RNA–Protein interactions for RNA: ENST00000364700.1

RNU4-56P-201, Transcript of RNA, U4 small nuclear 56, pseudogene, humanhuman

BASIC

Gene RNU4-56P, Length 142 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-56P-201ENST00000364700 HCLS1P14317 486 aaPredicted RBP3.9□□□□□ -1.79
RNU4-56P-201ENST00000364700 CFPP27918 469 aa3.9□□□□□ -1.79
RNU4-56P-201ENST00000364700 AFMP43652 599 aa3.9□□□□□ -1.79
RNU4-56P-201ENST00000364700 IKZF1Q13422 519 aa3.9□□□□□ -1.79
RNU4-56P-201ENST00000364700 MLANAQ16655 118 aa3.9□□□□□ -1.79
RNU4-56P-201ENST00000364700 LLGL2Q6P1M3 1020 aa3.9□□□□□ -1.79
RNU4-56P-201ENST00000364700 FAM214BQ7L5A3 538 aa3.9□□□□□ -1.79
RNU4-56P-201ENST00000364700 GOLM1Q8NBJ4 401 aa3.9□□□□□ -1.79
RNU4-56P-201ENST00000364700 GPBAR1Q8TDU6 330 aa3.9□□□□□ -1.79
RNU4-56P-201ENST00000364700 SEC16BQ96JE7 1060 aa3.9□□□□□ -1.79
RNU4-56P-201ENST00000364700 CAPN10Q9HC96 672 aa3.9□□□□□ -1.79
RNU4-56P-201ENST00000364700 GTF2IRD1Q9UHL9 959 aa3.9□□□□□ -1.79
RNU4-56P-201ENST00000364700 RAPGEFL1Q9UHV5 662 aa3.9□□□□□ -1.79
RNU4-56P-201ENST00000364700 CTNND2Q9UQB3 1225 aa3.9□□□□□ -1.79
RNU4-56P-201ENST00000364700 POLR3KQ9Y2Y1 108 aaPredicted RBP3.9□□□□□ -1.79
RNU4-56P-201ENST00000364700 SUPT16HQ9Y5B9 1047 aaKnown RBP3.9□□□□□ -1.79
RNU4-56P-201ENST00000364700 ATE1O95260 518 aa3.89□□□□□ -1.79
RNU4-56P-201ENST00000364700 ITIH2P19823 946 aa3.89□□□□□ -1.79
RNU4-56P-201ENST00000364700 CLCN7P51798 805 aa3.89□□□□□ -1.79
RNU4-56P-201ENST00000364700 ERVK-24P63145 666 aa3.89□□□□□ -1.79
RNU4-56P-201ENST00000364700 ZP2Q05996 745 aa3.89□□□□□ -1.79
RNU4-56P-201ENST00000364700 RBL2Q08999 1139 aa3.89□□□□□ -1.79
RNU4-56P-201ENST00000364700 MPP2Q14168 576 aa3.89□□□□□ -1.79
RNU4-56P-201ENST00000364700 INPP5AQ14642 412 aa3.89□□□□□ -1.79
RNU4-56P-201ENST00000364700 ZC3H12AQ5D1E8 599 aaKnown RBP3.89□□□□□ -1.79
RNU4-56P-201ENST00000364700 LILRA6Q6PI73 481 aa3.89□□□□□ -1.79
RNU4-56P-201ENST00000364700 CYFIP1Q7L576 1253 aa3.89□□□□□ -1.79
RNU4-56P-201ENST00000364700 REC114Q7Z4M0 266 aa3.89□□□□□ -1.79
RNU4-56P-201ENST00000364700 ANKLE2Q86XL3 938 aa3.89□□□□□ -1.79
RNU4-56P-201ENST00000364700 C1QL4Q86Z23 238 aa3.89□□□□□ -1.79
RNU4-56P-201ENST00000364700 PHF6Q8IWS0 365 aaKnown RBP eCLIP3.89□□□□□ -1.79
RNU4-56P-201ENST00000364700 SPACA3Q8IXA5 215 aa3.89□□□□□ -1.79
RNU4-56P-201ENST00000364700 LRRC56Q8IYG6 542 aaPredicted RBP3.89□□□□□ -1.79
RNU4-56P-201ENST00000364700 TOP6BLQ8N6T0 577 aa3.89□□□□□ -1.79
RNU4-56P-201ENST00000364700 RNF214Q8ND24 703 aa3.89□□□□□ -1.79
RNU4-56P-201ENST00000364700 ISL2Q96A47 359 aa3.89□□□□□ -1.79
RNU4-56P-201ENST00000364700 ARMC5Q96C12 935 aa3.89□□□□□ -1.79
RNU4-56P-201ENST00000364700 HEXIM2Q96MH2 286 aaKnown RBP3.89□□□□□ -1.79
RNU4-56P-201ENST00000364700 EMILIN2Q9BXX0 1053 aa3.89□□□□□ -1.79
RNU4-56P-201ENST00000364700 KRTAP4-5Q9BYR2 181 aa3.89□□□□□ -1.79
RNU4-56P-201ENST00000364700 ZC3H12CQ9C0D7 883 aaKnown RBP3.89□□□□□ -1.79
RNU4-56P-201ENST00000364700 SSU72Q9NP77 194 aaKnown RBP3.89□□□□□ -1.79
RNU4-56P-201ENST00000364700 GINM1Q9NU53 330 aa3.89□□□□□ -1.79
RNU4-56P-201ENST00000364700 LMCD1Q9NZU5 365 aa3.89□□□□□ -1.79
RNU4-56P-201ENST00000364700 INPP5FQ9Y2H2 1132 aa3.89□□□□□ -1.79
RNU4-56P-201ENST00000364700 IQCJ-SCHIP1C9J366 451 aaPredicted RBP3.88□□□□□ -1.79
RNU4-56P-201ENST00000364700 GLI1P08151 1106 aa3.88□□□□□ -1.79
RNU4-56P-201ENST00000364700 RPL6Q02878 288 aaKnown RBP3.88□□□□□ -1.79
RNU4-56P-201ENST00000364700 COL9A2Q14055 689 aaPredicted RBP3.88□□□□□ -1.79
RNU4-56P-201ENST00000364700 LRRC14Q15048 493 aa3.88□□□□□ -1.79
RNU4-56P-201ENST00000364700 LCE5AQ5TCM9 118 aa3.88□□□□□ -1.79
RNU4-56P-201ENST00000364700 LCNL1Q6ZST4 164 aa3.88□□□□□ -1.79
RNU4-56P-201ENST00000364700 REXO1Q8N1G1 1221 aaKnown RBP3.88□□□□□ -1.79
RNU4-56P-201ENST00000364700 LIN37Q96GY3 246 aaPredicted RBP3.88□□□□□ -1.79
RNU4-56P-201ENST00000364700 SHDQ96IW2 340 aa3.88□□□□□ -1.79
RNU4-56P-201ENST00000364700 EHMT1Q9H9B1 1298 aa3.88□□□□□ -1.79
RNU4-56P-201ENST00000364700 PRDM7Q9NQW5 492 aa3.88□□□□□ -1.79
RNU4-56P-201ENST00000364700 DNAJA2O60884 412 aa3.87□□□□□ -1.79
RNU4-56P-201ENST00000364700 ZNF865P0CJ78 1059 aaPredicted RBP3.87□□□□□ -1.79
RNU4-56P-201ENST00000364700 ARID5AQ03989 594 aa3.87□□□□□ -1.79
RNU4-56P-201ENST00000364700 NKPD1Q17RQ9 610 aa3.87□□□□□ -1.79
RNU4-56P-201ENST00000364700 MAP1SQ66K74 1059 aaPredicted RBP3.87□□□□□ -1.79
RNU4-56P-201ENST00000364700 LRFN4Q6PJG9 635 aa3.87□□□□□ -1.79
RNU4-56P-201ENST00000364700 RBBP8NLQ8NC74 664 aaPredicted RBP3.87□□□□□ -1.79
RNU4-56P-201ENST00000364700 SPATA32Q96LK8 384 aa3.87□□□□□ -1.79
RNU4-56P-201ENST00000364700 DRC1Q96MC2 740 aa3.87□□□□□ -1.79
RNU4-56P-201ENST00000364700 MIR1-1HGQ9H1L0 117 aa3.87□□□□□ -1.79
RNU4-56P-201ENST00000364700 PRDM10Q9NQV6 1147 aa3.87□□□□□ -1.79
RNU4-56P-201ENST00000364700 ZNRF3Q9ULT6 936 aa3.87□□□□□ -1.79
RNU4-56P-201ENST00000364700 EFR3BQ9Y2G0 817 aa3.87□□□□□ -1.79
RNU4-56P-201ENST00000364700 SAMM50Q9Y512 469 aa3.87□□□□□ -1.79
RNU4-56P-201ENST00000364700 TACC3Q9Y6A5 838 aa3.87□□□□□ -1.79
RNU4-56P-201ENST00000364700 NCANO14594 1321 aa3.87□□□□□ -1.79
RNU4-56P-201ENST00000364700 PITPNM2Q9BZ72 1349 aa3.87□□□□□ -1.79
RNU4-56P-201ENST00000364700 LOC105371045A0A1W2PR82 267 aa3.86□□□□□ -1.79
RNU4-56P-201ENST00000364700 MEIS3P2A8K0S8 358 aa3.86□□□□□ -1.79
RNU4-56P-201ENST00000364700 GNAT3A8MTJ3 354 aa3.86□□□□□ -1.79
RNU4-56P-201ENST00000364700 PRRG2O14669 202 aa3.86□□□□□ -1.79
RNU4-56P-201ENST00000364700 KLF4O43474 513 aa3.86□□□□□ -1.79
RNU4-56P-201ENST00000364700 ZSCAN22P10073 491 aaPredicted RBP3.86□□□□□ -1.79
RNU4-56P-201ENST00000364700 CLCQ05315 142 aa3.86□□□□□ -1.79
RNU4-56P-201ENST00000364700 SERINC3Q13530 473 aa3.86□□□□□ -1.79
RNU4-56P-201ENST00000364700 SF3A1Q15459 793 aaKnown RBP3.86□□□□□ -1.79
RNU4-56P-201ENST00000364700 TMEM67Q5HYA8 995 aa3.86□□□□□ -1.79
RNU4-56P-201ENST00000364700 SNAP47Q5SQN1 464 aa3.86□□□□□ -1.79
RNU4-56P-201ENST00000364700 FYB2Q5VWT5 728 aa3.86□□□□□ -1.79
RNU4-56P-201ENST00000364700 MPZL3Q6UWV2 235 aa3.86□□□□□ -1.79
RNU4-56P-201ENST00000364700 TTLL10Q6ZVT0 673 aa3.86□□□□□ -1.79
RNU4-56P-201ENST00000364700 SYDE1Q6ZW31 735 aaPredicted RBP3.86□□□□□ -1.79
RNU4-56P-201ENST00000364700 AMIGO3Q86WK7 504 aa3.86□□□□□ -1.79
RNU4-56P-201ENST00000364700 FAM169BQ8N8A8 192 aa3.86□□□□□ -1.79
RNU4-56P-201ENST00000364700 UBXN4Q92575 508 aa3.86□□□□□ -1.79
RNU4-56P-201ENST00000364700 KCNB2Q92953 911 aa3.86□□□□□ -1.79
RNU4-56P-201ENST00000364700 PLPPR2Q96GM1 343 aa3.86□□□□□ -1.79
RNU4-56P-201ENST00000364700 TANGO6Q9C0B7 1094 aa3.86□□□□□ -1.79
RNU4-56P-201ENST00000364700 BRMS1Q9HCU9 246 aa3.86□□□□□ -1.79
RNU4-56P-201ENST00000364700 NFIBO00712 420 aa3.85□□□□□ -1.79
RNU4-56P-201ENST00000364700 TLR3O15455 904 aaKnown RBP3.85□□□□□ -1.79
RNU4-56P-201ENST00000364700 KRT1P04264 644 aa3.85□□□□□ -1.79
RNU4-56P-201ENST00000364700 DNAJA1P31689 397 aaKnown RBP3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms