RNA–Protein interactions for RNA: ENSMUST00000211046.1

Rfx1-204, Transcript of MHC class II regulatory factor RFX1, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Rfx1, Length 3,677 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1-204ENSMUST00000211046 Gm10142J3KMP7 120 aa4.22□□□□□ -1.73
Rfx1-204ENSMUST00000211046 Krtap4-9B1AQA9 244 aa4.21□□□□□ -1.74
Rfx1-204ENSMUST00000211046 Mt4P47945 62 aa4.18□□□□□ -1.74
Rfx1-204ENSMUST00000211046 Lce1fB9EJP6 147 aa4.16□□□□□ -1.74
Rfx1-204ENSMUST00000211046 Lce1a1Q9CQH5 143 aa4.16□□□□□ -1.74
Rfx1-204ENSMUST00000211046 Fsip2A2ARZ3 6995 aa4.16□□□□□ -1.74
Rfx1-204ENSMUST00000211046 Sprr2iO70560 76 aa4.16□□□□□ -1.74
Rfx1-204ENSMUST00000211046 Krtap19-4Q925H7 84 aa4.12□□□□□ -1.75
Rfx1-204ENSMUST00000211046 Krtap4-16Q91W93 202 aa4.11□□□□□ -1.75
Rfx1-204ENSMUST00000211046 Lce3cQ91V05 98 aa4.09□□□□□ -1.75
Rfx1-204ENSMUST00000211046 Muc16A0A140LJ72 8478 aa4.08□□□□□ -1.76
Rfx1-204ENSMUST00000211046 Sprr2kO70562 68 aa4.08□□□□□ -1.76
Rfx1-204ENSMUST00000211046 Lce3dE9Q8V1 98 aa4.07□□□□□ -1.76
Rfx1-204ENSMUST00000211046 Krtap4-13Q9D7P3 165 aa4.06□□□□□ -1.76
Rfx1-204ENSMUST00000211046 Gm38119A0A0A6YX29 146 aa4.01□□□□□ -1.77
Rfx1-204ENSMUST00000211046 Sprr2fO70557 76 aa4.01□□□□□ -1.77
Rfx1-204ENSMUST00000211046 2300003K06RikA2A4M0 262 aa3.97□□□□□ -1.77
Rfx1-204ENSMUST00000211046 Lce3eF8VQJ0 98 aa3.97□□□□□ -1.77
Rfx1-204ENSMUST00000211046 Lce3fQ6PAI4 98 aa3.97□□□□□ -1.77
Rfx1-204ENSMUST00000211046 Gm10024A0A0A0MQA4 119 aa3.95□□□□□ -1.78
Rfx1-204ENSMUST00000211046 Sprr2hO70559 108 aa3.95□□□□□ -1.78
Rfx1-204ENSMUST00000211046 Krtap6-3A0A087WQL6 57 aa3.93□□□□□ -1.78
Rfx1-204ENSMUST00000211046 Lce1bQ9D149 137 aa3.92□□□□□ -1.78
Rfx1-204ENSMUST00000211046 Lce3aQ497I5 98 aa3.92□□□□□ -1.78
Rfx1-204ENSMUST00000211046 Lce1lQ9D1G7 135 aa3.92□□□□□ -1.78
Rfx1-204ENSMUST00000211046 Sprr2eO70556 76 aa3.9□□□□□ -1.79
Rfx1-204ENSMUST00000211046 ObscnA2AAJ9 8891 aaKnown RBP3.9□□□□□ -1.79
Rfx1-204ENSMUST00000211046 Krtap4-7Q9D732 168 aa3.86□□□□□ -1.79
Rfx1-204ENSMUST00000211046 Krtap20-2E9Q0A8 60 aa3.57□□□□□ -1.84
Rfx1-204ENSMUST00000211046 Lce1kJ3QP15 125 aa3.5□□□□□ -1.85
Rfx1-204ENSMUST00000211046 A0A1Y7VJH8 109 aa3.43□□□□□ -1.86
Rfx1-204ENSMUST00000211046 Mt1P02802 61 aaKnown RBP3.39□□□□□ -1.87
Rfx1-204ENSMUST00000211046 Macf1Q9QXZ0 7354 aaKnown RBP3.37□□□□□ -1.87
Rfx1-204ENSMUST00000211046 Krtap5-2Q9D5Z7 189 aa3.37□□□□□ -1.87
Rfx1-204ENSMUST00000211046 Gm11554B1AQB2 190 aa3.37□□□□□ -1.87
Rfx1-204ENSMUST00000211046 Gm11559Q9D3H7 191 aa3.32□□□□□ -1.88
Rfx1-204ENSMUST00000211046 Gm11568A2A4M2 211 aa3.31□□□□□ -1.88
Rfx1-204ENSMUST00000211046 Krtap9-1Q64526 186 aa3.31□□□□□ -1.88
Rfx1-204ENSMUST00000211046 Eppk1Q8R0W0 6548 aa3.21□□□□□ -1.9
Rfx1-204ENSMUST00000211046 Gm4553A0A1B0GSA9 284 aa3.2□□□□□ -1.9
Rfx1-204ENSMUST00000211046 A030005L19RikA0A1Y7VIU2 113 aa3.18□□□□□ -1.9
Rfx1-204ENSMUST00000211046 Kmt2dQ6PDK2 5588 aa3.15□□□□□ -1.91
Rfx1-204ENSMUST00000211046 Gm2431E9Q8S1 172 aa3.12□□□□□ -1.91
Rfx1-204ENSMUST00000211046 DstQ91ZU6 7393 aaKnown RBP3.11□□□□□ -1.91
Rfx1-204ENSMUST00000211046 Gm11639A0A1D5RLM8 5808 aa3.06□□□□□ -1.92
Rfx1-204ENSMUST00000211046 Gm45337A0A1B0GS71 263 aa3.05□□□□□ -1.92
Rfx1-204ENSMUST00000211046 Hmcn1D3YXG0 5634 aa3.03□□□□□ -1.92
Rfx1-204ENSMUST00000211046 Muc19Q6PZE0 7524 aa3.03□□□□□ -1.92
Rfx1-204ENSMUST00000211046 Gm10153A0A1B0GRL1 320 aa3.02□□□□□ -1.93
Rfx1-204ENSMUST00000211046 Mt3P28184 68 aa2.97□□□□□ -1.93
Rfx1-204ENSMUST00000211046 Gm40460A0A1B0GR10 244 aa2.94□□□□□ -1.94
Rfx1-204ENSMUST00000211046 Gm7579A0A1B0GRJ4 243 aa2.94□□□□□ -1.94
Rfx1-204ENSMUST00000211046 Krtap5-5Q2TA51 241 aa2.94□□□□□ -1.94
Rfx1-204ENSMUST00000211046 Krtap5-4Q62220 223 aa2.94□□□□□ -1.94
Rfx1-204ENSMUST00000211046 Gpr98Q8VHN7 6298 aaKnown RBP2.89□□□□□ -1.95
Rfx1-204ENSMUST00000211046 Gm39115A0A1B0GSH7 232 aa2.88□□□□□ -1.95
Rfx1-204ENSMUST00000211046 NebE9Q1W3 7152 aa2.88□□□□□ -1.95
Rfx1-204ENSMUST00000211046 A0A1Y7VLE6 161 aa2.85□□□□□ -1.95
Rfx1-204ENSMUST00000211046 1110025L11RikO09048 78 aa2.68□□□□□ -1.98
Rfx1-204ENSMUST00000211046 Krtap6-5Q925H3 78 aa2.68□□□□□ -1.98
Rfx1-204ENSMUST00000211046 Gm45618A0A1B0GSA0 219 aa2.65□□□□□ -1.99
Rfx1-204ENSMUST00000211046 AhnakE9Q616 5656 aaKnown RBP2.64□□□□□ -1.99
Rfx1-204ENSMUST00000211046 Sprr2bO70554 98 aa2.57□□□□□ -2
Rfx1-204ENSMUST00000211046 Phgr1Q8K0G7 91 aa2.39□□□□□ -2.03
Rfx1-204ENSMUST00000211046 Gm10229O08631 77 aa2.37□□□□□ -2.03
Rfx1-204ENSMUST00000211046 A0A1Y7VJ07 166 aa2.3□□□□□ -2.04
Rfx1-204ENSMUST00000211046 Gm11567Q9D141 195 aa2.29□□□□□ -2.04
Rfx1-204ENSMUST00000211046 Krtap21-1Q925H4 128 aa2.2□□□□□ -2.06
Rfx1-204ENSMUST00000211046 Gm29735A0A1B0GT06 219 aa2.16□□□□□ -2.06
Rfx1-204ENSMUST00000211046 A0A286YCP9 139 aa2.14□□□□□ -2.07
Rfx1-204ENSMUST00000211046 Krtap6-2O08884 159 aa1.94□□□□□ -2.1
Rfx1-204ENSMUST00000211046 A030003K21RikA0A1Y7VIM3 128 aa1.69□□□□□ -2.14
Rfx1-204ENSMUST00000211046 Krtap5-1Q64507 230 aa1.67□□□□□ -2.14
Rfx1-204ENSMUST00000211046 Krtap28-10A0A1Y7VP58 119 aa1.36□□□□□ -2.19
Rfx1-204ENSMUST00000211046 Gm4559A4IF42 199 aa1.26□□□□□ -2.21
Rfx1-204ENSMUST00000211046 Gm6217A0A1Y7VJK9 128 aa1.25□□□□□ -2.21
Rfx1-204ENSMUST00000211046 Krtap28-13A0A087WQP5 138 aa1.23□□□□□ -2.21
Rfx1-204ENSMUST00000211046 A030005K14RikA0A1Y7VNY1 122 aa1.17□□□□□ -2.22
Rfx1-204ENSMUST00000211046 A030014E15RikA0A1Y7VJV2 120 aa1.13□□□□□ -2.23
Rfx1-204ENSMUST00000211046 Gm7544A0A1Y7VJ58 118 aa0.98□□□□□ -2.25
Retrieved 80 of 22,080 RNA–protein pairs in 48.2 ms