RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 ABCC3O15438 1527 aa18.34■□□□□ 0.53
PCDHA1-203ENST00000504120 LACTBP83111 547 aaPredicted RBP18.34■□□□□ 0.53
PCDHA1-203ENST00000504120 RPS6KA1Q15418 735 aa18.34■□□□□ 0.53
PCDHA1-203ENST00000504120 ZBTB9Q96C00 473 aa18.34■□□□□ 0.53
PCDHA1-203ENST00000504120 TPCN1Q9ULQ1 816 aa18.34■□□□□ 0.53
PCDHA1-203ENST00000504120 MTMR6Q9Y217 621 aa18.34■□□□□ 0.53
PCDHA1-203ENST00000504120 KCNQ3O43525 872 aa18.33■□□□□ 0.53
PCDHA1-203ENST00000504120 CFBP00751 764 aa18.33■□□□□ 0.53
PCDHA1-203ENST00000504120 PDE6AP16499 860 aa18.33■□□□□ 0.53
PCDHA1-203ENST00000504120 TAF12Q16514 161 aa18.33■□□□□ 0.53
PCDHA1-203ENST00000504120 FANCBQ8NB91 859 aa18.33■□□□□ 0.53
PCDHA1-203ENST00000504120 ARHGAP31Q2M1Z3 1444 aa18.33■□□□□ 0.53
PCDHA1-203ENST00000504120 BLIDQ8IZY5 108 aa18.33■□□□□ 0.53
PCDHA1-203ENST00000504120 C17orf53Q8N3J3 647 aaPredicted RBP18.33■□□□□ 0.53
PCDHA1-203ENST00000504120 RPGRIP1Q96KN7 1286 aa18.33■□□□□ 0.53
PCDHA1-203ENST00000504120 CMA1P23946 247 aa18.33■□□□□ 0.52
PCDHA1-203ENST00000504120 UAP1Q16222 522 aaPredicted RBP18.33■□□□□ 0.52
PCDHA1-203ENST00000504120 TRIML1Q8N9V2 468 aa18.33■□□□□ 0.52
PCDHA1-203ENST00000504120 STAMQ92783 540 aa18.33■□□□□ 0.52
PCDHA1-203ENST00000504120 DDX39AO00148 427 aaKnown RBP18.33■□□□□ 0.52
PCDHA1-203ENST00000504120 PSMC4P43686 418 aa18.33■□□□□ 0.52
PCDHA1-203ENST00000504120 CCDC110Q8TBZ0 833 aa18.33■□□□□ 0.52
PCDHA1-203ENST00000504120 USP28Q96RU2 1077 aa18.33■□□□□ 0.52
PCDHA1-203ENST00000504120 RGS12O14924 1447 aa18.32■□□□□ 0.52
PCDHA1-203ENST00000504120 FAM98CQ17RN3 349 aaKnown RBP18.32■□□□□ 0.52
PCDHA1-203ENST00000504120 AZI2Q9H6S1 392 aa18.32■□□□□ 0.52
PCDHA1-203ENST00000504120 NDUFAB1O14561 156 aa18.32■□□□□ 0.52
PCDHA1-203ENST00000504120 MAEAQ7L5Y9 396 aa18.32■□□□□ 0.52
PCDHA1-203ENST00000504120 IFIH1Q9BYX4 1025 aaKnown RBP18.32■□□□□ 0.52
PCDHA1-203ENST00000504120 FYB2Q5VWT5 728 aa18.32■□□□□ 0.52
PCDHA1-203ENST00000504120 GALNT17Q6IS24 598 aa18.32■□□□□ 0.52
PCDHA1-203ENST00000504120 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.32■□□□□ 0.52
PCDHA1-203ENST00000504120 SLAIN2Q9P270 581 aa18.32■□□□□ 0.52
PCDHA1-203ENST00000504120 STAP2Q9UGK3 403 aa18.32■□□□□ 0.52
PCDHA1-203ENST00000504120 PALD1Q9ULE6 856 aa18.32■□□□□ 0.52
PCDHA1-203ENST00000504120 GOLGA6BA6NDN3 693 aa18.32■□□□□ 0.52
PCDHA1-203ENST00000504120 ERCC6L2Q5T890 1561 aa18.31■□□□□ 0.52
PCDHA1-203ENST00000504120 TCP10Q12799 353 aa18.31■□□□□ 0.52
PCDHA1-203ENST00000504120 GRM1Q13255 1194 aa18.31■□□□□ 0.52
PCDHA1-203ENST00000504120 PEX26Q7Z412 305 aa18.31■□□□□ 0.52
PCDHA1-203ENST00000504120 DAAM2Q86T65 1068 aa18.31■□□□□ 0.52
PCDHA1-203ENST00000504120 CCDC117Q8IWD4 279 aaPredicted RBP18.31■□□□□ 0.52
PCDHA1-203ENST00000504120 IWS1Q96ST2 819 aa18.31■□□□□ 0.52
PCDHA1-203ENST00000504120 BIN2Q9UBW5 565 aaPredicted RBP18.31■□□□□ 0.52
PCDHA1-203ENST00000504120 STK10O94804 968 aaKnown RBP18.31■□□□□ 0.52
PCDHA1-203ENST00000504120 LONRF3Q496Y0 759 aa18.31■□□□□ 0.52
PCDHA1-203ENST00000504120 RRAGAQ7L523 313 aa18.31■□□□□ 0.52
PCDHA1-203ENST00000504120 CPXCR1Q8N123 301 aa18.31■□□□□ 0.52
PCDHA1-203ENST00000504120 ASIC3Q9UHC3 531 aa18.31■□□□□ 0.52
PCDHA1-203ENST00000504120 KAT6BQ8WYB5 2073 aa18.31■□□□□ 0.52
PCDHA1-203ENST00000504120 DTNBO60941 627 aa18.31■□□□□ 0.52
PCDHA1-203ENST00000504120 MTMR3Q13615 1198 aa18.31■□□□□ 0.52
PCDHA1-203ENST00000504120 NSMFQ6X4W1 530 aa18.31■□□□□ 0.52
PCDHA1-203ENST00000504120 TAOK1Q7L7X3 1001 aa18.31■□□□□ 0.52
PCDHA1-203ENST00000504120 CHURC1Q8WUH1 139 aa18.31■□□□□ 0.52
PCDHA1-203ENST00000504120 USP40Q9NVE5 1235 aa18.31■□□□□ 0.52
PCDHA1-203ENST00000504120 NR1I2O75469 434 aa18.31■□□□□ 0.52
PCDHA1-203ENST00000504120 OR8K1Q8NGG5 319 aa18.31■□□□□ 0.52
PCDHA1-203ENST00000504120 MAIP1Q8WWC4 291 aa18.31■□□□□ 0.52
PCDHA1-203ENST00000504120 COPRSQ9NQ92 184 aa18.31■□□□□ 0.52
PCDHA1-203ENST00000504120 FAM207AQ9NSI2 230 aaPredicted RBP18.31■□□□□ 0.52
PCDHA1-203ENST00000504120 RAD51AP2Q09MP3 1159 aa18.3■□□□□ 0.52
PCDHA1-203ENST00000504120 DCUN1D2Q6PH85 259 aa18.3■□□□□ 0.52
PCDHA1-203ENST00000504120 PLEKHF1Q96S99 279 aa18.3■□□□□ 0.52
PCDHA1-203ENST00000504120 MFSD14BQ5SR56 506 aa18.3■□□□□ 0.52
PCDHA1-203ENST00000504120 KLHL7Q8IXQ5 586 aa18.3■□□□□ 0.52
PCDHA1-203ENST00000504120 PPFIBP2Q8ND30 876 aa18.3■□□□□ 0.52
PCDHA1-203ENST00000504120 TEKT1Q969V4 418 aa18.3■□□□□ 0.52
PCDHA1-203ENST00000504120 ADCY9O60503 1353 aa18.3■□□□□ 0.52
PCDHA1-203ENST00000504120 KCNJ18B7U540 433 aa18.3■□□□□ 0.52
PCDHA1-203ENST00000504120 PCP11498 1178 aaKnown RBP18.3■□□□□ 0.52
PCDHA1-203ENST00000504120 KCNJ12Q14500 433 aa18.3■□□□□ 0.52
PCDHA1-203ENST00000504120 CCDC24Q8N4L8 307 aa18.3■□□□□ 0.52
PCDHA1-203ENST00000504120 ODF2LQ9ULJ1 636 aa18.3■□□□□ 0.52
PCDHA1-203ENST00000504120 IVNS1ABPQ9Y6Y0 642 aa18.3■□□□□ 0.52
PCDHA1-203ENST00000504120 MED23Q9ULK4 1368 aa18.3■□□□□ 0.52
PCDHA1-203ENST00000504120 TNKSO95271 1327 aa18.3■□□□□ 0.52
PCDHA1-203ENST00000504120 DDAH1O94760 285 aa18.3■□□□□ 0.52
PCDHA1-203ENST00000504120 TYW1BQ6NUM6 668 aa18.3■□□□□ 0.52
PCDHA1-203ENST00000504120 KRBA2Q6ZNG9 492 aa18.3■□□□□ 0.52
PCDHA1-203ENST00000504120 TTLL7Q6ZT98 887 aa18.3■□□□□ 0.52
PCDHA1-203ENST00000504120 SMAP1Q8IYB5 467 aaPredicted RBP18.3■□□□□ 0.52
PCDHA1-203ENST00000504120 TRIM31Q9BZY9 425 aa18.3■□□□□ 0.52
PCDHA1-203ENST00000504120 FGAP02671 866 aa18.29■□□□□ 0.52
PCDHA1-203ENST00000504120 DNM2P50570 870 aa18.29■□□□□ 0.52
PCDHA1-203ENST00000504120 DLGAP5Q15398 846 aa18.29■□□□□ 0.52
PCDHA1-203ENST00000504120 RBM6P78332 1123 aaKnown RBP18.29■□□□□ 0.52
PCDHA1-203ENST00000504120 UBE3CQ15386 1083 aa18.29■□□□□ 0.52
PCDHA1-203ENST00000504120 PPP1R21Q6ZMI0 780 aa18.29■□□□□ 0.52
PCDHA1-203ENST00000504120 MYOCDQ8IZQ8 938 aa18.29■□□□□ 0.52
PCDHA1-203ENST00000504120 PPFIA1Q13136 1202 aa18.29■□□□□ 0.52
PCDHA1-203ENST00000504120 GAS7O60861 476 aa18.29■□□□□ 0.52
PCDHA1-203ENST00000504120 IGSF3O75054 1194 aa18.29■□□□□ 0.52
PCDHA1-203ENST00000504120 ADD1P35611 737 aaKnown RBP18.29■□□□□ 0.52
PCDHA1-203ENST00000504120 RASA3Q14644 834 aa18.29■□□□□ 0.52
PCDHA1-203ENST00000504120 GABPB2Q8TAK5 448 aaPredicted RBP18.29■□□□□ 0.52
PCDHA1-203ENST00000504120 GPR108Q9NPR9 543 aa18.29■□□□□ 0.52
PCDHA1-203ENST00000504120 GABPB1Q06547 395 aaPredicted RBP18.29■□□□□ 0.52
PCDHA1-203ENST00000504120 MORC3Q14149 939 aa18.29■□□□□ 0.52
PCDHA1-203ENST00000504120 C2CD5Q86YS7 1000 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms