RNA–Protein interactions for RNA: ENSMUST00000118976.8

Ccdc9-202, Transcript of Coiled-coil domain-containing protein 9, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc9, Length 2,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9-202ENSMUST00000118976 Gm11596B1AQB0 205 aa7,87□□□□□ -1,15
Ccdc9-202ENSMUST00000118976 Sprr2fO70557 76 aa7,83□□□□□ -1,16
Ccdc9-202ENSMUST00000118976 Lce3eF8VQJ0 98 aa7,76□□□□□ -1,17
Ccdc9-202ENSMUST00000118976 Lce3fQ6PAI4 98 aa7,76□□□□□ -1,17
Ccdc9-202ENSMUST00000118976 Sprr2kO70562 68 aa7,74□□□□□ -1,17
Ccdc9-202ENSMUST00000118976 Syne1Q6ZWR6 8799 aa7,72□□□□□ -1,17
Ccdc9-202ENSMUST00000118976 Syne2Q6ZWQ0 6874 aaKnown RBP7,7□□□□□ -1,18
Ccdc9-202ENSMUST00000118976 Gm11564A2A4L9 201 aa7,7□□□□□ -1,18
Ccdc9-202ENSMUST00000118976 Gm11563B1AQ90 168 aa7,7□□□□□ -1,18
Ccdc9-202ENSMUST00000118976 Gm11595B1AQA7 289 aa7,7□□□□□ -1,18
Ccdc9-202ENSMUST00000118976 Krtap4-8B1AQA8 209 aa7,7□□□□□ -1,18
Ccdc9-202ENSMUST00000118976 2300003K06RikA2A4M0 262 aa7,67□□□□□ -1,18
Ccdc9-202ENSMUST00000118976 Lce3aQ497I5 98 aa7,63□□□□□ -1,19
Ccdc9-202ENSMUST00000118976 Krtap31-1Q9D644 177 aa7,58□□□□□ -1,2
Ccdc9-202ENSMUST00000118976 Mt4P47945 62 aa7,53□□□□□ -1,2
Ccdc9-202ENSMUST00000118976 Lce1bQ9D149 137 aa7,51□□□□□ -1,21
Ccdc9-202ENSMUST00000118976 Krtap4-9B1AQA9 244 aa7,5□□□□□ -1,21
Ccdc9-202ENSMUST00000118976 Gm38119A0A0A6YX29 146 aa7,35□□□□□ -1,23
Ccdc9-202ENSMUST00000118976 ObscnA2AAJ9 8891 aaKnown RBP7,34□□□□□ -1,23
Ccdc9-202ENSMUST00000118976 Krtap4-16Q91W93 202 aa7,22□□□□□ -1,25
Ccdc9-202ENSMUST00000118976 Krtap4-13Q9D7P3 165 aa7,21□□□□□ -1,26
Ccdc9-202ENSMUST00000118976 Fsip2A2ARZ3 6995 aa7,18□□□□□ -1,26
Ccdc9-202ENSMUST00000118976 Krtap4-7Q9D732 168 aa6,96□□□□□ -1,3
Ccdc9-202ENSMUST00000118976 Mt1P02802 61 aaKnown RBP6,95□□□□□ -1,3
Ccdc9-202ENSMUST00000118976 Krtap6-3A0A087WQL6 57 aa6,84□□□□□ -1,32
Ccdc9-202ENSMUST00000118976 Lce1kJ3QP15 125 aa6,79□□□□□ -1,32
Ccdc9-202ENSMUST00000118976 Lce1lQ9D1G7 135 aa6,79□□□□□ -1,32
Ccdc9-202ENSMUST00000118976 A0A1Y7VJH8 109 aa6,78□□□□□ -1,32
Ccdc9-202ENSMUST00000118976 Krtap5-2Q9D5Z7 189 aa6,62□□□□□ -1,35
Ccdc9-202ENSMUST00000118976 Krtap20-2E9Q0A8 60 aa6,6□□□□□ -1,35
Ccdc9-202ENSMUST00000118976 Gm11568A2A4M2 211 aa6,58□□□□□ -1,36
Ccdc9-202ENSMUST00000118976 Krtap9-1Q64526 186 aa6,58□□□□□ -1,36
Ccdc9-202ENSMUST00000118976 Gm10024A0A0A0MQA4 119 aa6,58□□□□□ -1,36
Ccdc9-202ENSMUST00000118976 Gm10153A0A1B0GRL1 320 aa6,24□□□□□ -1,41
Ccdc9-202ENSMUST00000118976 A0A1Y7VLE6 161 aa6,15□□□□□ -1,43
Ccdc9-202ENSMUST00000118976 Gm4553A0A1B0GSA9 284 aa6,14□□□□□ -1,43
Ccdc9-202ENSMUST00000118976 Gm11559Q9D3H7 191 aa6,11□□□□□ -1,43
Ccdc9-202ENSMUST00000118976 Gm45337A0A1B0GS71 263 aa6,07□□□□□ -1,44
Ccdc9-202ENSMUST00000118976 Mt3P28184 68 aa6,03□□□□□ -1,44
Ccdc9-202ENSMUST00000118976 Gm2431E9Q8S1 172 aa5,91□□□□□ -1,46
Ccdc9-202ENSMUST00000118976 Krtap31-2Q8CAY5 177 aa5,9□□□□□ -1,46
Ccdc9-202ENSMUST00000118976 Gm40460A0A1B0GR10 244 aa5,9□□□□□ -1,47
Ccdc9-202ENSMUST00000118976 Gm7579A0A1B0GRJ4 243 aa5,9□□□□□ -1,47
Ccdc9-202ENSMUST00000118976 Krtap5-5Q2TA51 241 aa5,9□□□□□ -1,47
Ccdc9-202ENSMUST00000118976 Krtap5-4Q62220 223 aa5,9□□□□□ -1,47
Ccdc9-202ENSMUST00000118976 Muc16A0A140LJ72 8478 aa5,87□□□□□ -1,47
Ccdc9-202ENSMUST00000118976 Gm11554B1AQB2 190 aa5,84□□□□□ -1,47
Ccdc9-202ENSMUST00000118976 Macf1Q9QXZ0 7354 aaKnown RBP5,83□□□□□ -1,48
Ccdc9-202ENSMUST00000118976 Hmcn1D3YXG0 5634 aa5,7□□□□□ -1,5
Ccdc9-202ENSMUST00000118976 A030005L19RikA0A1Y7VIU2 113 aa5,63□□□□□ -1,51
Ccdc9-202ENSMUST00000118976 Kmt2dQ6PDK2 5588 aa5,63□□□□□ -1,51
Ccdc9-202ENSMUST00000118976 Gm39115A0A1B0GSH7 232 aa5,51□□□□□ -1,53
Ccdc9-202ENSMUST00000118976 1110025L11RikO09048 78 aa5,45□□□□□ -1,54
Ccdc9-202ENSMUST00000118976 Krtap6-5Q925H3 78 aa5,45□□□□□ -1,54
Ccdc9-202ENSMUST00000118976 Eppk1Q8R0W0 6548 aa5,33□□□□□ -1,56
Ccdc9-202ENSMUST00000118976 Sprr2bO70554 98 aa5,26□□□□□ -1,57
Ccdc9-202ENSMUST00000118976 DstQ91ZU6 7393 aaKnown RBP5,1□□□□□ -1,59
Ccdc9-202ENSMUST00000118976 Gm11639A0A1D5RLM8 5808 aa5,08□□□□□ -1,6
Ccdc9-202ENSMUST00000118976 Gpr98Q8VHN7 6298 aaKnown RBP5,06□□□□□ -1,6
Ccdc9-202ENSMUST00000118976 Muc19Q6PZE0 7524 aa4,99□□□□□ -1,61
Ccdc9-202ENSMUST00000118976 AhnakE9Q616 5656 aaKnown RBP4,85□□□□□ -1,63
Ccdc9-202ENSMUST00000118976 Gm45618A0A1B0GSA0 219 aa4,84□□□□□ -1,64
Ccdc9-202ENSMUST00000118976 Gm10229O08631 77 aa4,79□□□□□ -1,64
Ccdc9-202ENSMUST00000118976 A0A1Y7VJ07 166 aa4,75□□□□□ -1,65
Ccdc9-202ENSMUST00000118976 Phgr1Q8K0G7 91 aa4,65□□□□□ -1,67
Ccdc9-202ENSMUST00000118976 A0A286YCP9 139 aa4,6□□□□□ -1,67
Ccdc9-202ENSMUST00000118976 NebE9Q1W3 7152 aa4,56□□□□□ -1,68
Ccdc9-202ENSMUST00000118976 Krtap21-1Q925H4 128 aa4,53□□□□□ -1,68
Ccdc9-202ENSMUST00000118976 Gm29735A0A1B0GT06 219 aa4,44□□□□□ -1,7
Ccdc9-202ENSMUST00000118976 Gm11567Q9D141 195 aa4,38□□□□□ -1,71
Ccdc9-202ENSMUST00000118976 Krtap6-2O08884 159 aa3,95□□□□□ -1,78
Ccdc9-202ENSMUST00000118976 Krtap28-10A0A1Y7VP58 119 aa2,93□□□□□ -1,94
Ccdc9-202ENSMUST00000118976 A030003K21RikA0A1Y7VIM3 128 aa2,84□□□□□ -1,96
Ccdc9-202ENSMUST00000118976 Krtap5-1Q64507 230 aa2,81□□□□□ -1,96
Ccdc9-202ENSMUST00000118976 Krtap28-13A0A087WQP5 138 aa2,69□□□□□ -1,98
Ccdc9-202ENSMUST00000118976 Gm4559A4IF42 199 aa2,54□□□□□ -2
Ccdc9-202ENSMUST00000118976 Gm6217A0A1Y7VJK9 128 aa2,13□□□□□ -2,07
Ccdc9-202ENSMUST00000118976 A030005K14RikA0A1Y7VNY1 122 aa1,95□□□□□ -2,1
Ccdc9-202ENSMUST00000118976 A030014E15RikA0A1Y7VJV2 120 aa1,75□□□□□ -2,13
Ccdc9-202ENSMUST00000118976 Gm7544A0A1Y7VJ58 118 aa1,49□□□□□ -2,17
Retrieved 80 of 22,080 RNA–protein pairs in 9,5 ms