RNA–Protein interactions for RNA: ENST00000496262.1

RNF220-217, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 840 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-217ENST00000496262 ERVK-24P63145 666 aa13.2□□□□□ -0.3
RNF220-217ENST00000496262 EVX2Q03828 476 aa13.2□□□□□ -0.3
RNF220-217ENST00000496262 TTF1Q15361 905 aaPredicted RBP13.2□□□□□ -0.3
RNF220-217ENST00000496262 WDR78Q5VTH9 848 aa13.2□□□□□ -0.3
RNF220-217ENST00000496262 TATDN1Q6P1N9 297 aa13.2□□□□□ -0.3
RNF220-217ENST00000496262 ACER1Q8TDN7 264 aa13.2□□□□□ -0.3
RNF220-217ENST00000496262 KIF1BPQ96EK5 621 aa13.2□□□□□ -0.3
RNF220-217ENST00000496262 EDC3Q96F86 508 aaKnown RBP13.2□□□□□ -0.3
RNF220-217ENST00000496262 NUDT12Q9BQG2 462 aa13.2□□□□□ -0.3
RNF220-217ENST00000496262 EHD4Q9H223 541 aa13.2□□□□□ -0.3
RNF220-217ENST00000496262 PORCNQ9H237 461 aa13.2□□□□□ -0.3
RNF220-217ENST00000496262 HMX1Q9NP08 348 aaPredicted RBP13.2□□□□□ -0.3
RNF220-217ENST00000496262 RBPJLQ9UBG7 517 aa13.2□□□□□ -0.3
RNF220-217ENST00000496262 CEP290O15078 2479 aa13.19□□□□□ -0.3
RNF220-217ENST00000496262 RPTORQ8N122 1335 aa13.19□□□□□ -0.3
RNF220-217ENST00000496262 MAPK4P31152 587 aa13.19□□□□□ -0.3
RNF220-217ENST00000496262 SHMT1P34896 483 aa13.19□□□□□ -0.3
RNF220-217ENST00000496262 Q3C1V9 767 aa13.19□□□□□ -0.3
RNF220-217ENST00000496262 SDR42E1Q8WUS8 393 aa13.19□□□□□ -0.3
RNF220-217ENST00000496262 SOCS4Q8WXH5 440 aa13.19□□□□□ -0.3
RNF220-217ENST00000496262 CRNKL1Q9BZJ0 848 aaKnown RBP13.19□□□□□ -0.3
RNF220-217ENST00000496262 CRISPLD2Q9H0B8 497 aa13.19□□□□□ -0.3
RNF220-217ENST00000496262 CABP5Q9NP86 173 aa13.19□□□□□ -0.3
RNF220-217ENST00000496262 MCM9Q9NXL9 1143 aa13.19□□□□□ -0.3
RNF220-217ENST00000496262 DDX19BQ9UMR2 479 aa13.19□□□□□ -0.3
RNF220-217ENST00000496262 MYH1P12882 1939 aa13.19□□□□□ -0.3
RNF220-217ENST00000496262 USP17L15C9J2P7 530 aa13.18□□□□□ -0.3
RNF220-217ENST00000496262 USP17L13C9JLJ4 530 aa13.18□□□□□ -0.3
RNF220-217ENST00000496262 USP17L11C9JVI0 530 aa13.18□□□□□ -0.3
RNF220-217ENST00000496262 USP17L18D6R9N7 530 aa13.18□□□□□ -0.3
RNF220-217ENST00000496262 USP17L22D6RA61 530 aa13.18□□□□□ -0.3
RNF220-217ENST00000496262 USP17L17D6RBQ6 530 aa13.18□□□□□ -0.3
RNF220-217ENST00000496262 USP17L19D6RCP7 530 aa13.18□□□□□ -0.3
RNF220-217ENST00000496262 USP17L20D6RJB6 530 aa13.18□□□□□ -0.3
RNF220-217ENST00000496262 CYP2D6P10635 497 aa13.18□□□□□ -0.3
RNF220-217ENST00000496262 ZKSCAN1P17029 563 aaPredicted RBP13.18□□□□□ -0.3
RNF220-217ENST00000496262 VCAM1P19320 739 aa13.18□□□□□ -0.3
RNF220-217ENST00000496262 USP14P54578 494 aa13.18□□□□□ -0.3
RNF220-217ENST00000496262 USP17L24Q0WX57 530 aa13.18□□□□□ -0.3
RNF220-217ENST00000496262 SLFNL1Q499Z3 407 aa13.18□□□□□ -0.3
RNF220-217ENST00000496262 POTEEQ6S8J3 1075 aa13.18□□□□□ -0.3
RNF220-217ENST00000496262 GPR142Q7Z601 462 aa13.18□□□□□ -0.3
RNF220-217ENST00000496262 NECAB2Q7Z6G3 386 aa13.18□□□□□ -0.3
RNF220-217ENST00000496262 SIRT2Q8IXJ6 389 aa13.18□□□□□ -0.3
RNF220-217ENST00000496262 RPAP2Q8IXW5 612 aaPredicted RBP13.18□□□□□ -0.3
RNF220-217ENST00000496262 C7orf61Q8IZ16 206 aa13.18□□□□□ -0.3
RNF220-217ENST00000496262 LCORLQ8N3X6 602 aa13.18□□□□□ -0.3
RNF220-217ENST00000496262 ARMT1Q9H993 441 aa13.18□□□□□ -0.3
RNF220-217ENST00000496262 NAV1Q8NEY1 1877 aa13.17□□□□□ -0.3
RNF220-217ENST00000496262 SEPT2Q15019 361 aa13.17□□□□□ -0.3
RNF220-217ENST00000496262 CCL14Q16627 93 aa13.17□□□□□ -0.3
RNF220-217ENST00000496262 PLEKHH3Q7Z736 793 aa13.17□□□□□ -0.3
RNF220-217ENST00000496262 SLC44A5Q8NCS7 719 aa13.17□□□□□ -0.3
RNF220-217ENST00000496262 GTF3C2Q8WUA4 911 aaPredicted RBP13.17□□□□□ -0.3
RNF220-217ENST00000496262 BOLA2Q9H3K6 86 aa13.17□□□□□ -0.3
RNF220-217ENST00000496262 RPAP3Q9H6T3 665 aaPredicted RBP13.17□□□□□ -0.3
RNF220-217ENST00000496262 ZBTB40Q9NUA8 1239 aa13.17□□□□□ -0.3
RNF220-217ENST00000496262 DOCK3Q8IZD9 2030 aa13.17□□□□□ -0.3
RNF220-217ENST00000496262 RANBP2P49792 3224 aaKnown RBP13.17□□□□□ -0.3
RNF220-217ENST00000496262 DDX60LQ5H9U9 1706 aaKnown RBP13.16□□□□□ -0.3
RNF220-217ENST00000496262 PLXNB2O15031 1838 aa13.16□□□□□ -0.3
RNF220-217ENST00000496262 TCRBV5S4A2TA0A5A2 114 aa13.16□□□□□ -0.3
RNF220-217ENST00000496262 PRKAB2O43741 272 aa13.16□□□□□ -0.3
RNF220-217ENST00000496262 CNMDO75829 334 aa13.16□□□□□ -0.3
RNF220-217ENST00000496262 MBD4O95243 580 aa13.16□□□□□ -0.3
RNF220-217ENST00000496262 GUCY1A2P33402 732 aa13.16□□□□□ -0.3
RNF220-217ENST00000496262 RGS2P41220 211 aa13.16□□□□□ -0.3
RNF220-217ENST00000496262 TMED8Q6PL24 325 aaPredicted RBP13.16□□□□□ -0.3
RNF220-217ENST00000496262 DYNLL2Q96FJ2 89 aa13.16□□□□□ -0.3
RNF220-217ENST00000496262 C12orf42Q96LP6 360 aa13.16□□□□□ -0.3
RNF220-217ENST00000496262 APBA2Q99767 749 aa13.16□□□□□ -0.3
RNF220-217ENST00000496262 KIAA1683Q9H0B3 1180 aa13.16□□□□□ -0.3
RNF220-217ENST00000496262 DCP1AQ9NPI6 582 aaPredicted RBP13.16□□□□□ -0.3
RNF220-217ENST00000496262 PAG1Q9NWQ8 432 aa13.16□□□□□ -0.3
RNF220-217ENST00000496262 ZBTB47Q9UFB7 747 aaPredicted RBP13.16□□□□□ -0.3
RNF220-217ENST00000496262 RCAN3Q9UKA8 241 aa13.16□□□□□ -0.3
RNF220-217ENST00000496262 RABGAP1Q9Y3P9 1069 aa13.16□□□□□ -0.3
RNF220-217ENST00000496262 TRIOBPQ9H2D6 2365 aa13.15□□□□□ -0.3
RNF220-217ENST00000496262 RAB11FIP3O75154 756 aa13.15□□□□□ -0.3
RNF220-217ENST00000496262 CHGBP05060 677 aa13.15□□□□□ -0.3
RNF220-217ENST00000496262 XRCC5P13010 732 aaKnown RBP13.15□□□□□ -0.3
RNF220-217ENST00000496262 CCND3P30281 292 aaPredicted RBP13.15□□□□□ -0.3
RNF220-217ENST00000496262 CCNA1P78396 465 aa13.15□□□□□ -0.3
RNF220-217ENST00000496262 CACNB2Q08289 660 aaPredicted RBP13.15□□□□□ -0.3
RNF220-217ENST00000496262 MORN1Q5T089 497 aa13.15□□□□□ -0.3
RNF220-217ENST00000496262 MAP3K21Q5TCX8 1036 aa13.15□□□□□ -0.3
RNF220-217ENST00000496262 C20orf194Q5TEA3 1177 aa13.15□□□□□ -0.3
RNF220-217ENST00000496262 SAMD1Q6SPF0 538 aaPredicted RBP13.15□□□□□ -0.3
RNF220-217ENST00000496262 CATSPERGQ6ZRH7 1159 aa13.15□□□□□ -0.3
RNF220-217ENST00000496262 CLEC10AQ8IUN9 316 aa13.15□□□□□ -0.3
RNF220-217ENST00000496262 ANKLE1Q8NAG6 615 aa13.15□□□□□ -0.3
RNF220-217ENST00000496262 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.15□□□□□ -0.3
RNF220-217ENST00000496262 TANGO6Q9C0B7 1094 aa13.15□□□□□ -0.3
RNF220-217ENST00000496262 NBPF3Q9H094 633 aa13.15□□□□□ -0.3
RNF220-217ENST00000496262 C11orf49Q9H6J7 331 aa13.15□□□□□ -0.3
RNF220-217ENST00000496262 STAP2Q9UGK3 403 aa13.15□□□□□ -0.3
RNF220-217ENST00000496262 ZMYND8Q9ULU4 1186 aaPredicted RBP13.15□□□□□ -0.3
RNF220-217ENST00000496262 CYP2D7A0A087X1C5 515 aa13.14□□□□□ -0.31
RNF220-217ENST00000496262 A0A1W2PRG0 241 aa13.14□□□□□ -0.31
RNF220-217ENST00000496262 SPDYE16A6NNV3 312 aaPredicted RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms