RNA–Protein interactions for RNA: ENSMUST00000210774.1

Ebf3-208, Transcript of Transcription factor COE3, mousemouse

TSL 1 (best) BASIC

Gene Ebf3, Length 2,994 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-208ENSMUST00000210774 Krtap4-2B1AQ85 167 aa4.7□□□□□ -1.66
Ebf3-208ENSMUST00000210774 Lce3dE9Q8V1 98 aa4.7□□□□□ -1.66
Ebf3-208ENSMUST00000210774 Syne2Q6ZWQ0 6874 aaKnown RBP4.69□□□□□ -1.66
Ebf3-208ENSMUST00000210774 Krtap4-16Q91W93 202 aa4.64□□□□□ -1.67
Ebf3-208ENSMUST00000210774 Gm11596B1AQB0 205 aa4.6□□□□□ -1.67
Ebf3-208ENSMUST00000210774 Sprr2fO70557 76 aa4.59□□□□□ -1.67
Ebf3-208ENSMUST00000210774 Lce3eF8VQJ0 98 aa4.56□□□□□ -1.68
Ebf3-208ENSMUST00000210774 Lce3fQ6PAI4 98 aa4.56□□□□□ -1.68
Ebf3-208ENSMUST00000210774 Krtap19-4Q925H7 84 aa4.56□□□□□ -1.68
Ebf3-208ENSMUST00000210774 Gm38119A0A0A6YX29 146 aa4.56□□□□□ -1.68
Ebf3-208ENSMUST00000210774 Sprr2hO70559 108 aa4.54□□□□□ -1.68
Ebf3-208ENSMUST00000210774 Mt4P47945 62 aa4.53□□□□□ -1.68
Ebf3-208ENSMUST00000210774 Krtap31-2Q8CAY5 177 aa4.53□□□□□ -1.68
Ebf3-208ENSMUST00000210774 Lce3aQ497I5 98 aa4.5□□□□□ -1.69
Ebf3-208ENSMUST00000210774 Lce1bQ9D149 137 aa4.47□□□□□ -1.69
Ebf3-208ENSMUST00000210774 A0A1Y7VJH8 109 aa4.47□□□□□ -1.69
Ebf3-208ENSMUST00000210774 Sprr2eO70556 76 aa4.47□□□□□ -1.69
Ebf3-208ENSMUST00000210774 Muc16A0A140LJ72 8478 aa4.44□□□□□ -1.7
Ebf3-208ENSMUST00000210774 Gm11564A2A4L9 201 aa4.44□□□□□ -1.7
Ebf3-208ENSMUST00000210774 Gm11595B1AQA7 289 aa4.44□□□□□ -1.7
Ebf3-208ENSMUST00000210774 Krtap4-8B1AQA8 209 aa4.44□□□□□ -1.7
Ebf3-208ENSMUST00000210774 Krtap4-9B1AQA9 244 aa4.41□□□□□ -1.7
Ebf3-208ENSMUST00000210774 2300003K06RikA2A4M0 262 aa4.39□□□□□ -1.71
Ebf3-208ENSMUST00000210774 ObscnA2AAJ9 8891 aaKnown RBP4.39□□□□□ -1.71
Ebf3-208ENSMUST00000210774 Krtap4-13Q9D7P3 165 aa4.31□□□□□ -1.72
Ebf3-208ENSMUST00000210774 Macf1Q9QXZ0 7354 aaKnown RBP4.3□□□□□ -1.72
Ebf3-208ENSMUST00000210774 Sprr2kO70562 68 aa4.26□□□□□ -1.73
Ebf3-208ENSMUST00000210774 Krtap28-10A0A1Y7VP58 119 aa4.23□□□□□ -1.73
Ebf3-208ENSMUST00000210774 A0A1Y7VLE6 161 aa4.19□□□□□ -1.74
Ebf3-208ENSMUST00000210774 Krtap6-3A0A087WQL6 57 aa4.16□□□□□ -1.74
Ebf3-208ENSMUST00000210774 Krtap28-13A0A087WQP5 138 aa4.14□□□□□ -1.75
Ebf3-208ENSMUST00000210774 Lce1kJ3QP15 125 aa4.08□□□□□ -1.76
Ebf3-208ENSMUST00000210774 Gm7544A0A1Y7VJ58 118 aa4.07□□□□□ -1.76
Ebf3-208ENSMUST00000210774 A030005K14RikA0A1Y7VNY1 122 aa4.07□□□□□ -1.76
Ebf3-208ENSMUST00000210774 Lce1lQ9D1G7 135 aa4.03□□□□□ -1.76
Ebf3-208ENSMUST00000210774 Krtap5-2Q9D5Z7 189 aa4.03□□□□□ -1.76
Ebf3-208ENSMUST00000210774 A030005L19RikA0A1Y7VIU2 113 aa4.01□□□□□ -1.77
Ebf3-208ENSMUST00000210774 Gm10024A0A0A0MQA4 119 aa3.96□□□□□ -1.78
Ebf3-208ENSMUST00000210774 Krtap20-2E9Q0A8 60 aa3.9□□□□□ -1.79
Ebf3-208ENSMUST00000210774 Kmt2dQ6PDK2 5588 aa3.85□□□□□ -1.79
Ebf3-208ENSMUST00000210774 Mt1P02802 61 aaKnown RBP3.83□□□□□ -1.8
Ebf3-208ENSMUST00000210774 Muc19Q6PZE0 7524 aa3.81□□□□□ -1.8
Ebf3-208ENSMUST00000210774 Gm11568A2A4M2 211 aa3.8□□□□□ -1.8
Ebf3-208ENSMUST00000210774 Krtap9-1Q64526 186 aa3.8□□□□□ -1.8
Ebf3-208ENSMUST00000210774 Gm4553A0A1B0GSA9 284 aa3.77□□□□□ -1.81
Ebf3-208ENSMUST00000210774 Gm45337A0A1B0GS71 263 aa3.75□□□□□ -1.81
Ebf3-208ENSMUST00000210774 Gm10153A0A1B0GRL1 320 aa3.74□□□□□ -1.81
Ebf3-208ENSMUST00000210774 A0A1Y7VJ07 166 aa3.69□□□□□ -1.82
Ebf3-208ENSMUST00000210774 Hmcn1D3YXG0 5634 aa3.69□□□□□ -1.82
Ebf3-208ENSMUST00000210774 Gm40460A0A1B0GR10 244 aa3.66□□□□□ -1.82
Ebf3-208ENSMUST00000210774 Gm7579A0A1B0GRJ4 243 aa3.66□□□□□ -1.82
Ebf3-208ENSMUST00000210774 Krtap5-5Q2TA51 241 aa3.66□□□□□ -1.82
Ebf3-208ENSMUST00000210774 Krtap5-4Q62220 223 aa3.66□□□□□ -1.82
Ebf3-208ENSMUST00000210774 Gm11559Q9D3H7 191 aa3.66□□□□□ -1.82
Ebf3-208ENSMUST00000210774 A0A286YCP9 139 aa3.63□□□□□ -1.83
Ebf3-208ENSMUST00000210774 A030014E15RikA0A1Y7VJV2 120 aa3.61□□□□□ -1.83
Ebf3-208ENSMUST00000210774 Gm11554B1AQB2 190 aa3.58□□□□□ -1.84
Ebf3-208ENSMUST00000210774 DstQ91ZU6 7393 aaKnown RBP3.56□□□□□ -1.84
Ebf3-208ENSMUST00000210774 Gm2431E9Q8S1 172 aa3.55□□□□□ -1.84
Ebf3-208ENSMUST00000210774 A030003K21RikA0A1Y7VIM3 128 aa3.54□□□□□ -1.84
Ebf3-208ENSMUST00000210774 Gm6217A0A1Y7VJK9 128 aa3.49□□□□□ -1.85
Ebf3-208ENSMUST00000210774 Gm39115A0A1B0GSH7 232 aa3.46□□□□□ -1.86
Ebf3-208ENSMUST00000210774 Mt3P28184 68 aa3.45□□□□□ -1.86
Ebf3-208ENSMUST00000210774 NebE9Q1W3 7152 aa3.37□□□□□ -1.87
Ebf3-208ENSMUST00000210774 Eppk1Q8R0W0 6548 aa3.29□□□□□ -1.88
Ebf3-208ENSMUST00000210774 Gm11639A0A1D5RLM8 5808 aa3.21□□□□□ -1.9
Ebf3-208ENSMUST00000210774 Gm45618A0A1B0GSA0 219 aa3.13□□□□□ -1.91
Ebf3-208ENSMUST00000210774 1110025L11RikO09048 78 aa2.93□□□□□ -1.94
Ebf3-208ENSMUST00000210774 Krtap6-5Q925H3 78 aa2.93□□□□□ -1.94
Ebf3-208ENSMUST00000210774 AhnakE9Q616 5656 aaKnown RBP2.87□□□□□ -1.95
Ebf3-208ENSMUST00000210774 Sprr2bO70554 98 aa2.85□□□□□ -1.95
Ebf3-208ENSMUST00000210774 Phgr1Q8K0G7 91 aa2.78□□□□□ -1.96
Ebf3-208ENSMUST00000210774 Gm29735A0A1B0GT06 219 aa2.77□□□□□ -1.97
Ebf3-208ENSMUST00000210774 Gpr98Q8VHN7 6298 aaKnown RBP2.76□□□□□ -1.97
Ebf3-208ENSMUST00000210774 Gm10229O08631 77 aa2.58□□□□□ -2
Ebf3-208ENSMUST00000210774 Gm11567Q9D141 195 aa2.55□□□□□ -2
Ebf3-208ENSMUST00000210774 Krtap21-1Q925H4 128 aa2.42□□□□□ -2.02
Ebf3-208ENSMUST00000210774 Krtap6-2O08884 159 aa2.19□□□□□ -2.06
Ebf3-208ENSMUST00000210774 Krtap5-1Q64507 230 aa1.76□□□□□ -2.13
Ebf3-208ENSMUST00000210774 Gm4559A4IF42 199 aa1.7□□□□□ -2.14
Retrieved 80 of 22,080 RNA–protein pairs in 135.6 ms