RNA–Protein interactions for RNA: ENST00000573332.5

LITAF-212, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-212ENST00000573332 RNF186Q9NXI6 227 aa20.48■□□□□ 0.87
LITAF-212ENST00000573332 IGKV6D-41A0A0C4DH26 115 aa20.47■□□□□ 0.87
LITAF-212ENST00000573332 HAND2P61296 217 aa20.47■□□□□ 0.87
LITAF-212ENST00000573332 ANKRD23Q86SG2 305 aa20.47■□□□□ 0.87
LITAF-212ENST00000573332 SIAH1Q8IUQ4 282 aa20.47■□□□□ 0.87
LITAF-212ENST00000573332 PROCA1Q8NCQ7 364 aaPredicted RBP20.47■□□□□ 0.87
LITAF-212ENST00000573332 NEDD1Q8NHV4 660 aa20.47■□□□□ 0.87
LITAF-212ENST00000573332 KIAA1683Q9H0B3 1180 aa20.47■□□□□ 0.87
LITAF-212ENST00000573332 PLIN4Q96Q06 1357 aa20.46■□□□□ 0.87
LITAF-212ENST00000573332 PHIPQ8WWQ0 1821 aa20.46■□□□□ 0.87
LITAF-212ENST00000573332 ATAD5Q96QE3 1844 aa20.46■□□□□ 0.87
LITAF-212ENST00000573332 BTBD19C9JJ37 291 aa20.46■□□□□ 0.87
LITAF-212ENST00000573332 HSPA1AP0DMV8 641 aaKnown RBP20.46■□□□□ 0.87
LITAF-212ENST00000573332 HSPA1BP0DMV9 641 aaKnown RBP20.46■□□□□ 0.87
LITAF-212ENST00000573332 GPAT2Q6NUI2 795 aa20.46■□□□□ 0.87
LITAF-212ENST00000573332 MFSD6Q6ZSS7 791 aa20.46■□□□□ 0.87
LITAF-212ENST00000573332 TBC1D10CQ8IV04 446 aa20.46■□□□□ 0.87
LITAF-212ENST00000573332 C12orf42Q96LP6 360 aa20.46■□□□□ 0.87
LITAF-212ENST00000573332 INCENPQ9NQS7 918 aa20.46■□□□□ 0.87
LITAF-212ENST00000573332 TSPY3P0CV98 308 aa20.45■□□□□ 0.86
LITAF-212ENST00000573332 TSPY8P0CW00 308 aa20.45■□□□□ 0.86
LITAF-212ENST00000573332 USP14P54578 494 aa20.45■□□□□ 0.86
LITAF-212ENST00000573332 TFAP4Q01664 338 aa20.45■□□□□ 0.86
LITAF-212ENST00000573332 ICA1Q05084 483 aa20.45■□□□□ 0.86
LITAF-212ENST00000573332 MTMR2Q13614 643 aa20.45■□□□□ 0.86
LITAF-212ENST00000573332 FAM43AQ8N2R8 423 aa20.45■□□□□ 0.86
LITAF-212ENST00000573332 ACER1Q8TDN7 264 aa20.45■□□□□ 0.86
LITAF-212ENST00000573332 NYAP2Q9P242 653 aa20.45■□□□□ 0.86
LITAF-212ENST00000573332 SLC45A1Q9Y2W3 748 aa20.45■□□□□ 0.86
LITAF-212ENST00000573332 RBM8AQ9Y5S9 174 aaKnown RBP20.45■□□□□ 0.86
LITAF-212ENST00000573332 A0A1W2PRG0 241 aa20.44■□□□□ 0.86
LITAF-212ENST00000573332 CYP21A2P08686 494 aa20.44■□□□□ 0.86
LITAF-212ENST00000573332 HMGCS2P54868 508 aa20.44■□□□□ 0.86
LITAF-212ENST00000573332 USP17L2Q6R6M4 530 aa20.44■□□□□ 0.86
LITAF-212ENST00000573332 ARHGEF10LQ9HCE6 1279 aa20.44■□□□□ 0.86
LITAF-212ENST00000573332 ANO2Q9NQ90 1003 aa20.44■□□□□ 0.86
LITAF-212ENST00000573332 AGTPBP1Q9UPW5 1226 aa20.44■□□□□ 0.86
LITAF-212ENST00000573332 TMX2Q9Y320 296 aa20.44■□□□□ 0.86
LITAF-212ENST00000573332 GTF3C3Q9Y5Q9 886 aa20.44■□□□□ 0.86
LITAF-212ENST00000573332 TSPY2A6NKD2 308 aa20.43■□□□□ 0.86
LITAF-212ENST00000573332 TRPA1O75762 1119 aa20.43■□□□□ 0.86
LITAF-212ENST00000573332 NECTIN1Q15223 517 aa20.43■□□□□ 0.86
LITAF-212ENST00000573332 FAM47AQ5JRC9 791 aa20.43■□□□□ 0.86
LITAF-212ENST00000573332 PPP4R3BQ5MIZ7 849 aa20.43■□□□□ 0.86
LITAF-212ENST00000573332 GADL1Q6ZQY3 521 aa20.43■□□□□ 0.86
LITAF-212ENST00000573332 SH2D4AQ9H788 454 aa20.43■□□□□ 0.86
LITAF-212ENST00000573332 EMILIN3Q9NT22 766 aa20.43■□□□□ 0.86
LITAF-212ENST00000573332 TCP11L1Q9NUJ3 509 aa20.43■□□□□ 0.86
LITAF-212ENST00000573332 MTMR4Q9NYA4 1195 aa20.43■□□□□ 0.86
LITAF-212ENST00000573332 TMOD4Q9NZQ9 345 aa20.43■□□□□ 0.86
LITAF-212ENST00000573332 SYNPO2Q9UMS6 1093 aa20.43■□□□□ 0.86
LITAF-212ENST00000573332 FOXN1O15353 648 aa20.42■□□□□ 0.86
LITAF-212ENST00000573332 EPB41L2O43491 1005 aaKnown RBP20.42■□□□□ 0.86
LITAF-212ENST00000573332 RANBP6O60518 1105 aaKnown RBP20.42■□□□□ 0.86
LITAF-212ENST00000573332 EEF2P13639 858 aaKnown RBP20.42■□□□□ 0.86
LITAF-212ENST00000573332 NOVP48745 357 aa20.42■□□□□ 0.86
LITAF-212ENST00000573332 ESR2Q92731 530 aa20.42■□□□□ 0.86
LITAF-212ENST00000573332 MKL1Q969V6 931 aa20.42■□□□□ 0.86
LITAF-212ENST00000573332 FEZ1Q99689 392 aa20.42■□□□□ 0.86
LITAF-212ENST00000573332 CNNM2Q9H8M5 875 aa20.42■□□□□ 0.86
LITAF-212ENST00000573332 GREB1LQ9C091 1923 aaPredicted RBP20.41■□□□□ 0.86
LITAF-212ENST00000573332 PDHXO00330 501 aa20.41■□□□□ 0.86
LITAF-212ENST00000573332 HOXA7P31268 230 aaPredicted RBP20.41■□□□□ 0.86
LITAF-212ENST00000573332 NOM1Q5C9Z4 860 aaKnown RBP20.41■□□□□ 0.86
LITAF-212ENST00000573332 CLEC10AQ8IUN9 316 aa20.41■□□□□ 0.86
LITAF-212ENST00000573332 CEP95Q96GE4 821 aa20.41■□□□□ 0.86
LITAF-212ENST00000573332 KRT23Q9C075 422 aa20.41■□□□□ 0.86
LITAF-212ENST00000573332 TOMM22Q9NS69 142 aa20.41■□□□□ 0.86
LITAF-212ENST00000573332 NEDD4P46934 1319 aa20.41■□□□□ 0.86
LITAF-212ENST00000573332 TTLL1O95922 423 aa20.4■□□□□ 0.86
LITAF-212ENST00000573332 CTCFP49711 727 aaPredicted RBP20.4■□□□□ 0.86
LITAF-212ENST00000573332 PABPC4Q13310 644 aaKnown RBP eCLIP20.4■□□□□ 0.86
LITAF-212ENST00000573332 TAF1CQ15572 869 aaPredicted RBP20.4■□□□□ 0.86
LITAF-212ENST00000573332 RRP12Q5JTH9 1297 aaKnown RBP20.4■□□□□ 0.86
LITAF-212ENST00000573332 TREML2Q5T2D2 321 aa20.4■□□□□ 0.86
LITAF-212ENST00000573332 VCPKMTQ9H867 229 aa20.4■□□□□ 0.86
LITAF-212ENST00000573332 IL17RBQ9NRM6 502 aa20.4■□□□□ 0.86
LITAF-212ENST00000573332 LAMA4Q16363 1823 aa20.39■□□□□ 0.86
LITAF-212ENST00000573332 REC8O95072 547 aa20.39■□□□□ 0.85
LITAF-212ENST00000573332 DGKZQ13574 1117 aa20.39■□□□□ 0.85
LITAF-212ENST00000573332 LPAR1Q92633 364 aa20.39■□□□□ 0.85
LITAF-212ENST00000573332 ZFYVE28Q9HCC9 887 aa20.39■□□□□ 0.85
LITAF-212ENST00000573332 MYH8P13535 1937 aa20.39■□□□□ 0.85
LITAF-212ENST00000573332 PTPRFP10586 1907 aa20.38■□□□□ 0.85
LITAF-212ENST00000573332 E7EWF7 191 aa20.38■□□□□ 0.85
LITAF-212ENST00000573332 SLC27A2O14975 620 aa20.38■□□□□ 0.85
LITAF-212ENST00000573332 TBC1D8O95759 1140 aa20.38■□□□□ 0.85
LITAF-212ENST00000573332 HSPA8P11142 646 aaKnown RBP20.38■□□□□ 0.85
LITAF-212ENST00000573332 CRHR2Q13324 411 aa20.38■□□□□ 0.85
LITAF-212ENST00000573332 CREB3L3Q68CJ9 461 aa20.38■□□□□ 0.85
LITAF-212ENST00000573332 NKX2-3Q8TAU0 364 aa20.38■□□□□ 0.85
LITAF-212ENST00000573332 TTC14Q96N46 770 aa20.38■□□□□ 0.85
LITAF-212ENST00000573332 PARK7Q99497 189 aaKnown RBP20.38■□□□□ 0.85
LITAF-212ENST00000573332 CLIP2Q9UDT6 1046 aa20.38■□□□□ 0.85
LITAF-212ENST00000573332 PNMA3Q9UL41 463 aa20.38■□□□□ 0.85
LITAF-212ENST00000573332 LOC285556D6RIA3 1793 aa20.37■□□□□ 0.85
LITAF-212ENST00000573332 B4E1Z4 1266 aa20.37■□□□□ 0.85
LITAF-212ENST00000573332 TLR2O60603 784 aa20.37■□□□□ 0.85
LITAF-212ENST00000573332 KDM4AO75164 1064 aa20.37■□□□□ 0.85
LITAF-212ENST00000573332 VCAM1P19320 739 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms