RNA–Protein interactions for RNA: ENST00000594213.5

GTF2F1-203, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 1,002 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-203ENST00000594213 MIER1Q8N108 512 aa19.36■□□□□ 0.69
GTF2F1-203ENST00000594213 ACER1Q8TDN7 264 aa19.36■□□□□ 0.69
GTF2F1-203ENST00000594213 PANK1Q8TE04 598 aa19.36■□□□□ 0.69
GTF2F1-203ENST00000594213 GDF15Q99988 308 aa19.36■□□□□ 0.69
GTF2F1-203ENST00000594213 PLXNB2O15031 1838 aa19.36■□□□□ 0.69
GTF2F1-203ENST00000594213 CCL14Q16627 93 aa19.35■□□□□ 0.69
GTF2F1-203ENST00000594213 CERKLQ49MI3 558 aaPredicted RBP19.35■□□□□ 0.69
GTF2F1-203ENST00000594213 LHX8Q68G74 356 aa19.35■□□□□ 0.69
GTF2F1-203ENST00000594213 LBX2Q6XYB7 198 aa19.35■□□□□ 0.69
GTF2F1-203ENST00000594213 RHPN1Q8TCX5 695 aa19.35■□□□□ 0.69
GTF2F1-203ENST00000594213 PAGR1Q9BTK6 254 aa19.35■□□□□ 0.69
GTF2F1-203ENST00000594213 SOX1O00570 391 aaPredicted RBP19.34■□□□□ 0.69
GTF2F1-203ENST00000594213 BMP8BP34820 402 aa19.34■□□□□ 0.69
GTF2F1-203ENST00000594213 RGS2P41220 211 aa19.34■□□□□ 0.69
GTF2F1-203ENST00000594213 USP14P54578 494 aa19.34■□□□□ 0.69
GTF2F1-203ENST00000594213 PDE3AQ14432 1141 aa19.34■□□□□ 0.69
GTF2F1-203ENST00000594213 ABCB5Q2M3G0 1257 aa19.34■□□□□ 0.69
GTF2F1-203ENST00000594213 C11orf49Q9H6J7 331 aa19.34■□□□□ 0.69
GTF2F1-203ENST00000594213 IL1RAPL2Q9NP60 686 aa19.34■□□□□ 0.69
GTF2F1-203ENST00000594213 MYO5AQ9Y4I1 1855 aaKnown RBP19.34■□□□□ 0.69
GTF2F1-203ENST00000594213 FOCADQ5VW36 1801 aa19.34■□□□□ 0.69
GTF2F1-203ENST00000594213 CDK5RAP2Q96SN8 1893 aa19.33■□□□□ 0.69
GTF2F1-203ENST00000594213 PFASO15067 1338 aa19.33■□□□□ 0.69
GTF2F1-203ENST00000594213 COL6A1P12109 1028 aa19.33■□□□□ 0.68
GTF2F1-203ENST00000594213 PDE6AP16499 860 aa19.33■□□□□ 0.68
GTF2F1-203ENST00000594213 ZKSCAN1P17029 563 aaPredicted RBP19.33■□□□□ 0.68
GTF2F1-203ENST00000594213 VCAM1P19320 739 aa19.33■□□□□ 0.68
GTF2F1-203ENST00000594213 RAB3GAP1Q15042 981 aa19.33■□□□□ 0.68
GTF2F1-203ENST00000594213 ZYXQ15942 572 aaKnown RBP19.33■□□□□ 0.68
GTF2F1-203ENST00000594213 HSP90AB4PQ58FF6 505 aa19.33■□□□□ 0.68
GTF2F1-203ENST00000594213 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.33■□□□□ 0.68
GTF2F1-203ENST00000594213 APBA2Q99767 749 aa19.33■□□□□ 0.68
GTF2F1-203ENST00000594213 MAGEB6P1A0A0J9YX57 407 aa19.32■□□□□ 0.68
GTF2F1-203ENST00000594213 TCRBV5S4A2TA0A5A2 114 aa19.32■□□□□ 0.68
GTF2F1-203ENST00000594213 EVX2Q03828 476 aa19.32■□□□□ 0.68
GTF2F1-203ENST00000594213 MAP2K5Q13163 448 aa19.32■□□□□ 0.68
GTF2F1-203ENST00000594213 TTF1Q15361 905 aaPredicted RBP19.32■□□□□ 0.68
GTF2F1-203ENST00000594213 SIRT2Q8IXJ6 389 aa19.32■□□□□ 0.68
GTF2F1-203ENST00000594213 C7orf61Q8IZ16 206 aa19.32■□□□□ 0.68
GTF2F1-203ENST00000594213 FEZ1Q99689 392 aa19.32■□□□□ 0.68
GTF2F1-203ENST00000594213 BTBD7Q9P203 1132 aa19.32■□□□□ 0.68
GTF2F1-203ENST00000594213 IGHA2P01877 340 aa19.31■□□□□ 0.68
GTF2F1-203ENST00000594213 CCND3P30281 292 aaPredicted RBP19.31■□□□□ 0.68
GTF2F1-203ENST00000594213 SLC9C2Q5TAH2 1124 aa19.31■□□□□ 0.68
GTF2F1-203ENST00000594213 CCAR1Q8IX12 1150 aaKnown RBP19.31■□□□□ 0.68
GTF2F1-203ENST00000594213 CABP5Q9NP86 173 aa19.31■□□□□ 0.68
GTF2F1-203ENST00000594213 ZMYND8Q9ULU4 1186 aaPredicted RBP19.31■□□□□ 0.68
GTF2F1-203ENST00000594213 ZBED9Q6R2W3 1325 aa19.3■□□□□ 0.68
GTF2F1-203ENST00000594213 A0A1W2PRG0 241 aa19.3■□□□□ 0.68
GTF2F1-203ENST00000594213 SLC15A5A6NIM6 579 aa19.3■□□□□ 0.68
GTF2F1-203ENST00000594213 SPDYE16A6NNV3 312 aaPredicted RBP19.3■□□□□ 0.68
GTF2F1-203ENST00000594213 HOXC6P09630 235 aa19.3■□□□□ 0.68
GTF2F1-203ENST00000594213 PTPREP23469 700 aa19.3■□□□□ 0.68
GTF2F1-203ENST00000594213 CCNA1P78396 465 aa19.3■□□□□ 0.68
GTF2F1-203ENST00000594213 SEPT2Q15019 361 aa19.3■□□□□ 0.68
GTF2F1-203ENST00000594213 RPAP2Q8IXW5 612 aaPredicted RBP19.3■□□□□ 0.68
GTF2F1-203ENST00000594213 KIF1BPQ96EK5 621 aa19.3■□□□□ 0.68
GTF2F1-203ENST00000594213 EDC3Q96F86 508 aaKnown RBP19.3■□□□□ 0.68
GTF2F1-203ENST00000594213 LRCH3Q96II8 777 aa19.3■□□□□ 0.68
GTF2F1-203ENST00000594213 CRNKL1Q9BZJ0 848 aaKnown RBP19.3■□□□□ 0.68
GTF2F1-203ENST00000594213 FLRT1Q9NZU1 646 aa19.3■□□□□ 0.68
GTF2F1-203ENST00000594213 ZNF532Q9HCE3 1301 aa19.29■□□□□ 0.68
GTF2F1-203ENST00000594213 POLR3DP05423 398 aaPredicted RBP19.29■□□□□ 0.68
GTF2F1-203ENST00000594213 CLASRPQ8N2M8 674 aaKnown RBP19.29■□□□□ 0.68
GTF2F1-203ENST00000594213 RPAP3Q9H6T3 665 aaPredicted RBP19.29■□□□□ 0.68
GTF2F1-203ENST00000594213 DCP1AQ9NPI6 582 aaPredicted RBP19.29■□□□□ 0.68
GTF2F1-203ENST00000594213 ZBTB40Q9NUA8 1239 aa19.29■□□□□ 0.68
GTF2F1-203ENST00000594213 A0A0C4DFX4 3053 aa19.29■□□□□ 0.68
GTF2F1-203ENST00000594213 ALPK3Q96L96 1907 aa19.29■□□□□ 0.68
GTF2F1-203ENST00000594213 COL6A3P12111 3177 aa19.28■□□□□ 0.68
GTF2F1-203ENST00000594213 GLRX3O76003 335 aaKnown RBP19.28■□□□□ 0.68
GTF2F1-203ENST00000594213 GRB14Q14449 540 aa19.28■□□□□ 0.68
GTF2F1-203ENST00000594213 MCM9Q9NXL9 1143 aa19.28■□□□□ 0.68
GTF2F1-203ENST00000594213 GOLIM4O00461 696 aa19.27■□□□□ 0.68
GTF2F1-203ENST00000594213 SYN1P17600 705 aa19.27■□□□□ 0.68
GTF2F1-203ENST00000594213 MAGEA10P43363 369 aaPredicted RBP19.27■□□□□ 0.68
GTF2F1-203ENST00000594213 SIAH1Q8IUQ4 282 aa19.27■□□□□ 0.68
GTF2F1-203ENST00000594213 LCORLQ8N3X6 602 aa19.27■□□□□ 0.68
GTF2F1-203ENST00000594213 NPLOC4Q8TAT6 608 aa19.27■□□□□ 0.68
GTF2F1-203ENST00000594213 SDR42E1Q8WUS8 393 aa19.27■□□□□ 0.68
GTF2F1-203ENST00000594213 MYH1P12882 1939 aa19.26■□□□□ 0.67
GTF2F1-203ENST00000594213 CYP2D6P10635 497 aa19.26■□□□□ 0.67
GTF2F1-203ENST00000594213 MS4A1P11836 297 aa19.26■□□□□ 0.67
GTF2F1-203ENST00000594213 LRRC26Q2I0M4 334 aa19.26■□□□□ 0.67
GTF2F1-203ENST00000594213 KIAA1755Q5JYT7 1200 aa19.26■□□□□ 0.67
GTF2F1-203ENST00000594213 MFSD14CQ5VZR4 134 aa19.26■□□□□ 0.67
GTF2F1-203ENST00000594213 RAB11FIP3O75154 756 aa19.25■□□□□ 0.67
GTF2F1-203ENST00000594213 IFIT2P09913 472 aaKnown RBP19.25■□□□□ 0.67
GTF2F1-203ENST00000594213 COG2Q14746 738 aa19.25■□□□□ 0.67
GTF2F1-203ENST00000594213 LRIT3Q3SXY7 679 aa19.25■□□□□ 0.67
GTF2F1-203ENST00000594213 SLFNL1Q499Z3 407 aa19.25■□□□□ 0.67
GTF2F1-203ENST00000594213 GPR153Q6NV75 609 aa19.25■□□□□ 0.67
GTF2F1-203ENST00000594213 SLC44A5Q8NCS7 719 aa19.25■□□□□ 0.67
GTF2F1-203ENST00000594213 DNAJC2Q99543 621 aaKnown RBP19.25■□□□□ 0.67
GTF2F1-203ENST00000594213 HOXC10Q9NYD6 342 aa19.25■□□□□ 0.67
GTF2F1-203ENST00000594213 DNAH12Q6ZR08 3092 aa19.25■□□□□ 0.67
GTF2F1-203ENST00000594213 APBB1O00213 710 aa19.24■□□□□ 0.67
GTF2F1-203ENST00000594213 PRKAB2O43741 272 aa19.24■□□□□ 0.67
GTF2F1-203ENST00000594213 HMMRO75330 724 aa19.24■□□□□ 0.67
GTF2F1-203ENST00000594213 ATP5JP18859 108 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms