RNA–Protein interactions for RNA: ENSMUST00000109268.1

Ebf1-203, Transcript of Transcription factor COE1, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Ebf1, Length 2,864 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1-203ENSMUST00000109268 Lce1a1Q9CQH5 143 aa5.34□□□□□ -1.55
Ebf1-203ENSMUST00000109268 Syne1Q6ZWR6 8799 aa5.32□□□□□ -1.56
Ebf1-203ENSMUST00000109268 Gm10100J3QK64 120 aa5.31□□□□□ -1.56
Ebf1-203ENSMUST00000109268 Lce3bQ9CQM7 98 aa5.3□□□□□ -1.56
Ebf1-203ENSMUST00000109268 Gm38119A0A0A6YX29 146 aa5.24□□□□□ -1.57
Ebf1-203ENSMUST00000109268 A030003K21RikA0A1Y7VIM3 128 aa5.23□□□□□ -1.57
Ebf1-203ENSMUST00000109268 Gm6217A0A1Y7VJK9 128 aa5.23□□□□□ -1.57
Ebf1-203ENSMUST00000109268 Krtap19-4Q925H7 84 aa5.2□□□□□ -1.58
Ebf1-203ENSMUST00000109268 Gm10142J3KMP7 120 aa5.18□□□□□ -1.58
Ebf1-203ENSMUST00000109268 Krtap4-6Q3V4B7 195 aa5.17□□□□□ -1.58
Ebf1-203ENSMUST00000109268 Lce1gQ9D195 139 aa5.17□□□□□ -1.58
Ebf1-203ENSMUST00000109268 Lce3cQ91V05 98 aa5.07□□□□□ -1.6
Ebf1-203ENSMUST00000109268 Lce3dE9Q8V1 98 aa5.03□□□□□ -1.6
Ebf1-203ENSMUST00000109268 Fsip2A2ARZ3 6995 aa5.01□□□□□ -1.61
Ebf1-203ENSMUST00000109268 Lce3eF8VQJ0 98 aa4.96□□□□□ -1.62
Ebf1-203ENSMUST00000109268 Lce3fQ6PAI4 98 aa4.96□□□□□ -1.62
Ebf1-203ENSMUST00000109268 Sprr2hO70559 108 aa4.95□□□□□ -1.62
Ebf1-203ENSMUST00000109268 Mt4P47945 62 aa4.9□□□□□ -1.62
Ebf1-203ENSMUST00000109268 Sprr2iO70560 76 aa4.9□□□□□ -1.63
Ebf1-203ENSMUST00000109268 ObscnA2AAJ9 8891 aaKnown RBP4.89□□□□□ -1.63
Ebf1-203ENSMUST00000109268 Lce1lQ9D1G7 135 aa4.86□□□□□ -1.63
Ebf1-203ENSMUST00000109268 Gm11564A2A4L9 201 aa4.83□□□□□ -1.64
Ebf1-203ENSMUST00000109268 Gm11595B1AQA7 289 aa4.83□□□□□ -1.64
Ebf1-203ENSMUST00000109268 Krtap4-8B1AQA8 209 aa4.83□□□□□ -1.64
Ebf1-203ENSMUST00000109268 Lce3aQ497I5 98 aa4.82□□□□□ -1.64
Ebf1-203ENSMUST00000109268 Syne2Q6ZWQ0 6874 aaKnown RBP4.79□□□□□ -1.64
Ebf1-203ENSMUST00000109268 Gm11596B1AQB0 205 aa4.79□□□□□ -1.64
Ebf1-203ENSMUST00000109268 2300003K06RikA2A4M0 262 aa4.77□□□□□ -1.65
Ebf1-203ENSMUST00000109268 Krtap4-9B1AQA9 244 aa4.76□□□□□ -1.65
Ebf1-203ENSMUST00000109268 Sprr2eO70556 76 aa4.76□□□□□ -1.65
Ebf1-203ENSMUST00000109268 Krtap31-1Q9D644 177 aa4.71□□□□□ -1.65
Ebf1-203ENSMUST00000109268 Lce1bQ9D149 137 aa4.69□□□□□ -1.66
Ebf1-203ENSMUST00000109268 Sprr2fO70557 76 aa4.67□□□□□ -1.66
Ebf1-203ENSMUST00000109268 Krtap4-13Q9D7P3 165 aa4.63□□□□□ -1.67
Ebf1-203ENSMUST00000109268 Lce1kJ3QP15 125 aa4.62□□□□□ -1.67
Ebf1-203ENSMUST00000109268 Mt1P02802 61 aaKnown RBP4.59□□□□□ -1.67
Ebf1-203ENSMUST00000109268 Sprr2kO70562 68 aa4.58□□□□□ -1.68
Ebf1-203ENSMUST00000109268 Krtap4-16Q91W93 202 aa4.58□□□□□ -1.68
Ebf1-203ENSMUST00000109268 Gm11568A2A4M2 211 aa4.37□□□□□ -1.71
Ebf1-203ENSMUST00000109268 Krtap9-1Q64526 186 aa4.37□□□□□ -1.71
Ebf1-203ENSMUST00000109268 Muc16A0A140LJ72 8478 aa4.32□□□□□ -1.72
Ebf1-203ENSMUST00000109268 Krtap20-2E9Q0A8 60 aa4.31□□□□□ -1.72
Ebf1-203ENSMUST00000109268 Macf1Q9QXZ0 7354 aaKnown RBP4.26□□□□□ -1.73
Ebf1-203ENSMUST00000109268 Gm10024A0A0A0MQA4 119 aa4.21□□□□□ -1.73
Ebf1-203ENSMUST00000109268 Krtap5-2Q9D5Z7 189 aa4.1□□□□□ -1.75
Ebf1-203ENSMUST00000109268 Gm10153A0A1B0GRL1 320 aa4.04□□□□□ -1.76
Ebf1-203ENSMUST00000109268 Gm45618A0A1B0GSA0 219 aa4.01□□□□□ -1.77
Ebf1-203ENSMUST00000109268 Mt3P28184 68 aa4□□□□□ -1.77
Ebf1-203ENSMUST00000109268 Kmt2dQ6PDK2 5588 aa3.99□□□□□ -1.77
Ebf1-203ENSMUST00000109268 Hmcn1D3YXG0 5634 aa3.95□□□□□ -1.78
Ebf1-203ENSMUST00000109268 Gm39115A0A1B0GSH7 232 aa3.93□□□□□ -1.78
Ebf1-203ENSMUST00000109268 Krtap6-3A0A087WQL6 57 aa3.92□□□□□ -1.78
Ebf1-203ENSMUST00000109268 Krtap31-2Q8CAY5 177 aa3.92□□□□□ -1.78
Ebf1-203ENSMUST00000109268 Gm11567Q9D141 195 aa3.89□□□□□ -1.79
Ebf1-203ENSMUST00000109268 Gm11554B1AQB2 190 aa3.87□□□□□ -1.79
Ebf1-203ENSMUST00000109268 Gm2431E9Q8S1 172 aa3.8□□□□□ -1.8
Ebf1-203ENSMUST00000109268 Gm29735A0A1B0GT06 219 aa3.73□□□□□ -1.81
Ebf1-203ENSMUST00000109268 Muc19Q6PZE0 7524 aa3.72□□□□□ -1.81
Ebf1-203ENSMUST00000109268 Gm11559Q9D3H7 191 aa3.7□□□□□ -1.82
Ebf1-203ENSMUST00000109268 Gm45337A0A1B0GS71 263 aa3.7□□□□□ -1.82
Ebf1-203ENSMUST00000109268 Gm4553A0A1B0GSA9 284 aa3.69□□□□□ -1.82
Ebf1-203ENSMUST00000109268 Gm40460A0A1B0GR10 244 aa3.57□□□□□ -1.84
Ebf1-203ENSMUST00000109268 Gm7579A0A1B0GRJ4 243 aa3.57□□□□□ -1.84
Ebf1-203ENSMUST00000109268 Krtap5-5Q2TA51 241 aa3.57□□□□□ -1.84
Ebf1-203ENSMUST00000109268 Krtap5-4Q62220 223 aa3.57□□□□□ -1.84
Ebf1-203ENSMUST00000109268 1110025L11RikO09048 78 aa3.53□□□□□ -1.84
Ebf1-203ENSMUST00000109268 Krtap6-5Q925H3 78 aa3.53□□□□□ -1.84
Ebf1-203ENSMUST00000109268 DstQ91ZU6 7393 aaKnown RBP3.47□□□□□ -1.85
Ebf1-203ENSMUST00000109268 Gm11639A0A1D5RLM8 5808 aa3.34□□□□□ -1.88
Ebf1-203ENSMUST00000109268 AhnakE9Q616 5656 aaKnown RBP3.18□□□□□ -1.9
Ebf1-203ENSMUST00000109268 Sprr2bO70554 98 aa3.15□□□□□ -1.9
Ebf1-203ENSMUST00000109268 Gm10229O08631 77 aa3.12□□□□□ -1.91
Ebf1-203ENSMUST00000109268 NebE9Q1W3 7152 aa3.09□□□□□ -1.91
Ebf1-203ENSMUST00000109268 Gpr98Q8VHN7 6298 aaKnown RBP3.06□□□□□ -1.92
Ebf1-203ENSMUST00000109268 Eppk1Q8R0W0 6548 aa3□□□□□ -1.93
Ebf1-203ENSMUST00000109268 Phgr1Q8K0G7 91 aa2.92□□□□□ -1.94
Ebf1-203ENSMUST00000109268 Krtap21-1Q925H4 128 aa2.91□□□□□ -1.94
Ebf1-203ENSMUST00000109268 Krtap6-2O08884 159 aa2.61□□□□□ -1.99
Ebf1-203ENSMUST00000109268 Krtap5-1Q64507 230 aa2.58□□□□□ -2
Ebf1-203ENSMUST00000109268 Gm4559A4IF42 199 aa2.55□□□□□ -2
Retrieved 80 of 22,080 RNA–protein pairs in 11.2 ms