RNA–Protein interactions for RNA: ENST00000530404.5

TSPAN4-219, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-219ENST00000530404 CLEC10AQ8IUN9 316 aa25.09■■□□□ 1.61
TSPAN4-219ENST00000530404 LRCH3Q96II8 777 aa25.09■■□□□ 1.61
TSPAN4-219ENST00000530404 PAG1Q9NWQ8 432 aa25.09■■□□□ 1.61
TSPAN4-219ENST00000530404 LAMA2P24043 3122 aaKnown RBP25.09■■□□□ 1.61
TSPAN4-219ENST00000530404 SMCHD1A6NHR9 2005 aa25.08■■□□□ 1.61
TSPAN4-219ENST00000530404 MBD4O95243 580 aa25.08■■□□□ 1.61
TSPAN4-219ENST00000530404 PTPREP23469 700 aa25.08■■□□□ 1.61
TSPAN4-219ENST00000530404 KIAA1755Q5JYT7 1200 aa25.08■■□□□ 1.61
TSPAN4-219ENST00000530404 LBX2Q6XYB7 198 aa25.08■■□□□ 1.61
TSPAN4-219ENST00000530404 NPLOC4Q8TAT6 608 aa25.08■■□□□ 1.61
TSPAN4-219ENST00000530404 RAB11FIP3O75154 756 aa25.07■■□□□ 1.6
TSPAN4-219ENST00000530404 GLRX3O76003 335 aaKnown RBP25.07■■□□□ 1.6
TSPAN4-219ENST00000530404 ADD2P35612 726 aa25.07■■□□□ 1.6
TSPAN4-219ENST00000530404 GDF15Q99988 308 aa25.07■■□□□ 1.6
TSPAN4-219ENST00000530404 TANGO6Q9C0B7 1094 aa25.07■■□□□ 1.6
TSPAN4-219ENST00000530404 MYH4Q9Y623 1939 aa25.07■■□□□ 1.6
TSPAN4-219ENST00000530404 CYP2D7A0A087X1C5 515 aa25.06■■□□□ 1.6
TSPAN4-219ENST00000530404 A0A1W2PPC1 479 aa25.06■■□□□ 1.6
TSPAN4-219ENST00000530404 SLC15A5A6NIM6 579 aa25.06■■□□□ 1.6
TSPAN4-219ENST00000530404 IVNS1ABPQ9Y6Y0 642 aa25.06■■□□□ 1.6
TSPAN4-219ENST00000530404 AKR1B1P15121 316 aa25.05■■□□□ 1.6
TSPAN4-219ENST00000530404 GRB14Q14449 540 aa25.05■■□□□ 1.6
TSPAN4-219ENST00000530404 GREB1LQ9C091 1923 aaPredicted RBP25.04■■□□□ 1.6
TSPAN4-219ENST00000530404 SMARCA5O60264 1052 aaPredicted RBP25.04■■□□□ 1.6
TSPAN4-219ENST00000530404 COL6A1P12109 1028 aa25.04■■□□□ 1.6
TSPAN4-219ENST00000530404 ATP5JP18859 108 aa25.04■■□□□ 1.6
TSPAN4-219ENST00000530404 MAGEA10P43363 369 aaPredicted RBP25.04■■□□□ 1.6
TSPAN4-219ENST00000530404 LRRC26Q2I0M4 334 aa25.04■■□□□ 1.6
TSPAN4-219ENST00000530404 MFSD14CQ5VZR4 134 aa25.04■■□□□ 1.6
TSPAN4-219ENST00000530404 TMEM179Q6ZVK1 233 aa25.04■■□□□ 1.6
TSPAN4-219ENST00000530404 CNGA1P29973 690 aa25.03■■□□□ 1.6
TSPAN4-219ENST00000530404 CYP2C19P33261 490 aa25.03■■□□□ 1.6
TSPAN4-219ENST00000530404 ATP2B2Q01814 1243 aa25.03■■□□□ 1.6
TSPAN4-219ENST00000530404 COG2Q14746 738 aa25.03■■□□□ 1.6
TSPAN4-219ENST00000530404 C20orf194Q5TEA3 1177 aa25.03■■□□□ 1.6
TSPAN4-219ENST00000530404 SAMD1Q6SPF0 538 aaPredicted RBP25.03■■□□□ 1.6
TSPAN4-219ENST00000530404 SPICE1Q8N0Z3 855 aa25.03■■□□□ 1.6
TSPAN4-219ENST00000530404 HAUS7Q99871 368 aa25.03■■□□□ 1.6
TSPAN4-219ENST00000530404 MOV10L1Q9BXT6 1211 aaKnown RBP25.03■■□□□ 1.6
TSPAN4-219ENST00000530404 SWAP70Q9UH65 585 aa25.03■■□□□ 1.6
TSPAN4-219ENST00000530404 BMP8BP34820 402 aa25.02■■□□□ 1.6
TSPAN4-219ENST00000530404 SIAH1Q8IUQ4 282 aa25.02■■□□□ 1.6
TSPAN4-219ENST00000530404 TRPV1Q8NER1 839 aa25.02■■□□□ 1.6
TSPAN4-219ENST00000530404 ATP8A2Q9NTI2 1148 aa25.02■■□□□ 1.6
TSPAN4-219ENST00000530404 RCAN3Q9UKA8 241 aa25.02■■□□□ 1.6
TSPAN4-219ENST00000530404 LTBP2Q14767 1821 aa25.01■■□□□ 1.59
TSPAN4-219ENST00000530404 ICA1Q05084 483 aa25.01■■□□□ 1.59
TSPAN4-219ENST00000530404 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.01■■□□□ 1.59
TSPAN4-219ENST00000530404 SPATC1LQ9H0A9 340 aa25.01■■□□□ 1.59
TSPAN4-219ENST00000530404 HOXC6P09630 235 aa25■■□□□ 1.59
TSPAN4-219ENST00000530404 ADORA2AP29274 412 aa25■■□□□ 1.59
TSPAN4-219ENST00000530404 CDK8P49336 464 aa25■■□□□ 1.59
TSPAN4-219ENST00000530404 PLS1Q14651 629 aa25■■□□□ 1.59
TSPAN4-219ENST00000530404 C12orf60Q5U649 245 aa25■■□□□ 1.59
TSPAN4-219ENST00000530404 DPP9Q86TI2 863 aa25■■□□□ 1.59
TSPAN4-219ENST00000530404 ATG4CQ96DT6 458 aa25■■□□□ 1.59
TSPAN4-219ENST00000530404 ARHGEF10LQ9HCE6 1279 aa25■■□□□ 1.59
TSPAN4-219ENST00000530404 HOXC10Q9NYD6 342 aa25■■□□□ 1.59
TSPAN4-219ENST00000530404 DDX20Q9UHI6 824 aaKnown RBP25■■□□□ 1.59
TSPAN4-219ENST00000530404 USP17L12C9JPN9 530 aa24.99■■□□□ 1.59
TSPAN4-219ENST00000530404 USP17L21D6R901 530 aa24.99■■□□□ 1.59
TSPAN4-219ENST00000530404 ERCC3P19447 782 aa24.99■■□□□ 1.59
TSPAN4-219ENST00000530404 DSG3P32926 999 aa24.99■■□□□ 1.59
TSPAN4-219ENST00000530404 SENP6Q9GZR1 1112 aaPredicted RBP24.99■■□□□ 1.59
TSPAN4-219ENST00000530404 SLC4A4Q9Y6R1 1079 aa24.99■■□□□ 1.59
TSPAN4-219ENST00000530404 FLOT1O75955 427 aa24.98■■□□□ 1.59
TSPAN4-219ENST00000530404 ANO1Q5XXA6 986 aa24.98■■□□□ 1.59
TSPAN4-219ENST00000530404 LRRCC1Q9C099 1032 aa24.98■■□□□ 1.59
TSPAN4-219ENST00000530404 PUS7LQ9H0K6 701 aaKnown RBP24.98■■□□□ 1.59
TSPAN4-219ENST00000530404 VCPKMTQ9H867 229 aa24.98■■□□□ 1.59
TSPAN4-219ENST00000530404 TMX2Q9Y320 296 aa24.98■■□□□ 1.59
TSPAN4-219ENST00000530404 COBLO75128 1261 aa24.97■■□□□ 1.59
TSPAN4-219ENST00000530404 CYBAP13498 195 aa24.97■■□□□ 1.59
TSPAN4-219ENST00000530404 UBE3CQ15386 1083 aa24.97■■□□□ 1.59
TSPAN4-219ENST00000530404 C16orf86Q6ZW13 317 aa24.97■■□□□ 1.59
TSPAN4-219ENST00000530404 NCAPG2Q86XI2 1143 aa24.97■■□□□ 1.59
TSPAN4-219ENST00000530404 UBE2OQ9C0C9 1292 aaKnown RBP24.97■■□□□ 1.59
TSPAN4-219ENST00000530404 ATN1P54259 1190 aaPredicted RBP24.96■■□□□ 1.59
TSPAN4-219ENST00000530404 MDM2Q00987 491 aaPredicted RBP24.96■■□□□ 1.59
TSPAN4-219ENST00000530404 AMOTL1Q8IY63 956 aa24.96■■□□□ 1.59
TSPAN4-219ENST00000530404 LPAR1Q92633 364 aa24.96■■□□□ 1.59
TSPAN4-219ENST00000530404 CHMP4BQ9H444 224 aaKnown RBP24.96■■□□□ 1.59
TSPAN4-219ENST00000530404 MCM3APO60318 1980 aa24.96■■□□□ 1.59
TSPAN4-219ENST00000530404 IGHA2P01877 340 aa24.95■■□□□ 1.58
TSPAN4-219ENST00000530404 EEF2P13639 858 aaKnown RBP24.95■■□□□ 1.58
TSPAN4-219ENST00000530404 CTR9Q6PD62 1173 aa24.95■■□□□ 1.58
TSPAN4-219ENST00000530404 TDHQ8IZJ6 230 aa24.95■■□□□ 1.58
TSPAN4-219ENST00000530404 STK11IPQ8N1F8 1099 aa24.95■■□□□ 1.58
TSPAN4-219ENST00000530404 SHCBP1Q8NEM2 672 aa24.95■■□□□ 1.58
TSPAN4-219ENST00000530404 SH2D4AQ9H788 454 aa24.95■■□□□ 1.58
TSPAN4-219ENST00000530404 STRNO43815 780 aa24.94■■□□□ 1.58
TSPAN4-219ENST00000530404 PRAMEF19Q5SWL8 479 aa24.94■■□□□ 1.58
TSPAN4-219ENST00000530404 GJC2Q5T442 439 aaPredicted RBP24.94■■□□□ 1.58
TSPAN4-219ENST00000530404 DDRGK1Q96HY6 314 aa24.94■■□□□ 1.58
TSPAN4-219ENST00000530404 CCDC17Q96LX7 622 aa24.94■■□□□ 1.58
TSPAN4-219ENST00000530404 FBXO28Q9NVF7 368 aa24.94■■□□□ 1.58
TSPAN4-219ENST00000530404 WDR46O15213 610 aaKnown RBP24.93■■□□□ 1.58
TSPAN4-219ENST00000530404 RAD21O60216 631 aa24.93■■□□□ 1.58
TSPAN4-219ENST00000530404 MSCO60682 206 aa24.93■■□□□ 1.58
TSPAN4-219ENST00000530404 TMEM132BQ14DG7 1078 aa24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms