RNA–Protein interactions for RNA: ENSMUST00000159337.7

Vcan-205, Transcript of Versican core protein, mousemouse

TSL 1 (best) BASIC

Gene Vcan, Length 2,273 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-205ENSMUST00000159337 Gm10272F7CZ33 110 aa4.97□□□□□ -1.61
Vcan-205ENSMUST00000159337 Gm10061D3Z714 54 aa4.95□□□□□ -1.62
Vcan-205ENSMUST00000159337 Lce1bQ9D149 137 aa4.89□□□□□ -1.63
Vcan-205ENSMUST00000159337 Lce1cQ9D1C5 147 aa4.89□□□□□ -1.63
Vcan-205ENSMUST00000159337 Krtap22-2J3QNX6 67 aa4.87□□□□□ -1.63
Vcan-205ENSMUST00000159337 Krtap19-4Q925H7 84 aa4.77□□□□□ -1.65
Vcan-205ENSMUST00000159337 Lce1lQ9D1G7 135 aa4.77□□□□□ -1.65
Vcan-205ENSMUST00000159337 Gm10100J3QK64 120 aa4.76□□□□□ -1.65
Vcan-205ENSMUST00000159337 Sprr2iO70560 76 aa4.73□□□□□ -1.65
Vcan-205ENSMUST00000159337 Lce1fB9EJP6 147 aa4.72□□□□□ -1.65
Vcan-205ENSMUST00000159337 Lce3bQ9CQM7 98 aa4.7□□□□□ -1.66
Vcan-205ENSMUST00000159337 Gm10142J3KMP7 120 aa4.68□□□□□ -1.66
Vcan-205ENSMUST00000159337 Gm11569B1AQB1 180 aa4.65□□□□□ -1.66
Vcan-205ENSMUST00000159337 Sprr2hO70559 108 aa4.55□□□□□ -1.68
Vcan-205ENSMUST00000159337 Sprr2eO70556 76 aa4.52□□□□□ -1.69
Vcan-205ENSMUST00000159337 Lce3cQ91V05 98 aa4.52□□□□□ -1.69
Vcan-205ENSMUST00000159337 Lce3dE9Q8V1 98 aa4.51□□□□□ -1.69
Vcan-205ENSMUST00000159337 Sprr2fO70557 76 aa4.48□□□□□ -1.69
Vcan-205ENSMUST00000159337 Mdn1A2ANY6 5589 aaKnown RBP4.47□□□□□ -1.69
Vcan-205ENSMUST00000159337 Syne1Q6ZWR6 8799 aa4.45□□□□□ -1.7
Vcan-205ENSMUST00000159337 Syne2Q6ZWQ0 6874 aaKnown RBP4.44□□□□□ -1.7
Vcan-205ENSMUST00000159337 Sprr2kO70562 68 aa4.43□□□□□ -1.7
Vcan-205ENSMUST00000159337 Gm11559Q9D3H7 191 aa4.43□□□□□ -1.7
Vcan-205ENSMUST00000159337 Lce3eF8VQJ0 98 aa4.42□□□□□ -1.7
Vcan-205ENSMUST00000159337 Lce3fQ6PAI4 98 aa4.42□□□□□ -1.7
Vcan-205ENSMUST00000159337 2300003K06RikA2A4M0 262 aa4.41□□□□□ -1.7
Vcan-205ENSMUST00000159337 Gm45618A0A1B0GSA0 219 aa4.39□□□□□ -1.71
Vcan-205ENSMUST00000159337 Gm11596B1AQB0 205 aa4.37□□□□□ -1.71
Vcan-205ENSMUST00000159337 Lce3aQ497I5 98 aa4.34□□□□□ -1.71
Vcan-205ENSMUST00000159337 Krtap4-6Q3V4B7 195 aa4.24□□□□□ -1.73
Vcan-205ENSMUST00000159337 ObscnA2AAJ9 8891 aaKnown RBP4.23□□□□□ -1.73
Vcan-205ENSMUST00000159337 Krtap4-16Q91W93 202 aa4.11□□□□□ -1.75
Vcan-205ENSMUST00000159337 Gm11564A2A4L9 201 aa4.09□□□□□ -1.75
Vcan-205ENSMUST00000159337 Gm11595B1AQA7 289 aa4.09□□□□□ -1.75
Vcan-205ENSMUST00000159337 Krtap4-8B1AQA8 209 aa4.09□□□□□ -1.75
Vcan-205ENSMUST00000159337 Gm39115A0A1B0GSH7 232 aa4.06□□□□□ -1.76
Vcan-205ENSMUST00000159337 Krtap4-9B1AQA9 244 aa4□□□□□ -1.77
Vcan-205ENSMUST00000159337 Mt1P02802 61 aaKnown RBP3.99□□□□□ -1.77
Vcan-205ENSMUST00000159337 Gm11554B1AQB2 190 aa3.93□□□□□ -1.78
Vcan-205ENSMUST00000159337 Krtap6-3A0A087WQL6 57 aa3.9□□□□□ -1.79
Vcan-205ENSMUST00000159337 Mt4P47945 62 aa3.88□□□□□ -1.79
Vcan-205ENSMUST00000159337 Lce1kJ3QP15 125 aa3.87□□□□□ -1.79
Vcan-205ENSMUST00000159337 Gm29735A0A1B0GT06 219 aa3.83□□□□□ -1.8
Vcan-205ENSMUST00000159337 Gm2431E9Q8S1 172 aa3.82□□□□□ -1.8
Vcan-205ENSMUST00000159337 Gm11567Q9D141 195 aa3.81□□□□□ -1.8
Vcan-205ENSMUST00000159337 Krtap4-13Q9D7P3 165 aa3.79□□□□□ -1.8
Vcan-205ENSMUST00000159337 Fsip2A2ARZ3 6995 aa3.78□□□□□ -1.8
Vcan-205ENSMUST00000159337 Gm10024A0A0A0MQA4 119 aa3.75□□□□□ -1.81
Vcan-205ENSMUST00000159337 Gm11568A2A4M2 211 aa3.66□□□□□ -1.82
Vcan-205ENSMUST00000159337 Krtap9-1Q64526 186 aa3.66□□□□□ -1.82
Vcan-205ENSMUST00000159337 Krtap20-2E9Q0A8 60 aa3.58□□□□□ -1.84
Vcan-205ENSMUST00000159337 Gm10153A0A1B0GRL1 320 aa3.5□□□□□ -1.85
Vcan-205ENSMUST00000159337 Krtap5-2Q9D5Z7 189 aa3.48□□□□□ -1.85
Vcan-205ENSMUST00000159337 Mt3P28184 68 aa3.45□□□□□ -1.86
Vcan-205ENSMUST00000159337 Gm45337A0A1B0GS71 263 aa3.39□□□□□ -1.87
Vcan-205ENSMUST00000159337 Muc16A0A140LJ72 8478 aa3.37□□□□□ -1.87
Vcan-205ENSMUST00000159337 Eppk1Q8R0W0 6548 aa3.36□□□□□ -1.87
Vcan-205ENSMUST00000159337 Krtap5-4Q62220 223 aa3.29□□□□□ -1.88
Vcan-205ENSMUST00000159337 Gm4553A0A1B0GSA9 284 aa3.25□□□□□ -1.89
Vcan-205ENSMUST00000159337 Hmcn1D3YXG0 5634 aa3.25□□□□□ -1.89
Vcan-205ENSMUST00000159337 Macf1Q9QXZ0 7354 aaKnown RBP3.18□□□□□ -1.9
Vcan-205ENSMUST00000159337 1110025L11RikO09048 78 aa3.13□□□□□ -1.91
Vcan-205ENSMUST00000159337 Krtap6-5Q925H3 78 aa3.13□□□□□ -1.91
Vcan-205ENSMUST00000159337 Gm11639A0A1D5RLM8 5808 aa3.11□□□□□ -1.91
Vcan-205ENSMUST00000159337 Kmt2dQ6PDK2 5588 aa3.1□□□□□ -1.91
Vcan-205ENSMUST00000159337 Gm40460A0A1B0GR10 244 aa3.09□□□□□ -1.91
Vcan-205ENSMUST00000159337 Gm7579A0A1B0GRJ4 243 aa3.09□□□□□ -1.91
Vcan-205ENSMUST00000159337 Krtap5-5Q2TA51 241 aa3.09□□□□□ -1.91
Vcan-205ENSMUST00000159337 Sprr2bO70554 98 aa3.02□□□□□ -1.93
Vcan-205ENSMUST00000159337 Krtap5-1Q64507 230 aa2.98□□□□□ -1.93
Vcan-205ENSMUST00000159337 Gpr98Q8VHN7 6298 aaKnown RBP2.97□□□□□ -1.93
Vcan-205ENSMUST00000159337 Muc19Q6PZE0 7524 aa2.91□□□□□ -1.94
Vcan-205ENSMUST00000159337 Gm4559A4IF42 199 aa2.91□□□□□ -1.94
Vcan-205ENSMUST00000159337 Gm10229O08631 77 aa2.74□□□□□ -1.97
Vcan-205ENSMUST00000159337 DstQ91ZU6 7393 aaKnown RBP2.71□□□□□ -1.98
Vcan-205ENSMUST00000159337 NebE9Q1W3 7152 aa2.67□□□□□ -1.98
Vcan-205ENSMUST00000159337 Phgr1Q8K0G7 91 aa2.67□□□□□ -1.98
Vcan-205ENSMUST00000159337 AhnakE9Q616 5656 aaKnown RBP2.6□□□□□ -1.99
Vcan-205ENSMUST00000159337 Krtap21-1Q925H4 128 aa2.6□□□□□ -1.99
Vcan-205ENSMUST00000159337 Krtap6-2O08884 159 aa2.26□□□□□ -2.05
Retrieved 80 of 22,080 RNA–protein pairs in 7.7 ms