RNA–Protein interactions for RNA: ENSMUST00000109013.8

Shroom1-204, Transcript of Protein Shroom1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Shroom1, Length 3,312 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1-204ENSMUST00000109013 Lce3fQ6PAI4 98 aa4.76□□□□□ -1.65
Shroom1-204ENSMUST00000109013 Gm11564A2A4L9 201 aa4.75□□□□□ -1.65
Shroom1-204ENSMUST00000109013 Gm11563B1AQ90 168 aa4.75□□□□□ -1.65
Shroom1-204ENSMUST00000109013 Gm11595B1AQA7 289 aa4.75□□□□□ -1.65
Shroom1-204ENSMUST00000109013 Krtap4-8B1AQA8 209 aa4.75□□□□□ -1.65
Shroom1-204ENSMUST00000109013 Krtap19-4Q925H7 84 aa4.75□□□□□ -1.65
Shroom1-204ENSMUST00000109013 Lce3dE9Q8V1 98 aa4.74□□□□□ -1.65
Shroom1-204ENSMUST00000109013 Gm11596B1AQB0 205 aa4.73□□□□□ -1.65
Shroom1-204ENSMUST00000109013 ObscnA2AAJ9 8891 aaKnown RBP4.73□□□□□ -1.65
Shroom1-204ENSMUST00000109013 Muc16A0A140LJ72 8478 aa4.72□□□□□ -1.65
Shroom1-204ENSMUST00000109013 Krtap4-9B1AQA9 244 aa4.72□□□□□ -1.65
Shroom1-204ENSMUST00000109013 Sprr2kO70562 68 aa4.68□□□□□ -1.66
Shroom1-204ENSMUST00000109013 Gm11555B1AQ89 175 aa4.66□□□□□ -1.66
Shroom1-204ENSMUST00000109013 Krtap4-13Q9D7P3 165 aa4.61□□□□□ -1.67
Shroom1-204ENSMUST00000109013 2300003K06RikA2A4M0 262 aa4.58□□□□□ -1.68
Shroom1-204ENSMUST00000109013 Lce1bQ9D149 137 aa4.56□□□□□ -1.68
Shroom1-204ENSMUST00000109013 Lce3aQ497I5 98 aa4.53□□□□□ -1.68
Shroom1-204ENSMUST00000109013 Macf1Q9QXZ0 7354 aaKnown RBP4.52□□□□□ -1.69
Shroom1-204ENSMUST00000109013 Lce1lQ9D1G7 135 aa4.51□□□□□ -1.69
Shroom1-204ENSMUST00000109013 Sprr2hO70559 108 aa4.49□□□□□ -1.69
Shroom1-204ENSMUST00000109013 Lce1kJ3QP15 125 aa4.49□□□□□ -1.69
Shroom1-204ENSMUST00000109013 Krtap4-7Q9D732 168 aa4.41□□□□□ -1.7
Shroom1-204ENSMUST00000109013 Sprr2iO70560 76 aa4.39□□□□□ -1.71
Shroom1-204ENSMUST00000109013 Krtap31-1Q9D644 177 aa4.34□□□□□ -1.71
Shroom1-204ENSMUST00000109013 Krtap4-16Q91W93 202 aa4.3□□□□□ -1.72
Shroom1-204ENSMUST00000109013 Mt1P02802 61 aaKnown RBP4.28□□□□□ -1.72
Shroom1-204ENSMUST00000109013 Sprr2eO70556 76 aa4.24□□□□□ -1.73
Shroom1-204ENSMUST00000109013 Krtap20-2E9Q0A8 60 aa4.2□□□□□ -1.74
Shroom1-204ENSMUST00000109013 Sprr2fO70557 76 aa4.18□□□□□ -1.74
Shroom1-204ENSMUST00000109013 Gm11568A2A4M2 211 aa4.09□□□□□ -1.75
Shroom1-204ENSMUST00000109013 Krtap9-1Q64526 186 aa4.09□□□□□ -1.75
Shroom1-204ENSMUST00000109013 Muc19Q6PZE0 7524 aa4.06□□□□□ -1.76
Shroom1-204ENSMUST00000109013 Kmt2dQ6PDK2 5588 aa4.02□□□□□ -1.77
Shroom1-204ENSMUST00000109013 Gm10024A0A0A0MQA4 119 aa4.01□□□□□ -1.77
Shroom1-204ENSMUST00000109013 Hmcn1D3YXG0 5634 aa3.89□□□□□ -1.79
Shroom1-204ENSMUST00000109013 A0A1Y7VJH8 109 aa3.88□□□□□ -1.79
Shroom1-204ENSMUST00000109013 Krtap6-3A0A087WQL6 57 aa3.83□□□□□ -1.8
Shroom1-204ENSMUST00000109013 Gm11554B1AQB2 190 aa3.82□□□□□ -1.8
Shroom1-204ENSMUST00000109013 Mt3P28184 68 aa3.8□□□□□ -1.8
Shroom1-204ENSMUST00000109013 Krtap5-2Q9D5Z7 189 aa3.77□□□□□ -1.81
Shroom1-204ENSMUST00000109013 DstQ91ZU6 7393 aaKnown RBP3.73□□□□□ -1.81
Shroom1-204ENSMUST00000109013 Krtap31-2Q8CAY5 177 aa3.71□□□□□ -1.82
Shroom1-204ENSMUST00000109013 Gm10153A0A1B0GRL1 320 aa3.67□□□□□ -1.82
Shroom1-204ENSMUST00000109013 A0A1Y7VLE6 161 aa3.59□□□□□ -1.84
Shroom1-204ENSMUST00000109013 Gm11559Q9D3H7 191 aa3.53□□□□□ -1.84
Shroom1-204ENSMUST00000109013 NebE9Q1W3 7152 aa3.49□□□□□ -1.85
Shroom1-204ENSMUST00000109013 Gm4553A0A1B0GSA9 284 aa3.42□□□□□ -1.86
Shroom1-204ENSMUST00000109013 Gm2431E9Q8S1 172 aa3.42□□□□□ -1.86
Shroom1-204ENSMUST00000109013 Gm45337A0A1B0GS71 263 aa3.35□□□□□ -1.87
Shroom1-204ENSMUST00000109013 Gm11639A0A1D5RLM8 5808 aa3.34□□□□□ -1.87
Shroom1-204ENSMUST00000109013 1110025L11RikO09048 78 aa3.29□□□□□ -1.88
Shroom1-204ENSMUST00000109013 Krtap6-5Q925H3 78 aa3.29□□□□□ -1.88
Shroom1-204ENSMUST00000109013 Gm40460A0A1B0GR10 244 aa3.21□□□□□ -1.9
Shroom1-204ENSMUST00000109013 Gm7579A0A1B0GRJ4 243 aa3.21□□□□□ -1.9
Shroom1-204ENSMUST00000109013 Krtap5-5Q2TA51 241 aa3.21□□□□□ -1.9
Shroom1-204ENSMUST00000109013 Krtap5-4Q62220 223 aa3.21□□□□□ -1.9
Shroom1-204ENSMUST00000109013 Eppk1Q8R0W0 6548 aa3.07□□□□□ -1.92
Shroom1-204ENSMUST00000109013 AhnakE9Q616 5656 aaKnown RBP3.05□□□□□ -1.92
Shroom1-204ENSMUST00000109013 Gm39115A0A1B0GSH7 232 aa2.93□□□□□ -1.94
Shroom1-204ENSMUST00000109013 Gm10229O08631 77 aa2.93□□□□□ -1.94
Shroom1-204ENSMUST00000109013 A030005L19RikA0A1Y7VIU2 113 aa2.87□□□□□ -1.95
Shroom1-204ENSMUST00000109013 Sprr2bO70554 98 aa2.83□□□□□ -1.96
Shroom1-204ENSMUST00000109013 Gpr98Q8VHN7 6298 aaKnown RBP2.83□□□□□ -1.96
Shroom1-204ENSMUST00000109013 Gm11567Q9D141 195 aa2.77□□□□□ -1.97
Shroom1-204ENSMUST00000109013 A0A1Y7VJ07 166 aa2.74□□□□□ -1.97
Shroom1-204ENSMUST00000109013 Phgr1Q8K0G7 91 aa2.7□□□□□ -1.98
Shroom1-204ENSMUST00000109013 Krtap21-1Q925H4 128 aa2.66□□□□□ -1.98
Shroom1-204ENSMUST00000109013 A0A286YCP9 139 aa2.51□□□□□ -2.01
Shroom1-204ENSMUST00000109013 Krtap6-2O08884 159 aa2.47□□□□□ -2.01
Shroom1-204ENSMUST00000109013 Gm29735A0A1B0GT06 219 aa2.41□□□□□ -2.02
Shroom1-204ENSMUST00000109013 Gm45618A0A1B0GSA0 219 aa2.41□□□□□ -2.02
Shroom1-204ENSMUST00000109013 Krtap28-10A0A1Y7VP58 119 aa2.35□□□□□ -2.03
Shroom1-204ENSMUST00000109013 Krtap28-13A0A087WQP5 138 aa2.26□□□□□ -2.05
Shroom1-204ENSMUST00000109013 A030005K14RikA0A1Y7VNY1 122 aa2.19□□□□□ -2.06
Shroom1-204ENSMUST00000109013 Gm7544A0A1Y7VJ58 118 aa2.03□□□□□ -2.08
Shroom1-204ENSMUST00000109013 A030014E15RikA0A1Y7VJV2 120 aa1.91□□□□□ -2.1
Shroom1-204ENSMUST00000109013 A030003K21RikA0A1Y7VIM3 128 aa1.78□□□□□ -2.12
Shroom1-204ENSMUST00000109013 Gm6217A0A1Y7VJK9 128 aa1.67□□□□□ -2.14
Shroom1-204ENSMUST00000109013 Krtap5-1Q64507 230 aa1.58□□□□□ -2.16
Shroom1-204ENSMUST00000109013 Gm4559A4IF42 199 aa1.41□□□□□ -2.18
Retrieved 80 of 22,080 RNA–protein pairs in 74 ms