RNA–Protein interactions for RNA: ENST00000471511.1

RPRD1B-204, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 4

Gene RPRD1B, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-204ENST00000471511 TSHZ3Q63HK5 1081 aa11.87□□□□□ -0.51
RPRD1B-204ENST00000471511 CLEC10AQ8IUN9 316 aa11.87□□□□□ -0.51
RPRD1B-204ENST00000471511 TRIB2Q92519 343 aa11.87□□□□□ -0.51
RPRD1B-204ENST00000471511 C12orf42Q96LP6 360 aa11.87□□□□□ -0.51
RPRD1B-204ENST00000471511 CRISPLD2Q9H0B8 497 aa11.87□□□□□ -0.51
RPRD1B-204ENST00000471511 MYH1P12882 1939 aa11.87□□□□□ -0.51
RPRD1B-204ENST00000471511 RANBP2P49792 3224 aaKnown RBP11.86□□□□□ -0.51
RPRD1B-204ENST00000471511 MBD4O95243 580 aa11.86□□□□□ -0.51
RPRD1B-204ENST00000471511 MS4A1P11836 297 aa11.86□□□□□ -0.51
RPRD1B-204ENST00000471511 UBXN2AP68543 259 aa11.86□□□□□ -0.51
RPRD1B-204ENST00000471511 IRX3P78415 501 aaPredicted RBP11.86□□□□□ -0.51
RPRD1B-204ENST00000471511 ABCB5Q2M3G0 1257 aa11.86□□□□□ -0.51
RPRD1B-204ENST00000471511 USP17L2Q6R6M4 530 aa11.86□□□□□ -0.51
RPRD1B-204ENST00000471511 CATSPERGQ6ZRH7 1159 aa11.86□□□□□ -0.51
RPRD1B-204ENST00000471511 COA7Q96BR5 231 aa11.86□□□□□ -0.51
RPRD1B-204ENST00000471511 HAUS7Q99871 368 aa11.86□□□□□ -0.51
RPRD1B-204ENST00000471511 GINM1Q9NU53 330 aa11.86□□□□□ -0.51
RPRD1B-204ENST00000471511 PAG1Q9NWQ8 432 aa11.86□□□□□ -0.51
RPRD1B-204ENST00000471511 MCM9Q9NXL9 1143 aa11.86□□□□□ -0.51
RPRD1B-204ENST00000471511 TMOD4Q9NZQ9 345 aa11.86□□□□□ -0.51
RPRD1B-204ENST00000471511 BTBD7Q9P203 1132 aa11.86□□□□□ -0.51
RPRD1B-204ENST00000471511 HMMRO75330 724 aa11.85□□□□□ -0.51
RPRD1B-204ENST00000471511 POLR3DP05423 398 aaPredicted RBP11.85□□□□□ -0.51
RPRD1B-204ENST00000471511 AKR1B1P15121 316 aa11.85□□□□□ -0.51
RPRD1B-204ENST00000471511 VCAM1P19320 739 aa11.85□□□□□ -0.51
RPRD1B-204ENST00000471511 FXR1P51114 621 aaKnown RBP eCLIP11.85□□□□□ -0.51
RPRD1B-204ENST00000471511 ERVK-9P63128 1117 aa11.85□□□□□ -0.51
RPRD1B-204ENST00000471511 ERVK-24P63145 666 aa11.85□□□□□ -0.51
RPRD1B-204ENST00000471511 PABPC4Q13310 644 aaKnown RBP eCLIP11.85□□□□□ -0.51
RPRD1B-204ENST00000471511 PDE3AQ14432 1141 aa11.85□□□□□ -0.51
RPRD1B-204ENST00000471511 TTF1Q15361 905 aaPredicted RBP11.85□□□□□ -0.51
RPRD1B-204ENST00000471511 MORN1Q5T089 497 aa11.85□□□□□ -0.51
RPRD1B-204ENST00000471511 TTC6Q86TZ1 520 aa11.85□□□□□ -0.51
RPRD1B-204ENST00000471511 GPRC5AQ8NFJ5 357 aa11.85□□□□□ -0.51
RPRD1B-204ENST00000471511 PAGR1Q9BTK6 254 aa11.85□□□□□ -0.51
RPRD1B-204ENST00000471511 TRIM34Q9BYJ4 488 aa11.85□□□□□ -0.51
RPRD1B-204ENST00000471511 KIAA1683Q9H0B3 1180 aa11.85□□□□□ -0.51
RPRD1B-204ENST00000471511 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.85□□□□□ -0.51
RPRD1B-204ENST00000471511 PUS7LQ9H0K6 701 aaKnown RBP11.85□□□□□ -0.51
RPRD1B-204ENST00000471511 FLRT1Q9NZU1 646 aa11.85□□□□□ -0.51
RPRD1B-204ENST00000471511 PCDHB15Q9Y5E8 787 aa11.85□□□□□ -0.51
RPRD1B-204ENST00000471511 SZT2Q5T011 3432 aa11.84□□□□□ -0.51
RPRD1B-204ENST00000471511 FARP2O94887 1054 aaPredicted RBP11.84□□□□□ -0.51
RPRD1B-204ENST00000471511 TFRCP02786 760 aaKnown RBP11.84□□□□□ -0.51
RPRD1B-204ENST00000471511 MAP3K21Q5TCX8 1036 aa11.84□□□□□ -0.51
RPRD1B-204ENST00000471511 GPR142Q7Z601 462 aa11.84□□□□□ -0.51
RPRD1B-204ENST00000471511 OTUD7AQ8TE49 926 aaPredicted RBP11.84□□□□□ -0.51
RPRD1B-204ENST00000471511 DPF3Q92784 378 aa11.84□□□□□ -0.51
RPRD1B-204ENST00000471511 PAWRQ96IZ0 340 aaKnown RBP11.84□□□□□ -0.51
RPRD1B-204ENST00000471511 CRNKL1Q9BZJ0 848 aaKnown RBP11.84□□□□□ -0.51
RPRD1B-204ENST00000471511 PRO3102Q9H379 93 aa11.84□□□□□ -0.51
RPRD1B-204ENST00000471511 DCTPP1Q9H773 170 aa11.84□□□□□ -0.51
RPRD1B-204ENST00000471511 TRIOBPQ9H2D6 2365 aa11.83□□□□□ -0.52
RPRD1B-204ENST00000471511 SPDYE16A6NNV3 312 aaPredicted RBP11.83□□□□□ -0.52
RPRD1B-204ENST00000471511 USP17L15C9J2P7 530 aa11.83□□□□□ -0.52
RPRD1B-204ENST00000471511 USP17L13C9JLJ4 530 aa11.83□□□□□ -0.52
RPRD1B-204ENST00000471511 USP17L11C9JVI0 530 aa11.83□□□□□ -0.52
RPRD1B-204ENST00000471511 USP17L18D6R9N7 530 aa11.83□□□□□ -0.52
RPRD1B-204ENST00000471511 USP17L22D6RA61 530 aa11.83□□□□□ -0.52
RPRD1B-204ENST00000471511 USP17L17D6RBQ6 530 aa11.83□□□□□ -0.52
RPRD1B-204ENST00000471511 USP17L19D6RCP7 530 aa11.83□□□□□ -0.52
RPRD1B-204ENST00000471511 USP17L20D6RJB6 530 aa11.83□□□□□ -0.52
RPRD1B-204ENST00000471511 CACNB2Q08289 660 aaPredicted RBP11.83□□□□□ -0.52
RPRD1B-204ENST00000471511 USP17L24Q0WX57 530 aa11.83□□□□□ -0.52
RPRD1B-204ENST00000471511 C12orf60Q5U649 245 aa11.83□□□□□ -0.52
RPRD1B-204ENST00000471511 CHRDL2Q6WN34 429 aa11.83□□□□□ -0.52
RPRD1B-204ENST00000471511 NKX2-3Q8TAU0 364 aa11.83□□□□□ -0.52
RPRD1B-204ENST00000471511 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.83□□□□□ -0.52
RPRD1B-204ENST00000471511 LRRCC1Q9C099 1032 aa11.83□□□□□ -0.52
RPRD1B-204ENST00000471511 RPAP3Q9H6T3 665 aaPredicted RBP11.83□□□□□ -0.52
RPRD1B-204ENST00000471511 RBM27Q9P2N5 1060 aaKnown RBP11.83□□□□□ -0.52
RPRD1B-204ENST00000471511 USP17L12C9JPN9 530 aa11.82□□□□□ -0.52
RPRD1B-204ENST00000471511 USP17L21D6R901 530 aa11.82□□□□□ -0.52
RPRD1B-204ENST00000471511 IGHA2P01877 340 aa11.82□□□□□ -0.52
RPRD1B-204ENST00000471511 HMGCRP04035 888 aa11.82□□□□□ -0.52
RPRD1B-204ENST00000471511 CCND3P30281 292 aaPredicted RBP11.82□□□□□ -0.52
RPRD1B-204ENST00000471511 LHX8Q68G74 356 aa11.82□□□□□ -0.52
RPRD1B-204ENST00000471511 CTR9Q6PD62 1173 aa11.82□□□□□ -0.52
RPRD1B-204ENST00000471511 TMED8Q6PL24 325 aaPredicted RBP11.82□□□□□ -0.52
RPRD1B-204ENST00000471511 CERS3Q8IU89 383 aa11.82□□□□□ -0.52
RPRD1B-204ENST00000471511 NPLOC4Q8TAT6 608 aa11.82□□□□□ -0.52
RPRD1B-204ENST00000471511 OSBP2Q969R2 916 aa11.82□□□□□ -0.52
RPRD1B-204ENST00000471511 NAV1Q8NEY1 1877 aa11.82□□□□□ -0.52
RPRD1B-204ENST00000471511 RPTORQ8N122 1335 aa11.82□□□□□ -0.52
RPRD1B-204ENST00000471511 MPHOSPH10O00566 681 aaKnown RBP11.81□□□□□ -0.52
RPRD1B-204ENST00000471511 PRKAR2AP13861 404 aaKnown RBP11.81□□□□□ -0.52
RPRD1B-204ENST00000471511 CDK8P49336 464 aa11.81□□□□□ -0.52
RPRD1B-204ENST00000471511 UBE3CQ15386 1083 aa11.81□□□□□ -0.52
RPRD1B-204ENST00000471511 PLEKHH3Q7Z736 793 aa11.81□□□□□ -0.52
RPRD1B-204ENST00000471511 STRBPQ96SI9 672 aaKnown RBP11.81□□□□□ -0.52
RPRD1B-204ENST00000471511 FEZ1Q99689 392 aa11.81□□□□□ -0.52
RPRD1B-204ENST00000471511 NUDT12Q9BQG2 462 aa11.81□□□□□ -0.52
RPRD1B-204ENST00000471511 CABP5Q9NP86 173 aa11.81□□□□□ -0.52
RPRD1B-204ENST00000471511 RABGAP1Q9Y3P9 1069 aa11.81□□□□□ -0.52
RPRD1B-204ENST00000471511 RLFQ13129 1914 aa11.8□□□□□ -0.52
RPRD1B-204ENST00000471511 ALPK3Q96L96 1907 aa11.8□□□□□ -0.52
RPRD1B-204ENST00000471511 GSG1L2A8MUP6 293 aa11.8□□□□□ -0.52
RPRD1B-204ENST00000471511 XRCC5P13010 732 aaKnown RBP11.8□□□□□ -0.52
RPRD1B-204ENST00000471511 PTPREP23469 700 aa11.8□□□□□ -0.52
RPRD1B-204ENST00000471511 MAPK4P31152 587 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms