RNA–Protein interactions for RNA: ENST00000555254.5

PSEN1-212, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 754 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-212ENST00000555254 TPCN1Q9ULQ1 816 aa20.68■□□□□ 0.9
PSEN1-212ENST00000555254 NPM3O75607 178 aaKnown RBP20.67■□□□□ 0.9
PSEN1-212ENST00000555254 FGRP09769 529 aa20.67■□□□□ 0.9
PSEN1-212ENST00000555254 MAP2K1Q02750 393 aaPredicted RBP20.67■□□□□ 0.9
PSEN1-212ENST00000555254 SYNE3Q6ZMZ3 975 aa20.67■□□□□ 0.9
PSEN1-212ENST00000555254 NFXL1Q6ZNB6 911 aa20.67■□□□□ 0.9
PSEN1-212ENST00000555254 CYB5R4Q7L1T6 521 aa20.67■□□□□ 0.9
PSEN1-212ENST00000555254 IQCA1Q86XH1 822 aa20.67■□□□□ 0.9
PSEN1-212ENST00000555254 ZNF444Q8N0Y2 327 aaPredicted RBP20.67■□□□□ 0.9
PSEN1-212ENST00000555254 WRNIP1Q96S55 665 aa20.67■□□□□ 0.9
PSEN1-212ENST00000555254 AGXT2Q9BYV1 514 aa20.67■□□□□ 0.9
PSEN1-212ENST00000555254 OSBPL5Q9H0X9 879 aaPredicted RBP20.67■□□□□ 0.9
PSEN1-212ENST00000555254 CHMP5Q9NZZ3 219 aa20.67■□□□□ 0.9
PSEN1-212ENST00000555254 CIZ1Q9ULV3 898 aaPredicted RBP20.67■□□□□ 0.9
PSEN1-212ENST00000555254 CSADQ9Y600 493 aa20.67■□□□□ 0.9
PSEN1-212ENST00000555254 ANTXR2P58335 489 aa20.66■□□□□ 0.9
PSEN1-212ENST00000555254 APOBRQ0VD83 1088 aa20.66■□□□□ 0.9
PSEN1-212ENST00000555254 ME3Q16798 604 aa20.66■□□□□ 0.9
PSEN1-212ENST00000555254 CCDC178Q5BJE1 867 aa20.66■□□□□ 0.9
PSEN1-212ENST00000555254 ZKSCAN4Q969J2 545 aaPredicted RBP20.66■□□□□ 0.9
PSEN1-212ENST00000555254 ZNF274Q96GC6 653 aaPredicted RBP20.66■□□□□ 0.9
PSEN1-212ENST00000555254 BEGAINQ9BUH8 593 aa20.66■□□□□ 0.9
PSEN1-212ENST00000555254 SLURP2P0DP57 97 aa20.65■□□□□ 0.9
PSEN1-212ENST00000555254 COL9A3Q14050 684 aaPredicted RBP20.65■□□□□ 0.9
PSEN1-212ENST00000555254 VGLL4Q14135 290 aa20.65■□□□□ 0.9
PSEN1-212ENST00000555254 SLC4A8Q2Y0W8 1093 aa20.65■□□□□ 0.9
PSEN1-212ENST00000555254 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.65■□□□□ 0.9
PSEN1-212ENST00000555254 CCDC83Q8IWF9 413 aa20.65■□□□□ 0.9
PSEN1-212ENST00000555254 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.65■□□□□ 0.9
PSEN1-212ENST00000555254 DHX36Q9H2U1 1008 aaKnown RBP20.65■□□□□ 0.9
PSEN1-212ENST00000555254 SMC3Q9UQE7 1217 aa20.65■□□□□ 0.9
PSEN1-212ENST00000555254 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.65■□□□□ 0.9
PSEN1-212ENST00000555254 CCDC69A6NI79 296 aa20.64■□□□□ 0.89
PSEN1-212ENST00000555254 UNCXA6NJT0 531 aa20.64■□□□□ 0.89
PSEN1-212ENST00000555254 SH2B2O14492 632 aaPredicted RBP20.64■□□□□ 0.89
PSEN1-212ENST00000555254 PRDM1O75626 825 aa20.64■□□□□ 0.89
PSEN1-212ENST00000555254 STK3Q13188 491 aa20.64■□□□□ 0.89
PSEN1-212ENST00000555254 WTAPQ15007 396 aa20.64■□□□□ 0.89
PSEN1-212ENST00000555254 SPRYD7Q5W111 196 aa20.64■□□□□ 0.89
PSEN1-212ENST00000555254 TRIM34Q9BYJ4 488 aa20.64■□□□□ 0.89
PSEN1-212ENST00000555254 TAOK2Q9UL54 1235 aa20.64■□□□□ 0.89
PSEN1-212ENST00000555254 TACC3Q9Y6A5 838 aa20.64■□□□□ 0.89
PSEN1-212ENST00000555254 ROBO3Q96MS0 1386 aa20.63■□□□□ 0.89
PSEN1-212ENST00000555254 LAMA4Q16363 1823 aa20.63■□□□□ 0.89
PSEN1-212ENST00000555254 KLF18A0A0U1RQI7 1052 aa20.63■□□□□ 0.89
PSEN1-212ENST00000555254 TSPY2A6NKD2 308 aa20.63■□□□□ 0.89
PSEN1-212ENST00000555254 DHX16O60231 1041 aaKnown RBP20.63■□□□□ 0.89
PSEN1-212ENST00000555254 PFKFB2O60825 505 aa20.63■□□□□ 0.89
PSEN1-212ENST00000555254 INPP5BP32019 993 aa20.63■□□□□ 0.89
PSEN1-212ENST00000555254 LIFRP42702 1097 aa20.63■□□□□ 0.89
PSEN1-212ENST00000555254 PLCD1P51178 756 aa20.63■□□□□ 0.89
PSEN1-212ENST00000555254 NECAB1Q8N987 351 aa20.63■□□□□ 0.89
PSEN1-212ENST00000555254 IGDCC4Q8TDY8 1250 aa20.63■□□□□ 0.89
PSEN1-212ENST00000555254 DYNLL2Q96FJ2 89 aa20.63■□□□□ 0.89
PSEN1-212ENST00000555254 WNK4Q96J92 1243 aa20.63■□□□□ 0.89
PSEN1-212ENST00000555254 SWAP70Q9UH65 585 aa20.63■□□□□ 0.89
PSEN1-212ENST00000555254 FAM196BA6NMK8 535 aa20.62■□□□□ 0.89
PSEN1-212ENST00000555254 CDK8P49336 464 aa20.62■□□□□ 0.89
PSEN1-212ENST00000555254 EVCP57679 992 aa20.62■□□□□ 0.89
PSEN1-212ENST00000555254 C16orf86Q6ZW13 317 aa20.62■□□□□ 0.89
PSEN1-212ENST00000555254 CNKSR2Q8WXI2 1034 aa20.62■□□□□ 0.89
PSEN1-212ENST00000555254 OPTNQ96CV9 577 aa20.62■□□□□ 0.89
PSEN1-212ENST00000555254 ZSCAN10Q96SZ4 725 aaPredicted RBP20.62■□□□□ 0.89
PSEN1-212ENST00000555254 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.62■□□□□ 0.89
PSEN1-212ENST00000555254 LARGE1O95461 756 aa20.61■□□□□ 0.89
PSEN1-212ENST00000555254 PDIA3P30101 505 aaKnown RBP20.61■□□□□ 0.89
PSEN1-212ENST00000555254 NUCB2P80303 420 aa20.61■□□□□ 0.89
PSEN1-212ENST00000555254 TFAP4Q01664 338 aa20.61■□□□□ 0.89
PSEN1-212ENST00000555254 CRACR2BQ8N4Y2 399 aaPredicted RBP20.61■□□□□ 0.89
PSEN1-212ENST00000555254 GPHNQ9NQX3 736 aaPredicted RBP20.61■□□□□ 0.89
PSEN1-212ENST00000555254 SLC12A7Q9Y666 1083 aa20.61■□□□□ 0.89
PSEN1-212ENST00000555254 SNCAIPQ9Y6H5 919 aa20.61■□□□□ 0.89
PSEN1-212ENST00000555254 GOLGA8BA8MQT2 603 aa20.6■□□□□ 0.89
PSEN1-212ENST00000555254 SMIM22K7EJ46 135 aa20.6■□□□□ 0.89
PSEN1-212ENST00000555254 TSPY3P0CV98 308 aa20.6■□□□□ 0.89
PSEN1-212ENST00000555254 TSPY8P0CW00 308 aa20.6■□□□□ 0.89
PSEN1-212ENST00000555254 GJA5P36382 358 aa20.6■□□□□ 0.89
PSEN1-212ENST00000555254 CPLX2Q6PUV4 134 aaKnown RBP20.6■□□□□ 0.89
PSEN1-212ENST00000555254 SGMS1Q86VZ5 419 aa20.6■□□□□ 0.89
PSEN1-212ENST00000555254 FOXP4Q8IVH2 680 aaPredicted RBP20.6■□□□□ 0.89
PSEN1-212ENST00000555254 GTF3C6Q969F1 213 aa20.6■□□□□ 0.89
PSEN1-212ENST00000555254 OTUD5Q96G74 571 aa20.6■□□□□ 0.89
PSEN1-212ENST00000555254 ZKSCAN3Q9BRR0 538 aa20.6■□□□□ 0.89
PSEN1-212ENST00000555254 LLPHQ9BRT6 129 aaKnown RBP20.6■□□□□ 0.89
PSEN1-212ENST00000555254 LY9Q9HBG7 655 aa20.6■□□□□ 0.89
PSEN1-212ENST00000555254 PI4KBQ9UBF8 816 aa20.6■□□□□ 0.89
PSEN1-212ENST00000555254 SERPINB13Q9UIV8 391 aa20.6■□□□□ 0.89
PSEN1-212ENST00000555254 ZNF112Q9UJU3 913 aa20.6■□□□□ 0.89
PSEN1-212ENST00000555254 ATRNL1Q5VV63 1379 aa20.59■□□□□ 0.89
PSEN1-212ENST00000555254 ZBTB43O43298 467 aa20.59■□□□□ 0.89
PSEN1-212ENST00000555254 FAM47AQ5JRC9 791 aa20.59■□□□□ 0.89
PSEN1-212ENST00000555254 IFIT1BQ5T764 474 aaKnown RBP20.59■□□□□ 0.89
PSEN1-212ENST00000555254 EHD4Q9H223 541 aa20.59■□□□□ 0.89
PSEN1-212ENST00000555254 TSKSQ9UJT2 592 aa20.59■□□□□ 0.89
PSEN1-212ENST00000555254 KIF3AQ9Y496 699 aa20.59■□□□□ 0.89
PSEN1-212ENST00000555254 BAZ2AQ9UIF9 1905 aaKnown RBP20.59■□□□□ 0.89
PSEN1-212ENST00000555254 TNKSO95271 1327 aa20.58■□□□□ 0.89
PSEN1-212ENST00000555254 CASP8AP2Q9UKL3 1982 aa20.58■□□□□ 0.89
PSEN1-212ENST00000555254 PHF20L1A8MW92 1017 aa20.58■□□□□ 0.89
PSEN1-212ENST00000555254 CPLX1O14810 134 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms