RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 ZNF428Q96B54 188 aa7.6□□□□□ -1.19
SMC4-218ENST00000486711 LIN37Q96GY3 246 aaPredicted RBP7.6□□□□□ -1.19
SMC4-218ENST00000486711 C19orf73Q9NVV2 129 aa7.6□□□□□ -1.19
SMC4-218ENST00000486711 ZSWIM5Q9P217 1185 aa7.6□□□□□ -1.19
SMC4-218ENST00000486711 PARP2Q9UGN5 583 aa7.6□□□□□ -1.19
SMC4-218ENST00000486711 DAB2P98082 770 aa7.59□□□□□ -1.19
SMC4-218ENST00000486711 TAF1CQ15572 869 aaPredicted RBP7.59□□□□□ -1.19
SMC4-218ENST00000486711 TMPRSS7Q7RTY8 843 aa7.59□□□□□ -1.19
SMC4-218ENST00000486711 GIPC2Q8TF65 315 aa7.59□□□□□ -1.19
SMC4-218ENST00000486711 CCDC84Q86UT8 332 aaPredicted RBP7.58□□□□□ -1.2
SMC4-218ENST00000486711 JARID2Q92833 1246 aaPredicted RBP7.58□□□□□ -1.2
SMC4-218ENST00000486711 ACSF2Q96CM8 615 aaPredicted RBP7.58□□□□□ -1.2
SMC4-218ENST00000486711 PPP1R16BQ96T49 567 aa7.58□□□□□ -1.2
SMC4-218ENST00000486711 SLAMF8Q9P0V8 285 aa7.58□□□□□ -1.2
SMC4-218ENST00000486711 TLR6Q9Y2C9 796 aa7.58□□□□□ -1.2
SMC4-218ENST00000486711 RAC2P15153 192 aa7.57□□□□□ -1.2
SMC4-218ENST00000486711 XPCQ01831 940 aaPredicted RBP7.57□□□□□ -1.2
SMC4-218ENST00000486711 PHC3Q8NDX5 983 aa7.57□□□□□ -1.2
SMC4-218ENST00000486711 DNAJB8Q8NHS0 232 aa7.57□□□□□ -1.2
SMC4-218ENST00000486711 BPNT1O95861 308 aa7.56□□□□□ -1.2
SMC4-218ENST00000486711 LCE1DQ5T752 114 aa7.56□□□□□ -1.2
SMC4-218ENST00000486711 PRR23BQ6ZRT6 265 aa7.56□□□□□ -1.2
SMC4-218ENST00000486711 TMC4Q7Z404 712 aa7.56□□□□□ -1.2
SMC4-218ENST00000486711 TTC6Q86TZ1 520 aa7.56□□□□□ -1.2
SMC4-218ENST00000486711 CYB5D2Q8WUJ1 264 aa7.56□□□□□ -1.2
SMC4-218ENST00000486711 TRIT1Q9H3H1 467 aaKnown RBP7.56□□□□□ -1.2
SMC4-218ENST00000486711 CEP131Q9UPN4 1083 aa7.56□□□□□ -1.2
SMC4-218ENST00000486711 USP31Q70CQ4 1352 aa7.56□□□□□ -1.2
SMC4-218ENST00000486711 TSPAN15O95858 294 aa7.55□□□□□ -1.2
SMC4-218ENST00000486711 ESR1P03372 595 aa7.55□□□□□ -1.2
SMC4-218ENST00000486711 ZNF16P17020 682 aaPredicted RBP7.55□□□□□ -1.2
SMC4-218ENST00000486711 PLCG1P19174 1290 aa7.55□□□□□ -1.2
SMC4-218ENST00000486711 RAP1GAPP47736 663 aa7.55□□□□□ -1.2
SMC4-218ENST00000486711 FAM13CQ8NE31 585 aa7.55□□□□□ -1.2
SMC4-218ENST00000486711 Q96M66 194 aa7.55□□□□□ -1.2
SMC4-218ENST00000486711 TMEM59LQ9UK28 342 aa7.55□□□□□ -1.2
SMC4-218ENST00000486711 CTSHP09668 335 aa7.54□□□□□ -1.2
SMC4-218ENST00000486711 YARSP54577 528 aaKnown RBP7.54□□□□□ -1.2
SMC4-218ENST00000486711 TAGLNQ01995 201 aaKnown RBP7.54□□□□□ -1.2
SMC4-218ENST00000486711 CREG2Q8IUH2 290 aa7.54□□□□□ -1.2
SMC4-218ENST00000486711 CRELD1Q96HD1 420 aa7.54□□□□□ -1.2
SMC4-218ENST00000486711 KCNH3Q9ULD8 1083 aa7.54□□□□□ -1.2
SMC4-218ENST00000486711 CORINQ9Y5Q5 1042 aa7.54□□□□□ -1.2
SMC4-218ENST00000486711 DNAJC25-GNG10A0A024R161 153 aa7.53□□□□□ -1.2
SMC4-218ENST00000486711 CILPO75339 1184 aa7.53□□□□□ -1.2
SMC4-218ENST00000486711 TPP2P29144 1249 aaPredicted RBP7.53□□□□□ -1.2
SMC4-218ENST00000486711 LMNB2Q03252 620 aa7.53□□□□□ -1.2
SMC4-218ENST00000486711 KRTAP19-4Q3LI73 84 aa7.53□□□□□ -1.2
SMC4-218ENST00000486711 RALGPS1Q5JS13 557 aa7.53□□□□□ -1.2
SMC4-218ENST00000486711 TMEM201Q5SNT2 666 aa7.53□□□□□ -1.2
SMC4-218ENST00000486711 BNC2Q6ZN30 1099 aaPredicted RBP7.53□□□□□ -1.2
SMC4-218ENST00000486711 SYDE1Q6ZW31 735 aaPredicted RBP7.53□□□□□ -1.2
SMC4-218ENST00000486711 FBXO15Q8NCQ5 510 aaPredicted RBP7.53□□□□□ -1.2
SMC4-218ENST00000486711 ABHD4Q8TB40 342 aa7.53□□□□□ -1.2
SMC4-218ENST00000486711 PPP1R13LQ8WUF5 828 aa7.53□□□□□ -1.2
SMC4-218ENST00000486711 TOX2Q96NM4 488 aa7.53□□□□□ -1.2
SMC4-218ENST00000486711 DUSP15Q9H1R2 295 aaPredicted RBP7.53□□□□□ -1.2
SMC4-218ENST00000486711 GPATCH2Q9NW75 528 aa7.53□□□□□ -1.2
SMC4-218ENST00000486711 CAMK2GQ13555 558 aaPredicted RBP7.52□□□□□ -1.21
SMC4-218ENST00000486711 SPOCD1Q6ZMY3 1216 aa7.52□□□□□ -1.21
SMC4-218ENST00000486711 FBXO33Q7Z6M2 555 aa7.52□□□□□ -1.21
SMC4-218ENST00000486711 GATAD2BQ8WXI9 593 aa7.52□□□□□ -1.21
SMC4-218ENST00000486711 MRRFQ96E11 262 aaKnown RBP7.52□□□□□ -1.21
SMC4-218ENST00000486711 GPR62Q9BZJ7 368 aa7.52□□□□□ -1.21
SMC4-218ENST00000486711 NSUN3Q9H649 340 aaKnown RBP7.52□□□□□ -1.21
SMC4-218ENST00000486711 FAM221AA4D161 298 aa7.51□□□□□ -1.21
SMC4-218ENST00000486711 RBAK-RBAKDNI3L0D1 243 aa7.51□□□□□ -1.21
SMC4-218ENST00000486711 SORBS3O60504 671 aa7.51□□□□□ -1.21
SMC4-218ENST00000486711 ITGAEP38570 1179 aa7.51□□□□□ -1.21
SMC4-218ENST00000486711 HK2P52789 917 aa7.51□□□□□ -1.21
SMC4-218ENST00000486711 GAB4Q2WGN9 574 aa7.51□□□□□ -1.21
SMC4-218ENST00000486711 FBLN7Q53RD9 439 aa7.51□□□□□ -1.21
SMC4-218ENST00000486711 DTWD2Q8NBA8 298 aa7.51□□□□□ -1.21
SMC4-218ENST00000486711 RNF141Q8WVD5 230 aa7.51□□□□□ -1.21
SMC4-218ENST00000486711 MYLIPQ8WY64 445 aa7.51□□□□□ -1.21
SMC4-218ENST00000486711 FAM161BQ96MY7 647 aa7.51□□□□□ -1.21
SMC4-218ENST00000486711 DIRC2Q96SL1 478 aa7.51□□□□□ -1.21
SMC4-218ENST00000486711 DUSP13Q9UII6 198 aa7.51□□□□□ -1.21
SMC4-218ENST00000486711 UNCXA6NJT0 531 aa7.5□□□□□ -1.21
SMC4-218ENST00000486711 WASH4PA8MWX3 477 aa7.5□□□□□ -1.21
SMC4-218ENST00000486711 UPK3BL1B0FP48 263 aa7.5□□□□□ -1.21
SMC4-218ENST00000486711 UPK3BL2E5RIL1 263 aa7.5□□□□□ -1.21
SMC4-218ENST00000486711 F13A1P00488 732 aa7.5□□□□□ -1.21
SMC4-218ENST00000486711 PF4P02776 101 aa7.5□□□□□ -1.21
SMC4-218ENST00000486711 HPXP02790 462 aa7.5□□□□□ -1.21
SMC4-218ENST00000486711 SRFP11831 508 aa7.5□□□□□ -1.21
SMC4-218ENST00000486711 PWP1Q13610 501 aa7.5□□□□□ -1.21
SMC4-218ENST00000486711 TSPYL5Q86VY4 417 aaPredicted RBP7.5□□□□□ -1.21
SMC4-218ENST00000486711 CILP2Q8IUL8 1156 aa7.5□□□□□ -1.21
SMC4-218ENST00000486711 RELL1Q8IUW5 271 aa7.5□□□□□ -1.21
SMC4-218ENST00000486711 SLFN12Q8IYM2 578 aa7.5□□□□□ -1.21
SMC4-218ENST00000486711 RHOVQ96L33 236 aa7.5□□□□□ -1.21
SMC4-218ENST00000486711 MRS2Q9HD23 443 aa7.5□□□□□ -1.21
SMC4-218ENST00000486711 F6X3S4 739 aa7.49□□□□□ -1.21
SMC4-218ENST00000486711 NFIBO00712 420 aa7.49□□□□□ -1.21
SMC4-218ENST00000486711 GBP2P32456 591 aaPredicted RBP7.49□□□□□ -1.21
SMC4-218ENST00000486711 TNNI2P48788 182 aa7.49□□□□□ -1.21
SMC4-218ENST00000486711 EGR3Q06889 387 aa7.49□□□□□ -1.21
SMC4-218ENST00000486711 ANKLE2Q86XL3 938 aa7.49□□□□□ -1.21
SMC4-218ENST00000486711 ZSCAN18Q8TBC5 510 aaPredicted RBP7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms