□□□□□ -0.61
SMG1-205ENST00000561947 PCDHA5Q9Y5H7 936 aa11.22□□□□□ -0.61
SMG1-205ENST00000561947 RGPD3A6NKT7 1758 aaPredicted RBP11.22□□□□□ -0.61
SMG1-205ENST00000561947 RGPD4Q7Z3J3 1758 aa11.22□□□□□ -0.61
SMG1-205ENST00000561947 PALM3A6NDB9 673 aaPredicted RBP11.22□□□□□ -0.61
SMG1-205ENST00000561947 FOXN1O15353 648 aa11.22□□□□□ -0.61
SMG1-205ENST00000561947 TERF1P54274 439 aa11.22□□□□□ -0.61
SMG1-205ENST00000561947 ATP2C1P98194 919 aaPredicted RBP11.22□□□□□ -0.61
SMG1-205ENST00000561947 POSTNQ15063 836 aa11.22□□□□□ -0.61
SMG1-205ENST00000561947 ZNF174Q15697 407 aa11.22□□□□□ -0.61
SMG1-205ENST00000561947 KANK3Q6NY19 840 aa11.22□□□□□ -0.61
SMG1-205ENST00000561947 OLFM4Q6UX06 510 aa11.22□□□□□ -0.61
SMG1-205ENST00000561947 USP49Q70CQ1 688 aa11.22□□□□□ -0.61
SMG1-205ENST00000561947 LZTS2Q9BRK4 669 aa11.22□□□□□ -0.61
SMG1-205ENST00000561947 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.22□□□□□ -0.61
SMG1-205ENST00000561947 R3HCC1Q9Y3T6 440 aaKnown RBP11.22□□□□□ -0.61
SMG1-205ENST00000561947 ACTN4O43707 911 aaKnown RBP11.21□□□□□ -0.61
SMG1-205ENST00000561947 SLC35G1Q2M3R5 365 aa11.21□□□□□ -0.61
SMG1-205ENST00000561947 PIK3AP1Q6ZUJ8 805 aa11.21□□□□□ -0.61
SMG1-205ENST00000561947 BLIDQ8IZY5 108 aa11.21□□□□□ -0.61
SMG1-205ENST00000561947 CERS5Q8N5B7 392 aa11.21□□□□□ -0.61
SMG1-205ENST00000561947 GPKOWQ92917 476 aaPredicted RBP eCLIP11.21□□□□□ -0.61
SMG1-205ENST00000561947 ADAMTSL1Q8N6G6 1762 aa11.21□□□□□ -0.62
SMG1-205ENST00000561947 ADAMTS3O15072 1205 aa11.21□□□□□ -0.62
SMG1-205ENST00000561947 LRMPQ12912 555 aa11.21□□□□□ -0.62
SMG1-205ENST00000561947 NT5DC1Q5TFE4 455 aa11.21□□□□□ -0.62
SMG1-205ENST00000561947 TMX4Q9H1E5 349 aaPredicted RBP11.21□□□□□ -0.62
SMG1-205ENST00000561947 MAN1B1Q9UKM7 699 aa11.21□□□□□ -0.62
SMG1-205ENST00000561947 PCDHA4Q9UN74 947 aa11.21□□□□□ -0.62
SMG1-205ENST00000561947 F8W031 263 aaPredicted RBP11.2□□□□□ -0.62
SMG1-205ENST00000561947 CYTH3O43739 400 aa11.2□□□□□ -0.62
SMG1-205ENST00000561947 TPM2P07951 284 aa11.2□□□□□ -0.62
SMG1-205ENST00000561947 PRR29P0C7W0 189 aa11.2□□□□□ -0.62
SMG1-205ENST00000561947 NOVP48745 357 aa11.2□□□□□ -0.62
SMG1-205ENST00000561947 PTGDRQ13258 359 aa11.2□□□□□ -0.62
SMG1-205ENST00000561947 DOK7Q18PE1 504 aa11.2□□□□□ -0.62
SMG1-205ENST00000561947 PDILTQ8N807 584 aa11.2□□□□□ -0.62
SMG1-205ENST00000561947 CCDC148Q8NFR7 591 aa11.2□□□□□ -0.62
SMG1-205ENST00000561947 CACTINQ8WUQ7 758 aaKnown RBP11.2□□□□□ -0.62
SMG1-205ENST00000561947 TTF2Q9UNY4 1162 aaKnown RBP11.2□□□□□ -0.62
SMG1-205ENST00000561947 PLIN4Q96Q06 1357 aa11.2□□□□□ -0.62
SMG1-205ENST00000561947 TOP1P11387 765 aaKnown RBP11.2□□□□□ -0.62
SMG1-205ENST00000561947 SARSP49591 514 aaKnown RBP11.2□□□□□ -0.62
SMG1-205ENST00000561947 MYL5Q02045 173 aa11.2□□□□□ -0.62
SMG1-205ENST00000561947 WWC2Q6AWC2 1192 aa11.2□□□□□ -0.62
SMG1-205ENST00000561947 TYW1BQ6NUM6 668 aa11.2□□□□□ -0.62
SMG1-205ENST00000561947 FAM177A1Q8N128 213 aaPredicted RBP11.2□□□□□ -0.62
SMG1-205ENST00000561947 DAGLBQ8NCG7 672 aa11.2□□□□□ -0.62
SMG1-205ENST00000561947 SYMPKQ92797 1274 aaKnown RBP11.2□□□□□ -0.62
SMG1-205ENST00000561947 SMARCE1Q969G3 411 aa11.2□□□□□ -0.62
SMG1-205ENST00000561947 SPZ1Q9BXG8 430 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms