RNA–Protein interactions for RNA: ENST00000598118.1

GRAMD1A-207, Transcript of GRAM domain containing 1A, humanhuman

TSL 1 (best)

Gene GRAMD1A, Length 2,277 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-207ENST00000598118 CNTNAP4Q9C0A0 1308 aa22.43■■□□□ 1.18
GRAMD1A-207ENST00000598118 TRIM75PA6NK02 468 aa22.43■■□□□ 1.18
GRAMD1A-207ENST00000598118 XBP1P17861 261 aa22.43■■□□□ 1.18
GRAMD1A-207ENST00000598118 FAM47AQ5JRC9 791 aa22.43■■□□□ 1.18
GRAMD1A-207ENST00000598118 TRMT44Q8IYL2 757 aaKnown RBP22.43■■□□□ 1.18
GRAMD1A-207ENST00000598118 KIF18AQ8NI77 898 aa22.43■■□□□ 1.18
GRAMD1A-207ENST00000598118 EPSTI1Q96J88 318 aa22.43■■□□□ 1.18
GRAMD1A-207ENST00000598118 ZNF215Q9UL58 517 aaPredicted RBP22.43■■□□□ 1.18
GRAMD1A-207ENST00000598118 CYP2D6P10635 497 aa22.43■■□□□ 1.18
GRAMD1A-207ENST00000598118 TMTC3Q6ZXV5 915 aa22.43■■□□□ 1.18
GRAMD1A-207ENST00000598118 TXNRD3Q86VQ6 643 aa22.43■■□□□ 1.18
GRAMD1A-207ENST00000598118 TMX1Q9H3N1 280 aa22.43■■□□□ 1.18
GRAMD1A-207ENST00000598118 RBM28Q9NW13 759 aaKnown RBP22.43■■□□□ 1.18
GRAMD1A-207ENST00000598118 JAG2Q9Y219 1238 aa22.43■■□□□ 1.18
GRAMD1A-207ENST00000598118 LAMB1P07942 1786 aa22.43■■□□□ 1.18
GRAMD1A-207ENST00000598118 SEMA3EO15041 775 aa22.42■■□□□ 1.18
GRAMD1A-207ENST00000598118 HIBADHP31937 336 aaKnown RBP22.42■■□□□ 1.18
GRAMD1A-207ENST00000598118 SRBD1Q8N5C6 995 aaKnown RBP22.42■■□□□ 1.18
GRAMD1A-207ENST00000598118 SPATA20Q8TB22 786 aa22.42■■□□□ 1.18
GRAMD1A-207ENST00000598118 TNFRSF25Q93038 417 aa22.42■■□□□ 1.18
GRAMD1A-207ENST00000598118 NFE2L3Q9Y4A8 694 aa22.42■■□□□ 1.18
GRAMD1A-207ENST00000598118 CNTNAP5Q8WYK1 1306 aa22.42■■□□□ 1.18
GRAMD1A-207ENST00000598118 PCP11498 1178 aaKnown RBP22.42■■□□□ 1.18
GRAMD1A-207ENST00000598118 MLKLQ8NB16 471 aa22.42■■□□□ 1.18
GRAMD1A-207ENST00000598118 NLRP3Q96P20 1036 aa22.42■■□□□ 1.18
GRAMD1A-207ENST00000598118 CCDC88AQ3V6T2 1871 aa22.42■■□□□ 1.18
GRAMD1A-207ENST00000598118 MYO1BO43795 1136 aa22.41■■□□□ 1.18
GRAMD1A-207ENST00000598118 DDAH1O94760 285 aa22.41■■□□□ 1.18
GRAMD1A-207ENST00000598118 ZNF18P17022 549 aa22.41■■□□□ 1.18
GRAMD1A-207ENST00000598118 DHX8Q14562 1220 aaKnown RBP22.41■■□□□ 1.18
GRAMD1A-207ENST00000598118 DHX58Q96C10 678 aa22.41■■□□□ 1.18
GRAMD1A-207ENST00000598118 NARFQ9UHQ1 456 aa22.41■■□□□ 1.18
GRAMD1A-207ENST00000598118 ORC4O43929 436 aa22.41■■□□□ 1.18
GRAMD1A-207ENST00000598118 CALM1P0DP23 149 aa22.41■■□□□ 1.18
GRAMD1A-207ENST00000598118 CALM2P0DP24 149 aa22.41■■□□□ 1.18
GRAMD1A-207ENST00000598118 CALM3P0DP25 149 aa22.41■■□□□ 1.18
GRAMD1A-207ENST00000598118 TOP1P11387 765 aaKnown RBP22.41■■□□□ 1.18
GRAMD1A-207ENST00000598118 VEGFAP15692 232 aaPredicted RBP22.41■■□□□ 1.18
GRAMD1A-207ENST00000598118 SLC51AQ86UW1 340 aa22.41■■□□□ 1.18
GRAMD1A-207ENST00000598118 SETDB2Q96T68 719 aa22.41■■□□□ 1.18
GRAMD1A-207ENST00000598118 KIAA1551Q9HCM1 1747 aa22.41■■□□□ 1.18
GRAMD1A-207ENST00000598118 CASP1P29466 404 aa22.4■■□□□ 1.18
GRAMD1A-207ENST00000598118 SYT10Q6XYQ8 523 aa22.4■■□□□ 1.18
GRAMD1A-207ENST00000598118 AMIGO3Q86WK7 504 aa22.4■■□□□ 1.18
GRAMD1A-207ENST00000598118 NBPF5PQ86XG9 351 aaPredicted RBP22.4■■□□□ 1.18
GRAMD1A-207ENST00000598118 ENOX1Q8TC92 643 aaKnown RBP22.4■■□□□ 1.18
GRAMD1A-207ENST00000598118 NOL12Q9UGY1 213 aaKnown RBP eCLIP22.4■■□□□ 1.18
GRAMD1A-207ENST00000598118 MORC2Q9Y6X9 1032 aaPredicted RBP22.4■■□□□ 1.18
GRAMD1A-207ENST00000598118 V9GYY5 206 aaPredicted RBP22.4■■□□□ 1.18
GRAMD1A-207ENST00000598118 KIF2AO00139 706 aaPredicted RBP22.4■■□□□ 1.18
GRAMD1A-207ENST00000598118 ADAMTS3O15072 1205 aa22.4■■□□□ 1.18
GRAMD1A-207ENST00000598118 ZNF174Q15697 407 aa22.4■■□□□ 1.18
GRAMD1A-207ENST00000598118 SYMPKQ92797 1274 aaKnown RBP22.4■■□□□ 1.18
GRAMD1A-207ENST00000598118 CRNKL1Q9BZJ0 848 aaKnown RBP22.4■■□□□ 1.18
GRAMD1A-207ENST00000598118 SAMSN1Q9NSI8 373 aaKnown RBP22.4■■□□□ 1.18
GRAMD1A-207ENST00000598118 COL24A1Q17RW2 1714 aa22.39■■□□□ 1.18
GRAMD1A-207ENST00000598118 CBX1P83916 185 aa22.39■■□□□ 1.17
GRAMD1A-207ENST00000598118 SLC4A8Q2Y0W8 1093 aa22.39■■□□□ 1.17
GRAMD1A-207ENST00000598118 KANK3Q6NY19 840 aa22.39■■□□□ 1.17
GRAMD1A-207ENST00000598118 TMEM139Q8IV31 216 aa22.39■■□□□ 1.17
GRAMD1A-207ENST00000598118 TRIML1Q8N9V2 468 aa22.39■■□□□ 1.17
GRAMD1A-207ENST00000598118 PDS5AQ29RF7 1337 aaKnown RBP22.39■■□□□ 1.17
GRAMD1A-207ENST00000598118 NRDCO43847 1150 aa22.38■■□□□ 1.17
GRAMD1A-207ENST00000598118 TM4SF1P30408 202 aa22.38■■□□□ 1.17
GRAMD1A-207ENST00000598118 AFMP43652 599 aa22.38■■□□□ 1.17
GRAMD1A-207ENST00000598118 NYXQ9GZU5 481 aa22.38■■□□□ 1.17
GRAMD1A-207ENST00000598118 SPDYE4A6NLX3 237 aa22.38■■□□□ 1.17
GRAMD1A-207ENST00000598118 RPS6KA4O75676 772 aa22.38■■□□□ 1.17
GRAMD1A-207ENST00000598118 TBX2Q13207 712 aaPredicted RBP22.38■■□□□ 1.17
GRAMD1A-207ENST00000598118 LTBP4Q8N2S1 1624 aa22.38■■□□□ 1.17
GRAMD1A-207ENST00000598118 SH3RF1Q7Z6J0 888 aa22.37■■□□□ 1.17
GRAMD1A-207ENST00000598118 ANKRD2Q9GZV1 360 aa22.37■■□□□ 1.17
GRAMD1A-207ENST00000598118 ATP8A2Q9NTI2 1148 aa22.37■■□□□ 1.17
GRAMD1A-207ENST00000598118 IRS2Q9Y4H2 1338 aa22.37■■□□□ 1.17
GRAMD1A-207ENST00000598118 RGL2O15211 777 aa22.37■■□□□ 1.17
GRAMD1A-207ENST00000598118 TTC38Q5R3I4 469 aa22.37■■□□□ 1.17
GRAMD1A-207ENST00000598118 RCSD1Q6JBY9 416 aa22.37■■□□□ 1.17
GRAMD1A-207ENST00000598118 CTCFLQ8NI51 663 aaPredicted RBP22.37■■□□□ 1.17
GRAMD1A-207ENST00000598118 PAGE5Q96GU1 130 aa22.37■■□□□ 1.17
GRAMD1A-207ENST00000598118 DACH1Q9UI36 760 aa22.37■■□□□ 1.17
GRAMD1A-207ENST00000598118 GNPATO15228 680 aa22.36■■□□□ 1.17
GRAMD1A-207ENST00000598118 SLFN14P0C7P3 912 aa22.36■■□□□ 1.17
GRAMD1A-207ENST00000598118 CDK11BP21127 795 aaKnown RBP22.36■■□□□ 1.17
GRAMD1A-207ENST00000598118 NOL10Q9BSC4 688 aaKnown RBP22.36■■□□□ 1.17
GRAMD1A-207ENST00000598118 L2HGDHQ9H9P8 463 aa22.36■■□□□ 1.17
GRAMD1A-207ENST00000598118 MAST2Q6P0Q8 1798 aa22.36■■□□□ 1.17
GRAMD1A-207ENST00000598118 USP17L8P0C7I0 530 aa22.36■■□□□ 1.17
GRAMD1A-207ENST00000598118 CD44P16070 742 aaKnown RBP22.36■■□□□ 1.17
GRAMD1A-207ENST00000598118 PLCD1P51178 756 aa22.36■■□□□ 1.17
GRAMD1A-207ENST00000598118 PTGDRQ13258 359 aa22.36■■□□□ 1.17
GRAMD1A-207ENST00000598118 SBK1Q52WX2 424 aa22.36■■□□□ 1.17
GRAMD1A-207ENST00000598118 FERMT2Q96AC1 680 aa22.36■■□□□ 1.17
GRAMD1A-207ENST00000598118 BRMS1Q9HCU9 246 aa22.36■■□□□ 1.17
GRAMD1A-207ENST00000598118 ARPP21Q9UBL0 812 aaPredicted RBP22.36■■□□□ 1.17
GRAMD1A-207ENST00000598118 ZPR1O75312 459 aa22.35■■□□□ 1.17
GRAMD1A-207ENST00000598118 RC3H1Q5TC82 1133 aaKnown RBP22.35■■□□□ 1.17
GRAMD1A-207ENST00000598118 REXO1L1PQ8IX06 675 aa22.35■■□□□ 1.17
GRAMD1A-207ENST00000598118 BTAF1O14981 1849 aa22.35■■□□□ 1.17
GRAMD1A-207ENST00000598118 VWA3AA6NCI4 1184 aa22.34■■□□□ 1.17
GRAMD1A-207ENST00000598118 SLU7O95391 586 aaKnown RBP22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms