RNA–Protein interactions for RNA: ENSMUST00000116359.2

Ctc1-202, Transcript of CST complex subunit CTC1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ctc1, Length 3,978 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctc1-202ENSMUST00000116359 Lce1cQ9D1C5 147 aa3.48□□□□□ -1.85
Ctc1-202ENSMUST00000116359 Krtap6-3A0A087WQL6 57 aa3.46□□□□□ -1.85
Ctc1-202ENSMUST00000116359 Sprr2iO70560 76 aa3.46□□□□□ -1.85
Ctc1-202ENSMUST00000116359 2300003K06RikA2A4M0 262 aa3.44□□□□□ -1.86
Ctc1-202ENSMUST00000116359 Krtap4-7Q9D732 168 aa3.41□□□□□ -1.86
Ctc1-202ENSMUST00000116359 Gm10100J3QK64 120 aa3.4□□□□□ -1.86
Ctc1-202ENSMUST00000116359 Gm10272F7CZ33 110 aa3.39□□□□□ -1.87
Ctc1-202ENSMUST00000116359 Krtap22-2J3QNX6 67 aa3.38□□□□□ -1.87
Ctc1-202ENSMUST00000116359 Lce1fB9EJP6 147 aa3.37□□□□□ -1.87
Ctc1-202ENSMUST00000116359 Lce1a1Q9CQH5 143 aa3.37□□□□□ -1.87
Ctc1-202ENSMUST00000116359 Gm10142J3KMP7 120 aa3.35□□□□□ -1.87
Ctc1-202ENSMUST00000116359 Krtap31-2Q8CAY5 177 aa3.33□□□□□ -1.88
Ctc1-202ENSMUST00000116359 Lce3bQ9CQM7 98 aa3.29□□□□□ -1.88
Ctc1-202ENSMUST00000116359 Sprr2fO70557 76 aa3.28□□□□□ -1.88
Ctc1-202ENSMUST00000116359 Lce1bQ9D149 137 aa3.28□□□□□ -1.88
Ctc1-202ENSMUST00000116359 Macf1Q9QXZ0 7354 aaKnown RBP3.25□□□□□ -1.89
Ctc1-202ENSMUST00000116359 Lce3cQ91V05 98 aa3.23□□□□□ -1.89
Ctc1-202ENSMUST00000116359 Lce3dE9Q8V1 98 aa3.22□□□□□ -1.89
Ctc1-202ENSMUST00000116359 Krtap19-4Q925H7 84 aa3.2□□□□□ -1.9
Ctc1-202ENSMUST00000116359 Sprr2eO70556 76 aa3.19□□□□□ -1.9
Ctc1-202ENSMUST00000116359 Sprr2hO70559 108 aa3.18□□□□□ -1.9
Ctc1-202ENSMUST00000116359 Krtap4-16Q91W93 202 aa3.17□□□□□ -1.9
Ctc1-202ENSMUST00000116359 Lce3eF8VQJ0 98 aa3.15□□□□□ -1.9
Ctc1-202ENSMUST00000116359 Lce3fQ6PAI4 98 aa3.15□□□□□ -1.9
Ctc1-202ENSMUST00000116359 Syne1Q6ZWR6 8799 aa3.15□□□□□ -1.91
Ctc1-202ENSMUST00000116359 Krtap20-2E9Q0A8 60 aa3.12□□□□□ -1.91
Ctc1-202ENSMUST00000116359 Lce3aQ497I5 98 aa3.11□□□□□ -1.91
Ctc1-202ENSMUST00000116359 Gm11554B1AQB2 190 aa3.03□□□□□ -1.92
Ctc1-202ENSMUST00000116359 Eppk1Q8R0W0 6548 aa3.02□□□□□ -1.93
Ctc1-202ENSMUST00000116359 Muc16A0A140LJ72 8478 aa3.01□□□□□ -1.93
Ctc1-202ENSMUST00000116359 Lce1kJ3QP15 125 aa3.01□□□□□ -1.93
Ctc1-202ENSMUST00000116359 Gm11639A0A1D5RLM8 5808 aa2.91□□□□□ -1.94
Ctc1-202ENSMUST00000116359 ObscnA2AAJ9 8891 aaKnown RBP2.89□□□□□ -1.95
Ctc1-202ENSMUST00000116359 Gpr98Q8VHN7 6298 aaKnown RBP2.85□□□□□ -1.95
Ctc1-202ENSMUST00000116359 NebE9Q1W3 7152 aa2.84□□□□□ -1.95
Ctc1-202ENSMUST00000116359 Gm11559Q9D3H7 191 aa2.84□□□□□ -1.96
Ctc1-202ENSMUST00000116359 Gm10024A0A0A0MQA4 119 aa2.8□□□□□ -1.96
Ctc1-202ENSMUST00000116359 Muc19Q6PZE0 7524 aa2.79□□□□□ -1.96
Ctc1-202ENSMUST00000116359 Kmt2dQ6PDK2 5588 aa2.79□□□□□ -1.96
Ctc1-202ENSMUST00000116359 DstQ91ZU6 7393 aaKnown RBP2.78□□□□□ -1.96
Ctc1-202ENSMUST00000116359 Krtap5-2Q9D5Z7 189 aa2.74□□□□□ -1.97
Ctc1-202ENSMUST00000116359 A0A1Y7VJH8 109 aa2.73□□□□□ -1.97
Ctc1-202ENSMUST00000116359 Gm11568A2A4M2 211 aa2.72□□□□□ -1.97
Ctc1-202ENSMUST00000116359 Krtap9-1Q64526 186 aa2.72□□□□□ -1.97
Ctc1-202ENSMUST00000116359 A030005L19RikA0A1Y7VIU2 113 aa2.7□□□□□ -1.98
Ctc1-202ENSMUST00000116359 Hmcn1D3YXG0 5634 aa2.65□□□□□ -1.99
Ctc1-202ENSMUST00000116359 Gm4553A0A1B0GSA9 284 aa2.64□□□□□ -1.99
Ctc1-202ENSMUST00000116359 Gm2431E9Q8S1 172 aa2.59□□□□□ -2
Ctc1-202ENSMUST00000116359 Mt1P02802 61 aaKnown RBP2.55□□□□□ -2
Ctc1-202ENSMUST00000116359 Mt3P28184 68 aa2.47□□□□□ -2.01
Ctc1-202ENSMUST00000116359 Gm45337A0A1B0GS71 263 aa2.45□□□□□ -2.02
Ctc1-202ENSMUST00000116359 Gm10153A0A1B0GRL1 320 aa2.39□□□□□ -2.03
Ctc1-202ENSMUST00000116359 Gm40460A0A1B0GR10 244 aa2.34□□□□□ -2.03
Ctc1-202ENSMUST00000116359 Gm7579A0A1B0GRJ4 243 aa2.34□□□□□ -2.03
Ctc1-202ENSMUST00000116359 Gm39115A0A1B0GSH7 232 aa2.34□□□□□ -2.03
Ctc1-202ENSMUST00000116359 Krtap5-5Q2TA51 241 aa2.34□□□□□ -2.03
Ctc1-202ENSMUST00000116359 Krtap5-4Q62220 223 aa2.34□□□□□ -2.03
Ctc1-202ENSMUST00000116359 AhnakE9Q616 5656 aaKnown RBP2.34□□□□□ -2.03
Ctc1-202ENSMUST00000116359 Gm45618A0A1B0GSA0 219 aa2.2□□□□□ -2.06
Ctc1-202ENSMUST00000116359 A0A1Y7VLE6 161 aa2.19□□□□□ -2.06
Ctc1-202ENSMUST00000116359 1110025L11RikO09048 78 aa2.01□□□□□ -2.09
Ctc1-202ENSMUST00000116359 Krtap6-5Q925H3 78 aa2.01□□□□□ -2.09
Ctc1-202ENSMUST00000116359 A030005K14RikA0A1Y7VNY1 122 aa1.99□□□□□ -2.09
Ctc1-202ENSMUST00000116359 Krtap28-10A0A1Y7VP58 119 aa1.99□□□□□ -2.09
Ctc1-202ENSMUST00000116359 Sprr2bO70554 98 aa1.99□□□□□ -2.09
Ctc1-202ENSMUST00000116359 Krtap28-13A0A087WQP5 138 aa1.97□□□□□ -2.09
Ctc1-202ENSMUST00000116359 Phgr1Q8K0G7 91 aa1.92□□□□□ -2.1
Ctc1-202ENSMUST00000116359 Gm7544A0A1Y7VJ58 118 aa1.8□□□□□ -2.12
Ctc1-202ENSMUST00000116359 A0A286YCP9 139 aa1.78□□□□□ -2.12
Ctc1-202ENSMUST00000116359 Gm10229O08631 77 aa1.76□□□□□ -2.13
Ctc1-202ENSMUST00000116359 A0A1Y7VJ07 166 aa1.75□□□□□ -2.13
Ctc1-202ENSMUST00000116359 Gm11567Q9D141 195 aa1.73□□□□□ -2.13
Ctc1-202ENSMUST00000116359 Gm29735A0A1B0GT06 219 aa1.7□□□□□ -2.14
Ctc1-202ENSMUST00000116359 A030014E15RikA0A1Y7VJV2 120 aa1.69□□□□□ -2.14
Ctc1-202ENSMUST00000116359 Krtap21-1Q925H4 128 aa1.67□□□□□ -2.14
Ctc1-202ENSMUST00000116359 A030003K21RikA0A1Y7VIM3 128 aa1.51□□□□□ -2.17
Ctc1-202ENSMUST00000116359 Krtap6-2O08884 159 aa1.51□□□□□ -2.17
Ctc1-202ENSMUST00000116359 Krtap5-1Q64507 230 aa1.47□□□□□ -2.17
Ctc1-202ENSMUST00000116359 Gm6217A0A1Y7VJK9 128 aa1.46□□□□□ -2.18
Ctc1-202ENSMUST00000116359 Gm4559A4IF42 199 aa0.98□□□□□ -2.25
Retrieved 80 of 22,080 RNA–protein pairs in 45.3 ms