RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 ATG14Q6ZNE5 492 aa7□□□□□ -1.29
SMCHD1-206ENST00000581631 PRRG2O14669 202 aa6.99□□□□□ -1.29
SMCHD1-206ENST00000581631 P4HBP07237 508 aaKnown RBP6.99□□□□□ -1.29
SMCHD1-206ENST00000581631 CYP7A1P22680 504 aa6.99□□□□□ -1.29
SMCHD1-206ENST00000581631 ZSCAN29Q8IWY8 852 aaPredicted RBP6.99□□□□□ -1.29
SMCHD1-206ENST00000581631 PPP1R13LQ8WUF5 828 aa6.99□□□□□ -1.29
SMCHD1-206ENST00000581631 DPH2Q9BQC3 489 aaPredicted RBP6.99□□□□□ -1.29
SMCHD1-206ENST00000581631 ADAMTS10Q9H324 1103 aa6.99□□□□□ -1.29
SMCHD1-206ENST00000581631 TTF2Q9UNY4 1162 aaKnown RBP6.99□□□□□ -1.29
SMCHD1-206ENST00000581631 TMEM253P0C7T8 217 aa6.98□□□□□ -1.29
SMCHD1-206ENST00000581631 RAC2P15153 192 aa6.98□□□□□ -1.29
SMCHD1-206ENST00000581631 AGMOQ6ZNB7 445 aa6.98□□□□□ -1.29
SMCHD1-206ENST00000581631 MYLIPQ8WY64 445 aa6.98□□□□□ -1.29
SMCHD1-206ENST00000581631 TMEM87BQ96K49 555 aa6.98□□□□□ -1.29
SMCHD1-206ENST00000581631 SMG5Q9UPR3 1016 aaKnown RBP6.98□□□□□ -1.29
SMCHD1-206ENST00000581631 HK2P52789 917 aa6.97□□□□□ -1.29
SMCHD1-206ENST00000581631 ATP2B2Q01814 1243 aa6.97□□□□□ -1.29
SMCHD1-206ENST00000581631 SLC6A19Q695T7 634 aa6.97□□□□□ -1.29
SMCHD1-206ENST00000581631 MCATQ8IVS2 390 aaKnown RBP6.97□□□□□ -1.29
SMCHD1-206ENST00000581631 ACSF2Q96CM8 615 aaPredicted RBP6.97□□□□□ -1.29
SMCHD1-206ENST00000581631 FRMD6Q96NE9 622 aa6.97□□□□□ -1.29
SMCHD1-206ENST00000581631 SLC26A8Q96RN1 970 aa6.97□□□□□ -1.29
SMCHD1-206ENST00000581631 ARID3AQ99856 593 aa6.97□□□□□ -1.29
SMCHD1-206ENST00000581631 GPR62Q9BZJ7 368 aa6.97□□□□□ -1.29
SMCHD1-206ENST00000581631 RNF32Q9H0A6 362 aa6.97□□□□□ -1.29
SMCHD1-206ENST00000581631 ADAMTS20P59510 1910 aa6.97□□□□□ -1.29
SMCHD1-206ENST00000581631 TCAF2A6NFQ2 919 aa6.96□□□□□ -1.3
SMCHD1-206ENST00000581631 B8ZZF3 427 aa6.96□□□□□ -1.3
SMCHD1-206ENST00000581631 INHBBP09529 407 aa6.96□□□□□ -1.3
SMCHD1-206ENST00000581631 ZGLP1P0C6A0 271 aa6.96□□□□□ -1.3
SMCHD1-206ENST00000581631 TRHRP34981 398 aaPredicted RBP6.96□□□□□ -1.3
SMCHD1-206ENST00000581631 LINC00310P59036 64 aa6.96□□□□□ -1.3
SMCHD1-206ENST00000581631 CREG2Q8IUH2 290 aa6.96□□□□□ -1.3
SMCHD1-206ENST00000581631 PGRP06401 933 aa6.95□□□□□ -1.3
SMCHD1-206ENST00000581631 TPP2P29144 1249 aaPredicted RBP6.95□□□□□ -1.3
SMCHD1-206ENST00000581631 ETV3P41162 512 aa6.95□□□□□ -1.3
SMCHD1-206ENST00000581631 TIGD5Q53EQ6 642 aa6.95□□□□□ -1.3
SMCHD1-206ENST00000581631 ADAM30Q9UKF2 790 aa6.95□□□□□ -1.3
SMCHD1-206ENST00000581631 CEP131Q9UPN4 1083 aa6.95□□□□□ -1.3
SMCHD1-206ENST00000581631 TFE3P19532 575 aaPredicted RBP6.94□□□□□ -1.3
SMCHD1-206ENST00000581631 GNA15P30679 374 aa6.94□□□□□ -1.3
SMCHD1-206ENST00000581631 BUD31P41223 144 aaPredicted RBP6.94□□□□□ -1.3
SMCHD1-206ENST00000581631 LIG3P49916 1009 aa6.94□□□□□ -1.3
SMCHD1-206ENST00000581631 NR0B2Q15466 257 aa6.94□□□□□ -1.3
SMCHD1-206ENST00000581631 CCDC85BQ15834 202 aaPredicted RBP6.94□□□□□ -1.3
SMCHD1-206ENST00000581631 CIAPIN1Q6FI81 312 aa6.94□□□□□ -1.3
SMCHD1-206ENST00000581631 IRF2BP1Q8IU81 584 aa6.94□□□□□ -1.3
SMCHD1-206ENST00000581631 DTWD2Q8NBA8 298 aa6.94□□□□□ -1.3
SMCHD1-206ENST00000581631 PDZD8Q8NEN9 1154 aa6.94□□□□□ -1.3
SMCHD1-206ENST00000581631 C20orf173Q96LM9 149 aa6.94□□□□□ -1.3
SMCHD1-206ENST00000581631 MCOLN1Q9GZU1 580 aa6.94□□□□□ -1.3
SMCHD1-206ENST00000581631 MYOCOSA0A1B0GUC4 107 aa6.93□□□□□ -1.3
SMCHD1-206ENST00000581631 LDHBP07195 334 aaKnown RBP6.93□□□□□ -1.3
SMCHD1-206ENST00000581631 TSPYL5Q86VY4 417 aaPredicted RBP6.93□□□□□ -1.3
SMCHD1-206ENST00000581631 LILRA2Q8N149 483 aa6.93□□□□□ -1.3
SMCHD1-206ENST00000581631 EIF4BP23588 611 aaKnown RBP6.92□□□□□ -1.3
SMCHD1-206ENST00000581631 RPL6Q02878 288 aaKnown RBP6.92□□□□□ -1.3
SMCHD1-206ENST00000581631 KCNN1Q92952 543 aa6.92□□□□□ -1.3
SMCHD1-206ENST00000581631 TRIT1Q9H3H1 467 aaKnown RBP6.92□□□□□ -1.3
SMCHD1-206ENST00000581631 RNF19AQ9NV58 838 aa6.92□□□□□ -1.3
SMCHD1-206ENST00000581631 EBF1Q9UH73 591 aa6.92□□□□□ -1.3
SMCHD1-206ENST00000581631 DUSP13Q9UII6 198 aa6.92□□□□□ -1.3
SMCHD1-206ENST00000581631 HOXA5P20719 270 aa6.91□□□□□ -1.3
SMCHD1-206ENST00000581631 EGR3Q06889 387 aa6.91□□□□□ -1.3
SMCHD1-206ENST00000581631 CYB5D2Q8WUJ1 264 aa6.91□□□□□ -1.3
SMCHD1-206ENST00000581631 C19orf44Q9H6X5 657 aa6.91□□□□□ -1.3
SMCHD1-206ENST00000581631 ZNF281Q9Y2X9 895 aa6.91□□□□□ -1.3
SMCHD1-206ENST00000581631 AK5Q9Y6K8 562 aa6.91□□□□□ -1.3
SMCHD1-206ENST00000581631 IVNS1ABPQ9Y6Y0 642 aa6.91□□□□□ -1.3
SMCHD1-206ENST00000581631 NUAK1O60285 661 aa6.9□□□□□ -1.3
SMCHD1-206ENST00000581631 PEX10O60683 326 aa6.9□□□□□ -1.3
SMCHD1-206ENST00000581631 PDE4BQ07343 736 aa6.9□□□□□ -1.3
SMCHD1-206ENST00000581631 TSNAXIP1Q2TAA8 658 aa6.9□□□□□ -1.3
SMCHD1-206ENST00000581631 SHISA4Q96DD7 197 aa6.9□□□□□ -1.3
SMCHD1-206ENST00000581631 MIR1-1HGQ9H1L0 117 aa6.9□□□□□ -1.3
SMCHD1-206ENST00000581631 SLC6A17Q9H1V8 727 aa6.9□□□□□ -1.3
SMCHD1-206ENST00000581631 GCM1Q9NP62 436 aa6.9□□□□□ -1.3
SMCHD1-206ENST00000581631 YBX2Q9Y2T7 364 aaKnown RBP6.9□□□□□ -1.3
SMCHD1-206ENST00000581631 PCDHA11Q9Y5I1 949 aa6.9□□□□□ -1.3
SMCHD1-206ENST00000581631 CORINQ9Y5Q5 1042 aa6.9□□□□□ -1.3
SMCHD1-206ENST00000581631 FITM1A5D6W6 292 aa6.89□□□□□ -1.31
SMCHD1-206ENST00000581631 PRPF40AO75400 957 aaKnown RBP6.89□□□□□ -1.31
SMCHD1-206ENST00000581631 DLG4P78352 724 aa6.89□□□□□ -1.31
SMCHD1-206ENST00000581631 TMEM201Q5SNT2 666 aa6.89□□□□□ -1.31
SMCHD1-206ENST00000581631 RNF141Q8WVD5 230 aa6.89□□□□□ -1.31
SMCHD1-206ENST00000581631 INTS4Q96HW7 963 aaKnown RBP6.89□□□□□ -1.31
SMCHD1-206ENST00000581631 CWC22Q9HCG8 908 aaKnown RBP6.89□□□□□ -1.31
SMCHD1-206ENST00000581631 GPATCH2Q9NW75 528 aa6.89□□□□□ -1.31
SMCHD1-206ENST00000581631 RBM47A0AV96 593 aaKnown RBP6.88□□□□□ -1.31
SMCHD1-206ENST00000581631 UPK3BL1B0FP48 263 aa6.88□□□□□ -1.31
SMCHD1-206ENST00000581631 UPK3BL2E5RIL1 263 aa6.88□□□□□ -1.31
SMCHD1-206ENST00000581631 LRRN2O75325 713 aa6.88□□□□□ -1.31
SMCHD1-206ENST00000581631 SEMA7AO75326 666 aa6.88□□□□□ -1.31
SMCHD1-206ENST00000581631 CTSWP56202 376 aa6.88□□□□□ -1.31
SMCHD1-206ENST00000581631 TEKQ02763 1124 aa6.88□□□□□ -1.31
SMCHD1-206ENST00000581631 MAP3K11Q16584 847 aa6.88□□□□□ -1.31
SMCHD1-206ENST00000581631 MEI1Q5TIA1 1274 aa6.88□□□□□ -1.31
SMCHD1-206ENST00000581631 BAHD1Q8TBE0 780 aaPredicted RBP6.88□□□□□ -1.31
SMCHD1-206ENST00000581631 G6PC3Q9BUM1 346 aa6.88□□□□□ -1.31
SMCHD1-206ENST00000581631 IRF2BPLQ9H1B7 796 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms