RNA–Protein interactions for RNA: ENSMUST00000106441.7

Trim47-202, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim47, Length 2,192 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-202ENSMUST00000106441 Krtap6-3A0A087WQL6 57 aa6.3□□□□□ -1.4
Trim47-202ENSMUST00000106441 Lce1eQ9D139 143 aa6.3□□□□□ -1.4
Trim47-202ENSMUST00000106441 Krtap4-7Q9D732 168 aa6.2□□□□□ -1.42
Trim47-202ENSMUST00000106441 Gm10272F7CZ33 110 aa6.19□□□□□ -1.42
Trim47-202ENSMUST00000106441 Lce1lQ9D1G7 135 aa6.16□□□□□ -1.42
Trim47-202ENSMUST00000106441 Krtap19-4Q925H7 84 aa5.93□□□□□ -1.46
Trim47-202ENSMUST00000106441 Lce1cQ9D1C5 147 aa5.92□□□□□ -1.46
Trim47-202ENSMUST00000106441 Lce3bQ9CQM7 98 aa5.89□□□□□ -1.47
Trim47-202ENSMUST00000106441 Syne1Q6ZWR6 8799 aa5.88□□□□□ -1.47
Trim47-202ENSMUST00000106441 Sprr2iO70560 76 aa5.84□□□□□ -1.47
Trim47-202ENSMUST00000106441 A0A1Y7VJH8 109 aa5.82□□□□□ -1.48
Trim47-202ENSMUST00000106441 Gm10100J3QK64 120 aa5.82□□□□□ -1.48
Trim47-202ENSMUST00000106441 Lce1a1Q9CQH5 143 aa5.8□□□□□ -1.48
Trim47-202ENSMUST00000106441 Krtap20-2E9Q0A8 60 aa5.78□□□□□ -1.48
Trim47-202ENSMUST00000106441 Lce1kJ3QP15 125 aa5.75□□□□□ -1.49
Trim47-202ENSMUST00000106441 Gm10142J3KMP7 120 aa5.73□□□□□ -1.49
Trim47-202ENSMUST00000106441 Lce1fB9EJP6 147 aa5.7□□□□□ -1.5
Trim47-202ENSMUST00000106441 Krtap5-2Q9D5Z7 189 aa5.7□□□□□ -1.5
Trim47-202ENSMUST00000106441 Sprr2eO70556 76 aa5.57□□□□□ -1.52
Trim47-202ENSMUST00000106441 Gm11568A2A4M2 211 aa5.57□□□□□ -1.52
Trim47-202ENSMUST00000106441 Krtap9-1Q64526 186 aa5.57□□□□□ -1.52
Trim47-202ENSMUST00000106441 Sprr2hO70559 108 aa5.56□□□□□ -1.52
Trim47-202ENSMUST00000106441 Lce3cQ91V05 98 aa5.54□□□□□ -1.52
Trim47-202ENSMUST00000106441 Sprr2fO70557 76 aa5.53□□□□□ -1.52
Trim47-202ENSMUST00000106441 Lce3dE9Q8V1 98 aa5.5□□□□□ -1.53
Trim47-202ENSMUST00000106441 Gm11559Q9D3H7 191 aa5.44□□□□□ -1.54
Trim47-202ENSMUST00000106441 Lce3eF8VQJ0 98 aa5.41□□□□□ -1.54
Trim47-202ENSMUST00000106441 Mt1P02802 61 aaKnown RBP5.41□□□□□ -1.54
Trim47-202ENSMUST00000106441 Lce3fQ6PAI4 98 aa5.41□□□□□ -1.54
Trim47-202ENSMUST00000106441 Gm4553A0A1B0GSA9 284 aa5.36□□□□□ -1.55
Trim47-202ENSMUST00000106441 Macf1Q9QXZ0 7354 aaKnown RBP5.34□□□□□ -1.56
Trim47-202ENSMUST00000106441 Lce3aQ497I5 98 aa5.32□□□□□ -1.56
Trim47-202ENSMUST00000106441 Gm11554B1AQB2 190 aa5.3□□□□□ -1.56
Trim47-202ENSMUST00000106441 Krtap31-1Q9D644 177 aa5.28□□□□□ -1.56
Trim47-202ENSMUST00000106441 Gm10153A0A1B0GRL1 320 aa5.22□□□□□ -1.57
Trim47-202ENSMUST00000106441 Gm45337A0A1B0GS71 263 aa5.21□□□□□ -1.58
Trim47-202ENSMUST00000106441 ObscnA2AAJ9 8891 aaKnown RBP5.2□□□□□ -1.58
Trim47-202ENSMUST00000106441 Gm2431E9Q8S1 172 aa5.19□□□□□ -1.58
Trim47-202ENSMUST00000106441 A030005L19RikA0A1Y7VIU2 113 aa5.18□□□□□ -1.58
Trim47-202ENSMUST00000106441 Kmt2dQ6PDK2 5588 aa5.15□□□□□ -1.59
Trim47-202ENSMUST00000106441 Krtap31-2Q8CAY5 177 aa5.1□□□□□ -1.59
Trim47-202ENSMUST00000106441 Eppk1Q8R0W0 6548 aa5.08□□□□□ -1.6
Trim47-202ENSMUST00000106441 Gm40460A0A1B0GR10 244 aa5.04□□□□□ -1.6
Trim47-202ENSMUST00000106441 Gm7579A0A1B0GRJ4 243 aa5.04□□□□□ -1.6
Trim47-202ENSMUST00000106441 Krtap5-5Q2TA51 241 aa5.04□□□□□ -1.6
Trim47-202ENSMUST00000106441 Krtap5-4Q62220 223 aa5.04□□□□□ -1.6
Trim47-202ENSMUST00000106441 Hmcn1D3YXG0 5634 aa5.03□□□□□ -1.6
Trim47-202ENSMUST00000106441 Krtap4-16Q91W93 202 aa4.96□□□□□ -1.62
Trim47-202ENSMUST00000106441 Mt3P28184 68 aa4.94□□□□□ -1.62
Trim47-202ENSMUST00000106441 Gm39115A0A1B0GSH7 232 aa4.85□□□□□ -1.63
Trim47-202ENSMUST00000106441 Muc19Q6PZE0 7524 aa4.82□□□□□ -1.64
Trim47-202ENSMUST00000106441 Gm11639A0A1D5RLM8 5808 aa4.77□□□□□ -1.65
Trim47-202ENSMUST00000106441 DstQ91ZU6 7393 aaKnown RBP4.72□□□□□ -1.65
Trim47-202ENSMUST00000106441 A0A1Y7VLE6 161 aa4.71□□□□□ -1.66
Trim47-202ENSMUST00000106441 Gm10024A0A0A0MQA4 119 aa4.65□□□□□ -1.66
Trim47-202ENSMUST00000106441 Gpr98Q8VHN7 6298 aaKnown RBP4.42□□□□□ -1.7
Trim47-202ENSMUST00000106441 NebE9Q1W3 7152 aa4.41□□□□□ -1.7
Trim47-202ENSMUST00000106441 Gm45618A0A1B0GSA0 219 aa4.39□□□□□ -1.71
Trim47-202ENSMUST00000106441 AhnakE9Q616 5656 aaKnown RBP4.39□□□□□ -1.71
Trim47-202ENSMUST00000106441 1110025L11RikO09048 78 aa3.97□□□□□ -1.77
Trim47-202ENSMUST00000106441 Krtap6-5Q925H3 78 aa3.97□□□□□ -1.77
Trim47-202ENSMUST00000106441 Muc16A0A140LJ72 8478 aa3.95□□□□□ -1.78
Trim47-202ENSMUST00000106441 A0A1Y7VJ07 166 aa3.9□□□□□ -1.79
Trim47-202ENSMUST00000106441 Sprr2bO70554 98 aa3.8□□□□□ -1.8
Trim47-202ENSMUST00000106441 Gm29735A0A1B0GT06 219 aa3.75□□□□□ -1.81
Trim47-202ENSMUST00000106441 Gm11567Q9D141 195 aa3.61□□□□□ -1.83
Trim47-202ENSMUST00000106441 Gm10229O08631 77 aa3.55□□□□□ -1.84
Trim47-202ENSMUST00000106441 Phgr1Q8K0G7 91 aa3.26□□□□□ -1.89
Trim47-202ENSMUST00000106441 Krtap21-1Q925H4 128 aa3.26□□□□□ -1.89
Trim47-202ENSMUST00000106441 A0A286YCP9 139 aa3.18□□□□□ -1.9
Trim47-202ENSMUST00000106441 Krtap6-2O08884 159 aa3.1□□□□□ -1.91
Trim47-202ENSMUST00000106441 A030003K21RikA0A1Y7VIM3 128 aa2.76□□□□□ -1.97
Trim47-202ENSMUST00000106441 Krtap5-1Q64507 230 aa2.66□□□□□ -1.98
Trim47-202ENSMUST00000106441 Gm7544A0A1Y7VJ58 118 aa2.46□□□□□ -2.02
Trim47-202ENSMUST00000106441 Krtap28-10A0A1Y7VP58 119 aa2.28□□□□□ -2.04
Trim47-202ENSMUST00000106441 Gm6217A0A1Y7VJK9 128 aa2.2□□□□□ -2.06
Trim47-202ENSMUST00000106441 Gm4559A4IF42 199 aa2.16□□□□□ -2.06
Trim47-202ENSMUST00000106441 A030005K14RikA0A1Y7VNY1 122 aa2.13□□□□□ -2.07
Trim47-202ENSMUST00000106441 Krtap28-13A0A087WQP5 138 aa2.1□□□□□ -2.07
Trim47-202ENSMUST00000106441 A030014E15RikA0A1Y7VJV2 120 aa1.55□□□□□ -2.16
Retrieved 80 of 22,080 RNA–protein pairs in 184.2 ms