RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 FAM161BQ96MY7 647 aa7.52□□□□□ -1.21
GYPB-204ENST00000504951 AS3MTQ9HBK9 375 aa7.52□□□□□ -1.21
GYPB-204ENST00000504951 GNL3LQ9NVN8 582 aaKnown RBP7.52□□□□□ -1.21
GYPB-204ENST00000504951 RBPJLQ9UBG7 517 aa7.52□□□□□ -1.21
GYPB-204ENST00000504951 DENND2AQ9ULE3 1009 aa7.52□□□□□ -1.21
GYPB-204ENST00000504951 LOC285556D6RIA3 1793 aa7.51□□□□□ -1.21
GYPB-204ENST00000504951 AK9Q5TCS8 1911 aa7.51□□□□□ -1.21
GYPB-204ENST00000504951 GPR75-ASB3A0A0A6YYF3 556 aa7.51□□□□□ -1.21
GYPB-204ENST00000504951 BHMG1C9JSJ3 638 aaPredicted RBP7.51□□□□□ -1.21
GYPB-204ENST00000504951 F6X3S4 739 aa7.51□□□□□ -1.21
GYPB-204ENST00000504951 IGSF3O75054 1194 aa7.51□□□□□ -1.21
GYPB-204ENST00000504951 SLC5A1P13866 664 aa7.51□□□□□ -1.21
GYPB-204ENST00000504951 PRDX5P30044 214 aa7.51□□□□□ -1.21
GYPB-204ENST00000504951 CAP2P40123 477 aa7.51□□□□□ -1.21
GYPB-204ENST00000504951 BACE1P56817 501 aa7.51□□□□□ -1.21
GYPB-204ENST00000504951 PDE3AQ14432 1141 aa7.51□□□□□ -1.21
GYPB-204ENST00000504951 DIXDC1Q155Q3 683 aa7.51□□□□□ -1.21
GYPB-204ENST00000504951 LBX2Q6XYB7 198 aa7.51□□□□□ -1.21
GYPB-204ENST00000504951 SLC39A5Q6ZMH5 540 aa7.51□□□□□ -1.21
GYPB-204ENST00000504951 WDR63Q8IWG1 891 aa7.51□□□□□ -1.21
GYPB-204ENST00000504951 MYLIPQ8WY64 445 aa7.51□□□□□ -1.21
GYPB-204ENST00000504951 SUCLG2Q96I99 432 aa7.51□□□□□ -1.21
GYPB-204ENST00000504951 P2RX7Q99572 595 aaKnown RBP7.51□□□□□ -1.21
GYPB-204ENST00000504951 APBA2Q99767 749 aa7.51□□□□□ -1.21
GYPB-204ENST00000504951 C1QTNF1Q9BXJ1 281 aa7.51□□□□□ -1.21
GYPB-204ENST00000504951 SRCIN1Q9C0H9 1055 aa7.51□□□□□ -1.21
GYPB-204ENST00000504951 SENP6Q9GZR1 1112 aaPredicted RBP7.51□□□□□ -1.21
GYPB-204ENST00000504951 DDX20Q9UHI6 824 aaKnown RBP7.51□□□□□ -1.21
GYPB-204ENST00000504951 HERC5Q9UII4 1024 aaKnown RBP7.51□□□□□ -1.21
GYPB-204ENST00000504951 DOCK1Q14185 1865 aa7.51□□□□□ -1.21
GYPB-204ENST00000504951 PIEZO1Q92508 2521 aa7.5□□□□□ -1.21
GYPB-204ENST00000504951 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.5□□□□□ -1.21
GYPB-204ENST00000504951 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.5□□□□□ -1.21
GYPB-204ENST00000504951 SLC15A5A6NIM6 579 aa7.5□□□□□ -1.21
GYPB-204ENST00000504951 EYA2O00167 538 aa7.5□□□□□ -1.21
GYPB-204ENST00000504951 GLRX3O76003 335 aaKnown RBP7.5□□□□□ -1.21
GYPB-204ENST00000504951 NBPF7P0C2Y1 421 aaPredicted RBP7.5□□□□□ -1.21
GYPB-204ENST00000504951 CCND3P30281 292 aaPredicted RBP7.5□□□□□ -1.21
GYPB-204ENST00000504951 ZEB1P37275 1124 aaPredicted RBP7.5□□□□□ -1.21
GYPB-204ENST00000504951 HMGCS2P54868 508 aa7.5□□□□□ -1.21
GYPB-204ENST00000504951 RTP1P59025 263 aa7.5□□□□□ -1.21
GYPB-204ENST00000504951 HERVK_113P62684 666 aa7.5□□□□□ -1.21
GYPB-204ENST00000504951 ERVK-9P63128 1117 aa7.5□□□□□ -1.21
GYPB-204ENST00000504951 ERVK-24P63145 666 aa7.5□□□□□ -1.21
GYPB-204ENST00000504951 MAP3K12Q12852 859 aa7.5□□□□□ -1.21
GYPB-204ENST00000504951 MAP2K5Q13163 448 aa7.5□□□□□ -1.21
GYPB-204ENST00000504951 C9orf50Q5SZB4 431 aa7.5□□□□□ -1.21
GYPB-204ENST00000504951 MFSD14CQ5VZR4 134 aa7.5□□□□□ -1.21
GYPB-204ENST00000504951 GPR142Q7Z601 462 aa7.5□□□□□ -1.21
GYPB-204ENST00000504951 PLEKHH3Q7Z736 793 aa7.5□□□□□ -1.21
GYPB-204ENST00000504951 ANKRD44Q8N8A2 993 aa7.5□□□□□ -1.21
GYPB-204ENST00000504951 WNT2BQ93097 391 aa7.5□□□□□ -1.21
GYPB-204ENST00000504951 EDC3Q96F86 508 aaKnown RBP7.5□□□□□ -1.21
GYPB-204ENST00000504951 ASB2Q96Q27 587 aa7.5□□□□□ -1.21
GYPB-204ENST00000504951 ZBED2Q9BTP6 218 aa7.5□□□□□ -1.21
GYPB-204ENST00000504951 BICC1Q9H694 974 aaKnown RBP7.5□□□□□ -1.21
GYPB-204ENST00000504951 TXNRD2Q9NNW7 524 aa7.5□□□□□ -1.21
GYPB-204ENST00000504951 RABGAP1Q9Y3P9 1069 aa7.5□□□□□ -1.21
GYPB-204ENST00000504951 MAST2Q6P0Q8 1798 aa7.5□□□□□ -1.21
GYPB-204ENST00000504951 FANCIQ9NVI1 1328 aa7.5□□□□□ -1.21
GYPB-204ENST00000504951 CIAO1O76071 339 aa7.49□□□□□ -1.21
GYPB-204ENST00000504951 ASNSP08243 561 aa7.49□□□□□ -1.21
GYPB-204ENST00000504951 RFX5P48382 616 aaPredicted RBP7.49□□□□□ -1.21
GYPB-204ENST00000504951 RHBDL3P58872 404 aa7.49□□□□□ -1.21
GYPB-204ENST00000504951 IRX3P78415 501 aaPredicted RBP7.49□□□□□ -1.21
GYPB-204ENST00000504951 MRPS5P82675 430 aaKnown RBP7.49□□□□□ -1.21
GYPB-204ENST00000504951 Q3C1V9 767 aa7.49□□□□□ -1.21
GYPB-204ENST00000504951 SPTY2D1Q68D10 685 aaPredicted RBP7.49□□□□□ -1.21
GYPB-204ENST00000504951 ZSCAN29Q8IWY8 852 aaPredicted RBP7.49□□□□□ -1.21
GYPB-204ENST00000504951 ZDHHC16Q969W1 377 aa7.49□□□□□ -1.21
GYPB-204ENST00000504951 C12orf42Q96LP6 360 aa7.49□□□□□ -1.21
GYPB-204ENST00000504951 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.49□□□□□ -1.21
GYPB-204ENST00000504951 DDX4Q9NQI0 724 aaKnown RBP7.49□□□□□ -1.21
GYPB-204ENST00000504951 SALL2Q9Y467 1007 aaPredicted RBP7.49□□□□□ -1.21
GYPB-204ENST00000504951 TACC3Q9Y6A5 838 aa7.49□□□□□ -1.21
GYPB-204ENST00000504951 LTBP2Q14767 1821 aa7.49□□□□□ -1.21
GYPB-204ENST00000504951 DOCK2Q92608 1830 aa7.49□□□□□ -1.21
GYPB-204ENST00000504951 DNAH12Q6ZR08 3092 aa7.49□□□□□ -1.21
GYPB-204ENST00000504951 BDP1A6H8Y1 2624 aa7.48□□□□□ -1.21
GYPB-204ENST00000504951 RLFQ13129 1914 aa7.48□□□□□ -1.21
GYPB-204ENST00000504951 KIAA0355O15063 1070 aa7.48□□□□□ -1.21
GYPB-204ENST00000504951 CCNA1P78396 465 aa7.48□□□□□ -1.21
GYPB-204ENST00000504951 EXOSC9Q06265 439 aaKnown RBP7.48□□□□□ -1.21
GYPB-204ENST00000504951 GRIN2CQ14957 1233 aa7.48□□□□□ -1.21
GYPB-204ENST00000504951 CCL14Q16627 93 aa7.48□□□□□ -1.21
GYPB-204ENST00000504951 OLFML2BQ68BL8 750 aa7.48□□□□□ -1.21
GYPB-204ENST00000504951 ATG9AQ7Z3C6 839 aa7.48□□□□□ -1.21
GYPB-204ENST00000504951 FOXP4Q8IVH2 680 aaPredicted RBP7.48□□□□□ -1.21
GYPB-204ENST00000504951 BADQ92934 168 aa7.48□□□□□ -1.21
GYPB-204ENST00000504951 TOX2Q96NM4 488 aa7.48□□□□□ -1.21
GYPB-204ENST00000504951 DHX36Q9H2U1 1008 aaKnown RBP7.48□□□□□ -1.21
GYPB-204ENST00000504951 ZNF576Q9H609 170 aa7.48□□□□□ -1.21
GYPB-204ENST00000504951 PDLIM7Q9NR12 457 aa7.48□□□□□ -1.21
GYPB-204ENST00000504951 TMOD4Q9NZQ9 345 aa7.48□□□□□ -1.21
GYPB-204ENST00000504951 PI4KBQ9UBF8 816 aa7.48□□□□□ -1.21
GYPB-204ENST00000504951 NRBP1Q9UHY1 535 aa7.48□□□□□ -1.21
GYPB-204ENST00000504951 TRIM43BA6NCK2 446 aa7.47□□□□□ -1.21
GYPB-204ENST00000504951 USP17L10C9JJH3 530 aa7.47□□□□□ -1.21
GYPB-204ENST00000504951 SEPT4O43236 478 aa7.47□□□□□ -1.21
GYPB-204ENST00000504951 STRNO43815 780 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms