RNA–Protein interactions for RNA: ENST00000455548.2

SMPD4-214, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 547 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-214ENST00000455548 MYPNQ86TC9 1320 aa19.31■□□□□ 0.68
SMPD4-214ENST00000455548 TNPO2O14787 897 aaKnown RBP19.31■□□□□ 0.68
SMPD4-214ENST00000455548 NEFLP07196 543 aa19.31■□□□□ 0.68
SMPD4-214ENST00000455548 SLC9C1Q4G0N8 1177 aa19.31■□□□□ 0.68
SMPD4-214ENST00000455548 NBPF11Q86T75 865 aa19.31■□□□□ 0.68
SMPD4-214ENST00000455548 GPRC5AQ8NFJ5 357 aa19.31■□□□□ 0.68
SMPD4-214ENST00000455548 COA7Q96BR5 231 aa19.31■□□□□ 0.68
SMPD4-214ENST00000455548 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.31■□□□□ 0.68
SMPD4-214ENST00000455548 RABGAP1Q9Y3P9 1069 aa19.31■□□□□ 0.68
SMPD4-214ENST00000455548 IGKV6D-41A0A0C4DH26 115 aa19.3■□□□□ 0.68
SMPD4-214ENST00000455548 WDR46O15213 610 aaKnown RBP19.3■□□□□ 0.68
SMPD4-214ENST00000455548 TSPY3P0CV98 308 aa19.3■□□□□ 0.68
SMPD4-214ENST00000455548 TSPY8P0CW00 308 aa19.3■□□□□ 0.68
SMPD4-214ENST00000455548 CTDSPL2Q05D32 466 aa19.3■□□□□ 0.68
SMPD4-214ENST00000455548 PPP4R3BQ5MIZ7 849 aa19.3■□□□□ 0.68
SMPD4-214ENST00000455548 LBX2Q6XYB7 198 aa19.3■□□□□ 0.68
SMPD4-214ENST00000455548 NEDD1Q8NHV4 660 aa19.3■□□□□ 0.68
SMPD4-214ENST00000455548 RAET1EQ8TD07 263 aa19.3■□□□□ 0.68
SMPD4-214ENST00000455548 ARMC5Q96C12 935 aa19.3■□□□□ 0.68
SMPD4-214ENST00000455548 TANGO6Q9C0B7 1094 aa19.3■□□□□ 0.68
SMPD4-214ENST00000455548 HOXC10Q9NYD6 342 aa19.3■□□□□ 0.68
SMPD4-214ENST00000455548 RBPJLQ9UBG7 517 aa19.3■□□□□ 0.68
SMPD4-214ENST00000455548 ERVK-9P63128 1117 aa19.29■□□□□ 0.68
SMPD4-214ENST00000455548 ERVK-24P63145 666 aa19.29■□□□□ 0.68
SMPD4-214ENST00000455548 TFAP4Q01664 338 aa19.29■□□□□ 0.68
SMPD4-214ENST00000455548 COG2Q14746 738 aa19.29■□□□□ 0.68
SMPD4-214ENST00000455548 KIAA1755Q5JYT7 1200 aa19.29■□□□□ 0.68
SMPD4-214ENST00000455548 PAGR1Q9BTK6 254 aa19.29■□□□□ 0.68
SMPD4-214ENST00000455548 TXNRD2Q9NNW7 524 aa19.29■□□□□ 0.68
SMPD4-214ENST00000455548 MTMR4Q9NYA4 1195 aa19.29■□□□□ 0.68
SMPD4-214ENST00000455548 RLFQ13129 1914 aa19.29■□□□□ 0.68
SMPD4-214ENST00000455548 SPDYE16A6NNV3 312 aaPredicted RBP19.28■□□□□ 0.68
SMPD4-214ENST00000455548 ORC4O43929 436 aa19.28■□□□□ 0.68
SMPD4-214ENST00000455548 CCNA1P78396 465 aa19.28■□□□□ 0.68
SMPD4-214ENST00000455548 PRKCZQ05513 592 aa19.28■□□□□ 0.68
SMPD4-214ENST00000455548 SPICE1Q8N0Z3 855 aa19.28■□□□□ 0.68
SMPD4-214ENST00000455548 RUFY2Q8WXA3 655 aa19.28■□□□□ 0.68
SMPD4-214ENST00000455548 CEP95Q96GE4 821 aa19.28■□□□□ 0.68
SMPD4-214ENST00000455548 CLIP2Q9UDT6 1046 aa19.28■□□□□ 0.68
SMPD4-214ENST00000455548 SYNPO2Q9UMS6 1093 aa19.28■□□□□ 0.68
SMPD4-214ENST00000455548 CENPFP49454 3210 aa19.28■□□□□ 0.68
SMPD4-214ENST00000455548 LAMA4Q16363 1823 aa19.28■□□□□ 0.68
SMPD4-214ENST00000455548 RAD50Q92878 1312 aa19.27■□□□□ 0.68
SMPD4-214ENST00000455548 TSPY2A6NKD2 308 aa19.27■□□□□ 0.68
SMPD4-214ENST00000455548 RAD21O60216 631 aa19.27■□□□□ 0.68
SMPD4-214ENST00000455548 TTLL1O95922 423 aa19.27■□□□□ 0.68
SMPD4-214ENST00000455548 MAPK4P31152 587 aa19.27■□□□□ 0.68
SMPD4-214ENST00000455548 FAM47AQ5JRC9 791 aa19.27■□□□□ 0.68
SMPD4-214ENST00000455548 CCAR1Q8IX12 1150 aaKnown RBP19.27■□□□□ 0.68
SMPD4-214ENST00000455548 MKL1Q969V6 931 aa19.27■□□□□ 0.68
SMPD4-214ENST00000455548 DSCC1Q9BVC3 393 aa19.27■□□□□ 0.68
SMPD4-214ENST00000455548 GABRQQ9UN88 632 aa19.27■□□□□ 0.68
SMPD4-214ENST00000455548 PARP14Q460N5 1801 aa19.27■□□□□ 0.68
SMPD4-214ENST00000455548 KIAA0100Q14667 2235 aaKnown RBP19.27■□□□□ 0.67
SMPD4-214ENST00000455548 FLOT1O75955 427 aa19.26■□□□□ 0.67
SMPD4-214ENST00000455548 CENPBP07199 599 aaPredicted RBP19.26■□□□□ 0.67
SMPD4-214ENST00000455548 FGRP09769 529 aa19.26■□□□□ 0.67
SMPD4-214ENST00000455548 PCP11498 1178 aaKnown RBP19.26■□□□□ 0.67
SMPD4-214ENST00000455548 GRK4P32298 578 aa19.26■□□□□ 0.67
SMPD4-214ENST00000455548 FLT3LGP49771 235 aa19.26■□□□□ 0.67
SMPD4-214ENST00000455548 IRF5Q13568 498 aa19.26■□□□□ 0.67
SMPD4-214ENST00000455548 MB21D1Q8N884 522 aa19.26■□□□□ 0.67
SMPD4-214ENST00000455548 ZNF333Q96JL9 665 aa19.26■□□□□ 0.67
SMPD4-214ENST00000455548 CCDC136Q96JN2 1154 aa19.26■□□□□ 0.67
SMPD4-214ENST00000455548 TOMM22Q9NS69 142 aa19.26■□□□□ 0.67
SMPD4-214ENST00000455548 A0A0G2JMZ2 1700 aa19.25■□□□□ 0.67
SMPD4-214ENST00000455548 RANBP6O60518 1105 aaKnown RBP19.25■□□□□ 0.67
SMPD4-214ENST00000455548 PEX10O60683 326 aa19.25■□□□□ 0.67
SMPD4-214ENST00000455548 CNMDO75829 334 aa19.25■□□□□ 0.67
SMPD4-214ENST00000455548 CHMLP26374 656 aa19.25■□□□□ 0.67
SMPD4-214ENST00000455548 DSG3P32926 999 aa19.25■□□□□ 0.67
SMPD4-214ENST00000455548 RGS19P49795 217 aa19.25■□□□□ 0.67
SMPD4-214ENST00000455548 SOX10P56693 466 aa19.25■□□□□ 0.67
SMPD4-214ENST00000455548 HAND2P61296 217 aa19.25■□□□□ 0.67
SMPD4-214ENST00000455548 Q3C1V9 767 aa19.25■□□□□ 0.67
SMPD4-214ENST00000455548 POTEEQ6S8J3 1075 aa19.25■□□□□ 0.67
SMPD4-214ENST00000455548 SLAIN1Q8ND83 568 aa19.25■□□□□ 0.67
SMPD4-214ENST00000455548 RNF41Q9H4P4 317 aaPredicted RBP19.25■□□□□ 0.67
SMPD4-214ENST00000455548 INCENPQ9NQS7 918 aa19.25■□□□□ 0.67
SMPD4-214ENST00000455548 CTNNA3Q9UI47 895 aa19.25■□□□□ 0.67
SMPD4-214ENST00000455548 RBBP6Q7Z6E9 1792 aaKnown RBP19.24■□□□□ 0.67
SMPD4-214ENST00000455548 F5H6K3 240 aa19.24■□□□□ 0.67
SMPD4-214ENST00000455548 ZNF213O14771 459 aa19.24■□□□□ 0.67
SMPD4-214ENST00000455548 ADCY3O60266 1144 aa19.24■□□□□ 0.67
SMPD4-214ENST00000455548 KLRC3Q07444 240 aa19.24■□□□□ 0.67
SMPD4-214ENST00000455548 AKNAD1Q5T1N1 836 aa19.24■□□□□ 0.67
SMPD4-214ENST00000455548 MFSD6Q6ZSS7 791 aa19.24■□□□□ 0.67
SMPD4-214ENST00000455548 SH3TC2Q8TF17 1288 aa19.24■□□□□ 0.67
SMPD4-214ENST00000455548 STAG1Q8WVM7 1258 aa19.24■□□□□ 0.67
SMPD4-214ENST00000455548 CWC22Q9HCG8 908 aaKnown RBP19.24■□□□□ 0.67
SMPD4-214ENST00000455548 BTBD7Q9P203 1132 aa19.24■□□□□ 0.67
SMPD4-214ENST00000455548 TACC3Q9Y6A5 838 aa19.24■□□□□ 0.67
SMPD4-214ENST00000455548 NDUFB10O96000 172 aa19.23■□□□□ 0.67
SMPD4-214ENST00000455548 NT5C2P49902 561 aa19.23■□□□□ 0.67
SMPD4-214ENST00000455548 RRP12Q5JTH9 1297 aaKnown RBP19.23■□□□□ 0.67
SMPD4-214ENST00000455548 FAM83BQ5T0W9 1011 aa19.23■□□□□ 0.67
SMPD4-214ENST00000455548 PLEKHH3Q7Z736 793 aa19.23■□□□□ 0.67
SMPD4-214ENST00000455548 GMCL1P1Q8NEA9 526 aa19.23■□□□□ 0.67
SMPD4-214ENST00000455548 PXYLP1Q8TE99 480 aa19.23■□□□□ 0.67
SMPD4-214ENST00000455548 ATG4CQ96DT6 458 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms