RNA–Protein interactions for RNA: ENSMUST00000170873.9

Vps50-203, Transcript of Syndetin, mousemouse

TSL 1 (best) BASIC

Gene Vps50, Length 3,687 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps50-203ENSMUST00000170873 Gm39115A0A1B0GSH7 232 aa2.27□□□□□ -2.05
Vps50-203ENSMUST00000170873 Gm11938Q9D3H4 131 aa2.27□□□□□ -2.05
Vps50-203ENSMUST00000170873 Krtap22-2J3QNX6 67 aa2.27□□□□□ -2.05
Vps50-203ENSMUST00000170873 Lce1eQ9D139 143 aa2.26□□□□□ -2.05
Vps50-203ENSMUST00000170873 Krtap4-9B1AQA9 244 aa2.25□□□□□ -2.05
Vps50-203ENSMUST00000170873 Gm11569B1AQB1 180 aa2.25□□□□□ -2.05
Vps50-203ENSMUST00000170873 Syne2Q6ZWQ0 6874 aaKnown RBP2.19□□□□□ -2.06
Vps50-203ENSMUST00000170873 4933428G20RikQ9D3X4 101 aa2.18□□□□□ -2.06
Vps50-203ENSMUST00000170873 Gm11554B1AQB2 190 aa2.17□□□□□ -2.06
Vps50-203ENSMUST00000170873 Gm10272F7CZ33 110 aa2.17□□□□□ -2.06
Vps50-203ENSMUST00000170873 Gm11596B1AQB0 205 aa2.16□□□□□ -2.06
Vps50-203ENSMUST00000170873 Krtap19-4Q925H7 84 aa2.15□□□□□ -2.06
Vps50-203ENSMUST00000170873 Gm29735A0A1B0GT06 219 aa2.12□□□□□ -2.07
Vps50-203ENSMUST00000170873 Lce1cQ9D1C5 147 aa2.12□□□□□ -2.07
Vps50-203ENSMUST00000170873 Lce1bQ9D149 137 aa2.08□□□□□ -2.08
Vps50-203ENSMUST00000170873 Gm2431E9Q8S1 172 aa2.06□□□□□ -2.08
Vps50-203ENSMUST00000170873 Krtap4-6Q3V4B7 195 aa2.05□□□□□ -2.08
Vps50-203ENSMUST00000170873 Lce1fB9EJP6 147 aa2.04□□□□□ -2.08
Vps50-203ENSMUST00000170873 Gm11567Q9D141 195 aa2.03□□□□□ -2.09
Vps50-203ENSMUST00000170873 Sprr2iO70560 76 aa2.02□□□□□ -2.09
Vps50-203ENSMUST00000170873 Sprr2hO70559 108 aa2.01□□□□□ -2.09
Vps50-203ENSMUST00000170873 Gm11564A2A4L9 201 aa2□□□□□ -2.09
Vps50-203ENSMUST00000170873 Gm11595B1AQA7 289 aa2□□□□□ -2.09
Vps50-203ENSMUST00000170873 Krtap4-8B1AQA8 209 aa2□□□□□ -2.09
Vps50-203ENSMUST00000170873 Lce3bQ9CQM7 98 aa2□□□□□ -2.09
Vps50-203ENSMUST00000170873 Syne1Q6ZWR6 8799 aa1.99□□□□□ -2.09
Vps50-203ENSMUST00000170873 Sprr2eO70556 76 aa1.99□□□□□ -2.09
Vps50-203ENSMUST00000170873 Gm10100J3QK64 120 aa1.98□□□□□ -2.09
Vps50-203ENSMUST00000170873 Krtap6-3A0A087WQL6 57 aa1.98□□□□□ -2.09
Vps50-203ENSMUST00000170873 Sprr2kO70562 68 aa1.97□□□□□ -2.09
Vps50-203ENSMUST00000170873 2300003K06RikA2A4M0 262 aa1.96□□□□□ -2.1
Vps50-203ENSMUST00000170873 Gm10142J3KMP7 120 aa1.96□□□□□ -2.1
Vps50-203ENSMUST00000170873 Mdn1A2ANY6 5589 aaKnown RBP1.94□□□□□ -2.1
Vps50-203ENSMUST00000170873 Krtap4-13Q9D7P3 165 aa1.92□□□□□ -2.1
Vps50-203ENSMUST00000170873 Mt1P02802 61 aaKnown RBP1.9□□□□□ -2.11
Vps50-203ENSMUST00000170873 Lce3cQ91V05 98 aa1.89□□□□□ -2.11
Vps50-203ENSMUST00000170873 Gm45337A0A1B0GS71 263 aa1.89□□□□□ -2.11
Vps50-203ENSMUST00000170873 Lce3dE9Q8V1 98 aa1.89□□□□□ -2.11
Vps50-203ENSMUST00000170873 Sprr2fO70557 76 aa1.89□□□□□ -2.11
Vps50-203ENSMUST00000170873 Lce3eF8VQJ0 98 aa1.87□□□□□ -2.11
Vps50-203ENSMUST00000170873 Lce3fQ6PAI4 98 aa1.87□□□□□ -2.11
Vps50-203ENSMUST00000170873 Gm11559Q9D3H7 191 aa1.86□□□□□ -2.11
Vps50-203ENSMUST00000170873 ObscnA2AAJ9 8891 aaKnown RBP1.85□□□□□ -2.11
Vps50-203ENSMUST00000170873 Mt4P47945 62 aa1.85□□□□□ -2.11
Vps50-203ENSMUST00000170873 Krtap5-2Q9D5Z7 189 aa1.84□□□□□ -2.11
Vps50-203ENSMUST00000170873 Fsip2A2ARZ3 6995 aa1.83□□□□□ -2.12
Vps50-203ENSMUST00000170873 Krtap20-2E9Q0A8 60 aa1.83□□□□□ -2.12
Vps50-203ENSMUST00000170873 Lce1kJ3QP15 125 aa1.82□□□□□ -2.12
Vps50-203ENSMUST00000170873 Gm11568A2A4M2 211 aa1.82□□□□□ -2.12
Vps50-203ENSMUST00000170873 Lce3aQ497I5 98 aa1.82□□□□□ -2.12
Vps50-203ENSMUST00000170873 Krtap9-1Q64526 186 aa1.82□□□□□ -2.12
Vps50-203ENSMUST00000170873 Gm10153A0A1B0GRL1 320 aa1.8□□□□□ -2.12
Vps50-203ENSMUST00000170873 Krtap5-4Q62220 223 aa1.8□□□□□ -2.12
Vps50-203ENSMUST00000170873 Muc16A0A140LJ72 8478 aa1.78□□□□□ -2.12
Vps50-203ENSMUST00000170873 Eppk1Q8R0W0 6548 aa1.76□□□□□ -2.13
Vps50-203ENSMUST00000170873 Gm10024A0A0A0MQA4 119 aa1.74□□□□□ -2.13
Vps50-203ENSMUST00000170873 Krtap4-16Q91W93 202 aa1.73□□□□□ -2.13
Vps50-203ENSMUST00000170873 Gm4553A0A1B0GSA9 284 aa1.69□□□□□ -2.14
Vps50-203ENSMUST00000170873 Gm40460A0A1B0GR10 244 aa1.68□□□□□ -2.14
Vps50-203ENSMUST00000170873 Gm7579A0A1B0GRJ4 243 aa1.68□□□□□ -2.14
Vps50-203ENSMUST00000170873 Krtap5-5Q2TA51 241 aa1.68□□□□□ -2.14
Vps50-203ENSMUST00000170873 Krtap5-1Q64507 230 aa1.67□□□□□ -2.14
Vps50-203ENSMUST00000170873 Gm11639A0A1D5RLM8 5808 aa1.64□□□□□ -2.15
Vps50-203ENSMUST00000170873 Mt3P28184 68 aa1.63□□□□□ -2.15
Vps50-203ENSMUST00000170873 Gm4559A4IF42 199 aa1.6□□□□□ -2.15
Vps50-203ENSMUST00000170873 Kmt2dQ6PDK2 5588 aa1.57□□□□□ -2.16
Vps50-203ENSMUST00000170873 Hmcn1D3YXG0 5634 aa1.57□□□□□ -2.16
Vps50-203ENSMUST00000170873 Gpr98Q8VHN7 6298 aaKnown RBP1.48□□□□□ -2.17
Vps50-203ENSMUST00000170873 Macf1Q9QXZ0 7354 aaKnown RBP1.48□□□□□ -2.17
Vps50-203ENSMUST00000170873 1110025L11RikO09048 78 aa1.45□□□□□ -2.18
Vps50-203ENSMUST00000170873 Krtap6-5Q925H3 78 aa1.45□□□□□ -2.18
Vps50-203ENSMUST00000170873 Muc19Q6PZE0 7524 aa1.39□□□□□ -2.19
Vps50-203ENSMUST00000170873 Sprr2bO70554 98 aa1.39□□□□□ -2.19
Vps50-203ENSMUST00000170873 AhnakE9Q616 5656 aaKnown RBP1.39□□□□□ -2.19
Vps50-203ENSMUST00000170873 DstQ91ZU6 7393 aaKnown RBP1.31□□□□□ -2.2
Vps50-203ENSMUST00000170873 NebE9Q1W3 7152 aa1.27□□□□□ -2.21
Vps50-203ENSMUST00000170873 Gm10229O08631 77 aa1.27□□□□□ -2.21
Vps50-203ENSMUST00000170873 Krtap21-1Q925H4 128 aa1.22□□□□□ -2.21
Vps50-203ENSMUST00000170873 Phgr1Q8K0G7 91 aa1.18□□□□□ -2.22
Vps50-203ENSMUST00000170873 Krtap6-2O08884 159 aa1.06□□□□□ -2.24
Retrieved 80 of 22,080 RNA–protein pairs in 66.7 ms