RNA–Protein interactions for RNA: ENSMUST00000156585.7

Ldb1-207, Transcript of LIM domain-binding protein 1, mousemouse

TSL 1 (best) BASIC

Gene Ldb1, Length 2,014 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1-207ENSMUST00000156585 Syne1Q6ZWR6 8799 aa8.71□□□□□ -1.01
Ldb1-207ENSMUST00000156585 Lce1cQ9D1C5 147 aa8.71□□□□□ -1.02
Ldb1-207ENSMUST00000156585 Fsip2A2ARZ3 6995 aa8.52□□□□□ -1.04
Ldb1-207ENSMUST00000156585 Krtap4-13Q9D7P3 165 aa8.47□□□□□ -1.05
Ldb1-207ENSMUST00000156585 2300003K06RikA2A4M0 262 aa8.46□□□□□ -1.06
Ldb1-207ENSMUST00000156585 Gm10100J3QK64 120 aa8.41□□□□□ -1.06
Ldb1-207ENSMUST00000156585 Sprr2kO70562 68 aa8.39□□□□□ -1.07
Ldb1-207ENSMUST00000156585 Lce1fB9EJP6 147 aa8.35□□□□□ -1.07
Ldb1-207ENSMUST00000156585 Lce1a1Q9CQH5 143 aa8.35□□□□□ -1.07
Ldb1-207ENSMUST00000156585 Lce3cQ91V05 98 aa8.32□□□□□ -1.08
Ldb1-207ENSMUST00000156585 Lce3eF8VQJ0 98 aa8.22□□□□□ -1.09
Ldb1-207ENSMUST00000156585 Lce3fQ6PAI4 98 aa8.22□□□□□ -1.09
Ldb1-207ENSMUST00000156585 Gm10142J3KMP7 120 aa8.22□□□□□ -1.09
Ldb1-207ENSMUST00000156585 Krtap4-7Q9D732 168 aa8.19□□□□□ -1.1
Ldb1-207ENSMUST00000156585 Lce3dE9Q8V1 98 aa8.18□□□□□ -1.1
Ldb1-207ENSMUST00000156585 Sprr2iO70560 76 aa8.13□□□□□ -1.11
Ldb1-207ENSMUST00000156585 Lce1kJ3QP15 125 aa8.12□□□□□ -1.11
Ldb1-207ENSMUST00000156585 Mt1P02802 61 aaKnown RBP8.03□□□□□ -1.12
Ldb1-207ENSMUST00000156585 Lce1lQ9D1G7 135 aa8.03□□□□□ -1.12
Ldb1-207ENSMUST00000156585 ObscnA2AAJ9 8891 aaKnown RBP7.97□□□□□ -1.13
Ldb1-207ENSMUST00000156585 A0A1Y7VJH8 109 aa7.97□□□□□ -1.13
Ldb1-207ENSMUST00000156585 Sprr2hO70559 108 aa7.97□□□□□ -1.13
Ldb1-207ENSMUST00000156585 Krtap6-3A0A087WQL6 57 aa7.89□□□□□ -1.15
Ldb1-207ENSMUST00000156585 Lce3aQ497I5 98 aa7.88□□□□□ -1.15
Ldb1-207ENSMUST00000156585 Gm11568A2A4M2 211 aa7.83□□□□□ -1.16
Ldb1-207ENSMUST00000156585 Krtap9-1Q64526 186 aa7.83□□□□□ -1.16
Ldb1-207ENSMUST00000156585 Krtap20-2E9Q0A8 60 aa7.79□□□□□ -1.16
Ldb1-207ENSMUST00000156585 Krtap5-2Q9D5Z7 189 aa7.79□□□□□ -1.16
Ldb1-207ENSMUST00000156585 Sprr2eO70556 76 aa7.64□□□□□ -1.19
Ldb1-207ENSMUST00000156585 Gm10153A0A1B0GRL1 320 aa7.41□□□□□ -1.22
Ldb1-207ENSMUST00000156585 Sprr2fO70557 76 aa7.27□□□□□ -1.25
Ldb1-207ENSMUST00000156585 Mt3P28184 68 aa7.19□□□□□ -1.26
Ldb1-207ENSMUST00000156585 Gm4553A0A1B0GSA9 284 aa7.18□□□□□ -1.26
Ldb1-207ENSMUST00000156585 Krtap31-1Q9D644 177 aa7.18□□□□□ -1.26
Ldb1-207ENSMUST00000156585 Gm11559Q9D3H7 191 aa7.13□□□□□ -1.27
Ldb1-207ENSMUST00000156585 Gm45337A0A1B0GS71 263 aa7.13□□□□□ -1.27
Ldb1-207ENSMUST00000156585 A0A1Y7VLE6 161 aa7.05□□□□□ -1.28
Ldb1-207ENSMUST00000156585 Macf1Q9QXZ0 7354 aaKnown RBP6.98□□□□□ -1.29
Ldb1-207ENSMUST00000156585 Gm2431E9Q8S1 172 aa6.94□□□□□ -1.3
Ldb1-207ENSMUST00000156585 Gm40460A0A1B0GR10 244 aa6.93□□□□□ -1.3
Ldb1-207ENSMUST00000156585 Gm7579A0A1B0GRJ4 243 aa6.93□□□□□ -1.3
Ldb1-207ENSMUST00000156585 Krtap5-5Q2TA51 241 aa6.93□□□□□ -1.3
Ldb1-207ENSMUST00000156585 Krtap5-4Q62220 223 aa6.93□□□□□ -1.3
Ldb1-207ENSMUST00000156585 Gm10024A0A0A0MQA4 119 aa6.85□□□□□ -1.31
Ldb1-207ENSMUST00000156585 Gm11554B1AQB2 190 aa6.85□□□□□ -1.31
Ldb1-207ENSMUST00000156585 Hmcn1D3YXG0 5634 aa6.83□□□□□ -1.32
Ldb1-207ENSMUST00000156585 Krtap4-16Q91W93 202 aa6.65□□□□□ -1.35
Ldb1-207ENSMUST00000156585 Kmt2dQ6PDK2 5588 aa6.55□□□□□ -1.36
Ldb1-207ENSMUST00000156585 A030005L19RikA0A1Y7VIU2 113 aa6.46□□□□□ -1.38
Ldb1-207ENSMUST00000156585 Gm39115A0A1B0GSH7 232 aa6.42□□□□□ -1.38
Ldb1-207ENSMUST00000156585 1110025L11RikO09048 78 aa6.11□□□□□ -1.43
Ldb1-207ENSMUST00000156585 Krtap6-5Q925H3 78 aa6.11□□□□□ -1.43
Ldb1-207ENSMUST00000156585 DstQ91ZU6 7393 aaKnown RBP6.02□□□□□ -1.45
Ldb1-207ENSMUST00000156585 Muc16A0A140LJ72 8478 aa6□□□□□ -1.45
Ldb1-207ENSMUST00000156585 Eppk1Q8R0W0 6548 aa5.91□□□□□ -1.46
Ldb1-207ENSMUST00000156585 Gm11639A0A1D5RLM8 5808 aa5.86□□□□□ -1.47
Ldb1-207ENSMUST00000156585 Muc19Q6PZE0 7524 aa5.84□□□□□ -1.47
Ldb1-207ENSMUST00000156585 AhnakE9Q616 5656 aaKnown RBP5.71□□□□□ -1.49
Ldb1-207ENSMUST00000156585 A0A1Y7VJ07 166 aa5.65□□□□□ -1.51
Ldb1-207ENSMUST00000156585 Gm45618A0A1B0GSA0 219 aa5.56□□□□□ -1.52
Ldb1-207ENSMUST00000156585 Sprr2bO70554 98 aa5.51□□□□□ -1.53
Ldb1-207ENSMUST00000156585 Gm10229O08631 77 aa5.41□□□□□ -1.54
Ldb1-207ENSMUST00000156585 NebE9Q1W3 7152 aa5.31□□□□□ -1.56
Ldb1-207ENSMUST00000156585 Gm29735A0A1B0GT06 219 aa5.23□□□□□ -1.57
Ldb1-207ENSMUST00000156585 Gm11567Q9D141 195 aa5.2□□□□□ -1.58
Ldb1-207ENSMUST00000156585 Gpr98Q8VHN7 6298 aaKnown RBP5.14□□□□□ -1.59
Ldb1-207ENSMUST00000156585 Krtap21-1Q925H4 128 aa5.01□□□□□ -1.61
Ldb1-207ENSMUST00000156585 A0A286YCP9 139 aa4.72□□□□□ -1.65
Ldb1-207ENSMUST00000156585 Phgr1Q8K0G7 91 aa4.71□□□□□ -1.66
Ldb1-207ENSMUST00000156585 Krtap31-2Q8CAY5 177 aa4.7□□□□□ -1.66
Ldb1-207ENSMUST00000156585 Krtap6-2O08884 159 aa4.59□□□□□ -1.67
Ldb1-207ENSMUST00000156585 A030003K21RikA0A1Y7VIM3 128 aa3.27□□□□□ -1.89
Ldb1-207ENSMUST00000156585 Krtap5-1Q64507 230 aa3.22□□□□□ -1.89
Ldb1-207ENSMUST00000156585 Gm4559A4IF42 199 aa3□□□□□ -1.93
Ldb1-207ENSMUST00000156585 Krtap28-13A0A087WQP5 138 aa2.53□□□□□ -2
Ldb1-207ENSMUST00000156585 Krtap28-10A0A1Y7VP58 119 aa2.49□□□□□ -2.01
Ldb1-207ENSMUST00000156585 Gm6217A0A1Y7VJK9 128 aa2.36□□□□□ -2.03
Ldb1-207ENSMUST00000156585 Gm7544A0A1Y7VJ58 118 aa1.76□□□□□ -2.13
Ldb1-207ENSMUST00000156585 A030005K14RikA0A1Y7VNY1 122 aa1.62□□□□□ -2.15
Ldb1-207ENSMUST00000156585 A030014E15RikA0A1Y7VJV2 120 aa1.52□□□□□ -2.17
Retrieved 80 of 22,080 RNA–protein pairs in 8.6 ms