RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 ZNRF3Q9ULT6 936 aa11.03□□□□□ -0.64
CMSS1-201ENST00000421999 LTBP4Q8N2S1 1624 aa11.02□□□□□ -0.64
CMSS1-201ENST00000421999 FAM13AO94988 1023 aa11.02□□□□□ -0.64
CMSS1-201ENST00000421999 STRIP1Q5VSL9 837 aa11.02□□□□□ -0.64
CMSS1-201ENST00000421999 STOX1Q6ZVD7 989 aa11.02□□□□□ -0.64
CMSS1-201ENST00000421999 CYB5R4Q7L1T6 521 aa11.02□□□□□ -0.64
CMSS1-201ENST00000421999 CPLX3Q8WVH0 158 aa11.02□□□□□ -0.64
CMSS1-201ENST00000421999 FAM212AQ96EL1 285 aa11.02□□□□□ -0.64
CMSS1-201ENST00000421999 DAGLAQ9Y4D2 1042 aa11.02□□□□□ -0.64
CMSS1-201ENST00000421999 PNPLA7Q6ZV29 1317 aa11.02□□□□□ -0.65
CMSS1-201ENST00000421999 DESP17661 470 aa11.02□□□□□ -0.65
CMSS1-201ENST00000421999 HSP90AA4PQ58FG1 418 aa11.02□□□□□ -0.65
CMSS1-201ENST00000421999 CCDC181Q5TID7 509 aa11.02□□□□□ -0.65
CMSS1-201ENST00000421999 REXO1Q8N1G1 1221 aaKnown RBP11.02□□□□□ -0.65
CMSS1-201ENST00000421999 KIF2CQ99661 725 aa11.02□□□□□ -0.65
CMSS1-201ENST00000421999 LZTS2Q9BRK4 669 aa11.02□□□□□ -0.65
CMSS1-201ENST00000421999 NMT2O60551 498 aa11.02□□□□□ -0.65
CMSS1-201ENST00000421999 CCNT1O60563 726 aaKnown RBP11.02□□□□□ -0.65
CMSS1-201ENST00000421999 IREB2P48200 963 aaKnown RBP11.02□□□□□ -0.65
CMSS1-201ENST00000421999 NONOQ15233 471 aaKnown RBP eCLIP11.02□□□□□ -0.657e-9■■□□□ 12.4
CMSS1-201ENST00000421999 ZNF397Q8NF99 534 aaPredicted RBP11.02□□□□□ -0.65
CMSS1-201ENST00000421999 MYCP01106 439 aaPredicted RBP11.01□□□□□ -0.65
CMSS1-201ENST00000421999 TOB2Q14106 344 aaPredicted RBP11.01□□□□□ -0.65
CMSS1-201ENST00000421999 TDRD12Q587J7 1177 aaKnown RBP11.01□□□□□ -0.65
CMSS1-201ENST00000421999 RILPL1Q5EBL4 403 aa11.01□□□□□ -0.65
CMSS1-201ENST00000421999 STAG1Q8WVM7 1258 aa11.01□□□□□ -0.65
CMSS1-201ENST00000421999 SLC5A4Q9NY91 659 aa11.01□□□□□ -0.65
CMSS1-201ENST00000421999 PODXL2Q9NZ53 605 aa11.01□□□□□ -0.65
CMSS1-201ENST00000421999 SWAP70Q9UH65 585 aa11.01□□□□□ -0.65
CMSS1-201ENST00000421999 PUF60Q9UHX1 559 aaKnown RBP11.01□□□□□ -0.65
CMSS1-201ENST00000421999 MTMR6Q9Y217 621 aa11.01□□□□□ -0.65
CMSS1-201ENST00000421999 RPAP1Q9BWH6 1393 aaPredicted RBP11.01□□□□□ -0.65
CMSS1-201ENST00000421999 TESPA1A2RU30 521 aaPredicted RBP11.01□□□□□ -0.65
CMSS1-201ENST00000421999 ZNF165P49910 485 aa11.01□□□□□ -0.65
CMSS1-201ENST00000421999 CUL4AQ13619 759 aa11.01□□□□□ -0.65
CMSS1-201ENST00000421999 ALX1Q15699 326 aa11.01□□□□□ -0.65
CMSS1-201ENST00000421999 AMIGO3Q86WK7 504 aa11.01□□□□□ -0.65
CMSS1-201ENST00000421999 NSUN7Q8NE18 718 aaKnown RBP11.01□□□□□ -0.65
CMSS1-201ENST00000421999 GPKOWQ92917 476 aaPredicted RBP eCLIP11.01□□□□□ -0.65
CMSS1-201ENST00000421999 MYO3BQ8WXR4 1341 aa11.01□□□□□ -0.65
CMSS1-201ENST00000421999 PHACTR2O75167 634 aa11.01□□□□□ -0.65
CMSS1-201ENST00000421999 PROM2Q8N271 834 aa11.01□□□□□ -0.65
CMSS1-201ENST00000421999 DRC1Q96MC2 740 aa11.01□□□□□ -0.65
CMSS1-201ENST00000421999 KANSL2Q9H9L4 492 aa11.01□□□□□ -0.65
CMSS1-201ENST00000421999 SPC25Q9HBM1 224 aa11.01□□□□□ -0.65
CMSS1-201ENST00000421999 ATRNO75882 1429 aa11.01□□□□□ -0.65
CMSS1-201ENST00000421999 SMCO2A6NFE2 343 aa11□□□□□ -0.65
CMSS1-201ENST00000421999 USP17L2Q6R6M4 530 aa11□□□□□ -0.65
CMSS1-201ENST00000421999 VGLL2Q8N8G2 317 aa11□□□□□ -0.65
CMSS1-201ENST00000421999 GRIN3BO60391 1043 aa11□□□□□ -0.65
CMSS1-201ENST00000421999 HARSP12081 509 aaKnown RBP11□□□□□ -0.65
CMSS1-201ENST00000421999 LIFRP42702 1097 aa11□□□□□ -0.65
CMSS1-201ENST00000421999 FAM47CQ5HY64 1035 aa11□□□□□ -0.65
CMSS1-201ENST00000421999 HS2ST1Q7LGA3 356 aa11□□□□□ -0.65
CMSS1-201ENST00000421999 AZI2Q9H6S1 392 aa11□□□□□ -0.65
CMSS1-201ENST00000421999 A0A1B0GVL5 298 aa11□□□□□ -0.65
CMSS1-201ENST00000421999 BTBD18B2RXH4 712 aa11□□□□□ -0.65
CMSS1-201ENST00000421999 DDAH1O94760 285 aa11□□□□□ -0.65
CMSS1-201ENST00000421999 TTLL1O95922 423 aa11□□□□□ -0.65
CMSS1-201ENST00000421999 RDXP35241 583 aaKnown RBP11□□□□□ -0.65
CMSS1-201ENST00000421999 CCT6AP40227 531 aaKnown RBP11□□□□□ -0.65
CMSS1-201ENST00000421999 ANO1Q5XXA6 986 aa11□□□□□ -0.65
CMSS1-201ENST00000421999 KRT26Q7Z3Y9 468 aa11□□□□□ -0.65
CMSS1-201ENST00000421999 DPP9Q86TI2 863 aa11□□□□□ -0.65
CMSS1-201ENST00000421999 FBXO11Q86XK2 927 aa11□□□□□ -0.65
CMSS1-201ENST00000421999 FOXP4Q8IVH2 680 aaPredicted RBP11□□□□□ -0.65
CMSS1-201ENST00000421999 LRP6O75581 1613 aa11□□□□□ -0.65
CMSS1-201ENST00000421999 MAP3K9P80192 1104 aa11□□□□□ -0.65
CMSS1-201ENST00000421999 KCTD1Q719H9 257 aa11□□□□□ -0.65
CMSS1-201ENST00000421999 DHX37Q8IY37 1157 aaKnown RBP11□□□□□ -0.65
CMSS1-201ENST00000421999 C2orf69Q8N8R5 385 aa11□□□□□ -0.65
CMSS1-201ENST00000421999 GLG1Q92896 1179 aa11□□□□□ -0.65
CMSS1-201ENST00000421999 NAP1L4Q99733 375 aaKnown RBP11□□□□□ -0.65
CMSS1-201ENST00000421999 RMND1Q9NWS8 449 aa11□□□□□ -0.65
CMSS1-201ENST00000421999 BRPF3Q9ULD4 1205 aa11□□□□□ -0.65
CMSS1-201ENST00000421999 CCPG1Q9ULG6 757 aa11□□□□□ -0.65
CMSS1-201ENST00000421999 SCAF8Q9UPN6 1271 aaKnown RBP11□□□□□ -0.65
CMSS1-201ENST00000421999 HOXA10P31260 410 aaPredicted RBP10.99□□□□□ -0.65
CMSS1-201ENST00000421999 ZSCAN23Q3MJ62 389 aa10.99□□□□□ -0.65
CMSS1-201ENST00000421999 NCAPH2Q6IBW4 605 aa10.99□□□□□ -0.65
CMSS1-201ENST00000421999 MAEAQ7L5Y9 396 aa10.99□□□□□ -0.65
CMSS1-201ENST00000421999 MB21D2Q8IYB1 491 aaPredicted RBP10.99□□□□□ -0.65
CMSS1-201ENST00000421999 IQUBQ8NA54 791 aa10.99□□□□□ -0.65
CMSS1-201ENST00000421999 TTC16Q8NEE8 873 aa10.99□□□□□ -0.65
CMSS1-201ENST00000421999 FBXO18Q8NFZ0 1043 aa10.99□□□□□ -0.65
CMSS1-201ENST00000421999 AIFM3Q96NN9 605 aa10.99□□□□□ -0.65
CMSS1-201ENST00000421999 EPB41L4AQ9HCS5 686 aaPredicted RBP10.99□□□□□ -0.65
CMSS1-201ENST00000421999 PCDHA1Q9Y5I3 950 aa10.99□□□□□ -0.65
CMSS1-201ENST00000421999 IQCA1LA6NCM1 817 aa10.99□□□□□ -0.65
CMSS1-201ENST00000421999 PSMA7O14818 248 aa10.99□□□□□ -0.65
CMSS1-201ENST00000421999 SLC16A2P36021 539 aa10.99□□□□□ -0.65
CMSS1-201ENST00000421999 KCTD2Q14681 263 aa10.99□□□□□ -0.65
CMSS1-201ENST00000421999 TMED8Q6PL24 325 aaPredicted RBP10.99□□□□□ -0.65
CMSS1-201ENST00000421999 KRT25Q7Z3Z0 450 aa10.99□□□□□ -0.65
CMSS1-201ENST00000421999 VPS36Q86VN1 386 aa10.99□□□□□ -0.65
CMSS1-201ENST00000421999 PSMD14O00487 310 aa10.99□□□□□ -0.65
CMSS1-201ENST00000421999 GH2P01242 217 aa10.99□□□□□ -0.65
CMSS1-201ENST00000421999 SPECC1Q5M775 1068 aa10.99□□□□□ -0.65
CMSS1-201ENST00000421999 KIAA1328Q86T90 577 aa10.99□□□□□ -0.65
CMSS1-201ENST00000421999 NLRX1Q86UT6 975 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms