RNA–Protein interactions for RNA: ENST00000234668.6

SYDE2-201, Transcript of synapse defective Rho GTPase homolog 2, humanhuman

TSL 1 (best)

Gene SYDE2, Length 3,000 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE2-201ENST00000234668 TROAPQ12815 778 aa10.45□□□□□ -0.74
SYDE2-201ENST00000234668 PTGDRQ13258 359 aa10.45□□□□□ -0.74
SYDE2-201ENST00000234668 GRIK5Q16478 980 aa10.45□□□□□ -0.74
SYDE2-201ENST00000234668 TOGARAM2Q6ZUX3 1019 aa10.45□□□□□ -0.74
SYDE2-201ENST00000234668 IQCA1Q86XH1 822 aa10.45□□□□□ -0.74
SYDE2-201ENST00000234668 ZSWIM4Q9H7M6 989 aa10.45□□□□□ -0.74
SYDE2-201ENST00000234668 SLU7O95391 586 aaKnown RBP10.44□□□□□ -0.74
SYDE2-201ENST00000234668 RPS8P62241 208 aaKnown RBP10.44□□□□□ -0.74
SYDE2-201ENST00000234668 TMTC2Q8N394 836 aa10.44□□□□□ -0.74
SYDE2-201ENST00000234668 SLC44A5Q8NCS7 719 aa10.44□□□□□ -0.74
SYDE2-201ENST00000234668 MCM9Q9NXL9 1143 aa10.44□□□□□ -0.74
SYDE2-201ENST00000234668 STK36Q9NRP7 1315 aa10.44□□□□□ -0.74
SYDE2-201ENST00000234668 MYH14Q7Z406 1995 aaKnown RBP10.44□□□□□ -0.74
SYDE2-201ENST00000234668 KRT2P35908 639 aa10.44□□□□□ -0.74
SYDE2-201ENST00000234668 NLRP5P59047 1200 aa10.44□□□□□ -0.74
SYDE2-201ENST00000234668 FUT2Q10981 343 aa10.44□□□□□ -0.74
SYDE2-201ENST00000234668 DIXDC1Q155Q3 683 aa10.44□□□□□ -0.74
SYDE2-201ENST00000234668 NSUN4Q96CB9 384 aaKnown RBP10.44□□□□□ -0.74
SYDE2-201ENST00000234668 TSPY2A6NKD2 308 aa10.44□□□□□ -0.74
SYDE2-201ENST00000234668 CCT6AP40227 531 aaKnown RBP10.44□□□□□ -0.74
SYDE2-201ENST00000234668 DPYDQ12882 1025 aa10.44□□□□□ -0.74
SYDE2-201ENST00000234668 NBPF5PQ86XG9 351 aaPredicted RBP10.44□□□□□ -0.74
SYDE2-201ENST00000234668 STAG2Q8N3U4 1231 aa10.44□□□□□ -0.74
SYDE2-201ENST00000234668 WDR24Q96S15 920 aa10.44□□□□□ -0.74
SYDE2-201ENST00000234668 DCP1AQ9NPI6 582 aaPredicted RBP10.44□□□□□ -0.74
SYDE2-201ENST00000234668 BSDC1Q9NW68 430 aaPredicted RBP10.44□□□□□ -0.74
SYDE2-201ENST00000234668 MYH2Q9UKX2 1941 aa10.43□□□□□ -0.74
SYDE2-201ENST00000234668 FAM237AA0A1B0GTK4 181 aa10.43□□□□□ -0.74
SYDE2-201ENST00000234668 USP17L3A6NCW0 530 aa10.43□□□□□ -0.74
SYDE2-201ENST00000234668 USP17L4A6NCW7 530 aa10.43□□□□□ -0.74
SYDE2-201ENST00000234668 MORC3Q14149 939 aa10.43□□□□□ -0.74
SYDE2-201ENST00000234668 USP17L1Q7RTZ2 530 aa10.43□□□□□ -0.74
SYDE2-201ENST00000234668 REXO1L1PQ8IX06 675 aa10.43□□□□□ -0.74
SYDE2-201ENST00000234668 PAGE5Q96GU1 130 aa10.43□□□□□ -0.74
SYDE2-201ENST00000234668 AK7Q96M32 723 aa10.43□□□□□ -0.74
SYDE2-201ENST00000234668 SAP30BPQ9UHR5 308 aaKnown RBP10.43□□□□□ -0.74
SYDE2-201ENST00000234668 ZNF652Q9Y2D9 606 aa10.43□□□□□ -0.74
SYDE2-201ENST00000234668 GNPATO15228 680 aa10.43□□□□□ -0.74
SYDE2-201ENST00000234668 CBFA2T2O43439 604 aa10.43□□□□□ -0.74
SYDE2-201ENST00000234668 NRDCO43847 1150 aa10.43□□□□□ -0.74
SYDE2-201ENST00000234668 GOLGA8HP0CJ92 632 aa10.43□□□□□ -0.74
SYDE2-201ENST00000234668 HIBADHP31937 336 aaKnown RBP10.43□□□□□ -0.74
SYDE2-201ENST00000234668 GNG11P61952 73 aa10.43□□□□□ -0.74
SYDE2-201ENST00000234668 UBE4AQ14139 1066 aa10.43□□□□□ -0.74
SYDE2-201ENST00000234668 TRIM65Q6PJ69 517 aa10.43□□□□□ -0.74
SYDE2-201ENST00000234668 BAG1Q99933 345 aaPredicted RBP10.43□□□□□ -0.74
SYDE2-201ENST00000234668 PHF20Q9BVI0 1012 aa10.43□□□□□ -0.74
SYDE2-201ENST00000234668 CARD6Q9BX69 1037 aa10.43□□□□□ -0.74
SYDE2-201ENST00000234668 RNF26Q9BY78 433 aaPredicted RBP10.43□□□□□ -0.74
SYDE2-201ENST00000234668 MYH3P11055 1940 aa10.42□□□□□ -0.74
SYDE2-201ENST00000234668 BAZ2AQ9UIF9 1905 aaKnown RBP10.42□□□□□ -0.74
SYDE2-201ENST00000234668 SOWAHDA6NJG2 315 aa10.42□□□□□ -0.74
SYDE2-201ENST00000234668 PP2D1A8MPX8 630 aa10.42□□□□□ -0.74
SYDE2-201ENST00000234668 TFRCP02786 760 aaKnown RBP10.42□□□□□ -0.74
SYDE2-201ENST00000234668 SARSP49591 514 aaKnown RBP10.42□□□□□ -0.74
SYDE2-201ENST00000234668 ETF1P62495 437 aaKnown RBP10.42□□□□□ -0.74
SYDE2-201ENST00000234668 NPY5RQ15761 445 aa10.42□□□□□ -0.74
SYDE2-201ENST00000234668 IL17AQ16552 155 aa10.42□□□□□ -0.74
SYDE2-201ENST00000234668 TTC38Q5R3I4 469 aa10.42□□□□□ -0.74
SYDE2-201ENST00000234668 PKNOX2Q96KN3 472 aa10.42□□□□□ -0.74
SYDE2-201ENST00000234668 C8orf37Q96NL8 207 aa10.42□□□□□ -0.74
SYDE2-201ENST00000234668 SETDB2Q96T68 719 aa10.42□□□□□ -0.74
SYDE2-201ENST00000234668 LZTFL1Q9NQ48 299 aa10.42□□□□□ -0.74
SYDE2-201ENST00000234668 HOOK1Q9UJC3 728 aaKnown RBP10.42□□□□□ -0.74
SYDE2-201ENST00000234668 STRCQ7RTU9 1775 aa10.42□□□□□ -0.74
SYDE2-201ENST00000234668 ZNF804BA4D1E1 1349 aa10.42□□□□□ -0.74
SYDE2-201ENST00000234668 XBP1P17861 261 aa10.42□□□□□ -0.74
SYDE2-201ENST00000234668 TFAP4Q01664 338 aa10.42□□□□□ -0.74
SYDE2-201ENST00000234668 ARHGAP29Q52LW3 1261 aa10.42□□□□□ -0.74
SYDE2-201ENST00000234668 TC2NQ8N9U0 490 aa10.42□□□□□ -0.74
SYDE2-201ENST00000234668 CTCFLQ8NI51 663 aaPredicted RBP10.42□□□□□ -0.74
SYDE2-201ENST00000234668 NLRP3Q96P20 1036 aa10.42□□□□□ -0.74
SYDE2-201ENST00000234668 ANKIB1Q9P2G1 1089 aa10.42□□□□□ -0.74
SYDE2-201ENST00000234668 PPP2R2CQ9Y2T4 447 aa10.42□□□□□ -0.74
SYDE2-201ENST00000234668 PSDA5PKW4 1024 aaPredicted RBP10.42□□□□□ -0.74
SYDE2-201ENST00000234668 CUL4BQ13620 913 aa10.42□□□□□ -0.74
SYDE2-201ENST00000234668 TMEM139Q8IV31 216 aa10.42□□□□□ -0.74
SYDE2-201ENST00000234668 ERO1AQ96HE7 468 aa10.42□□□□□ -0.74
SYDE2-201ENST00000234668 VPS16Q9H269 839 aa10.42□□□□□ -0.74
SYDE2-201ENST00000234668 PRDM4Q9UKN5 801 aa10.42□□□□□ -0.74
SYDE2-201ENST00000234668 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.42□□□□□ -0.741e-6■■■■□ 26.5
SYDE2-201ENST00000234668 PRPF3O43395 683 aaKnown RBP10.41□□□□□ -0.74
SYDE2-201ENST00000234668 ABL1P00519 1130 aa10.41□□□□□ -0.74
SYDE2-201ENST00000234668 RBL2Q08999 1139 aa10.41□□□□□ -0.74
SYDE2-201ENST00000234668 SPECC1LQ69YQ0 1117 aa10.41□□□□□ -0.74
SYDE2-201ENST00000234668 TMTC3Q6ZXV5 915 aa10.41□□□□□ -0.74
SYDE2-201ENST00000234668 FBXO33Q7Z6M2 555 aa10.41□□□□□ -0.74
SYDE2-201ENST00000234668 MLKLQ8NB16 471 aa10.41□□□□□ -0.74
SYDE2-201ENST00000234668 VAT1LQ9HCJ6 419 aa10.41□□□□□ -0.74
SYDE2-201ENST00000234668 ZNF446Q9NWS9 450 aa10.41□□□□□ -0.74
SYDE2-201ENST00000234668 CGNQ9P2M7 1197 aaKnown RBP10.41□□□□□ -0.74
SYDE2-201ENST00000234668 CTNND2Q9UQB3 1225 aa10.41□□□□□ -0.74
SYDE2-201ENST00000234668 PES1O00541 588 aaKnown RBP10.41□□□□□ -0.74
SYDE2-201ENST00000234668 ZNF18P17022 549 aa10.41□□□□□ -0.74
SYDE2-201ENST00000234668 NFIXQ14938 502 aa10.41□□□□□ -0.74
SYDE2-201ENST00000234668 SF3B3Q15393 1217 aaKnown RBP10.41□□□□□ -0.74
SYDE2-201ENST00000234668 TYW1BQ6NUM6 668 aa10.41□□□□□ -0.74
SYDE2-201ENST00000234668 DZIP1Q86YF9 867 aaKnown RBP10.41□□□□□ -0.74
SYDE2-201ENST00000234668 GPIHBP1Q8IV16 184 aa10.41□□□□□ -0.74
SYDE2-201ENST00000234668 SMAP1Q8IYB5 467 aaPredicted RBP10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms